RNA–Protein interactions for RNA: ENST00000640056.1

HNRNPU-224, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-224ENST00000640056 KIF18AQ8NI77 898 aa11.71□□□□□ -0.53
HNRNPU-224ENST00000640056 BRF1Q92994 677 aa11.71□□□□□ -0.53
HNRNPU-224ENST00000640056 BCS1LQ9Y276 419 aa11.71□□□□□ -0.53
HNRNPU-224ENST00000640056 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.71□□□□□ -0.53
HNRNPU-224ENST00000640056 GRM8O00222 908 aa11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 JAK2O60674 1132 aa11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 SKILP12757 684 aa11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 CWF19L2Q2TBE0 894 aaKnown RBP11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 ZNF589Q86UQ0 364 aaPredicted RBP11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 LINS1Q8NG48 757 aa11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 ZNF592Q92610 1267 aa11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 KAZALD1Q96I82 304 aa11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 NEK1Q96PY6 1258 aa11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 KCND1Q9NSA2 647 aa11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 RCOR1Q9UKL0 485 aa11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 IGSF3O75054 1194 aa11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 SERPINB2P05120 415 aa11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 KCNA3P22001 575 aa11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 FSTL1Q12841 308 aa11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 DALRD3Q5D0E6 543 aaKnown RBP11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 ZNF771Q7L3S4 317 aaPredicted RBP11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 ZNF397Q8NF99 534 aaPredicted RBP11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 SUCLG2Q96I99 432 aa11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 SIPA1L3O60292 1781 aaPredicted RBP11.7□□□□□ -0.54
HNRNPU-224ENST00000640056 BECN2A8MW95 431 aa11.69□□□□□ -0.54
HNRNPU-224ENST00000640056 ADD1P35611 737 aaKnown RBP11.69□□□□□ -0.54
HNRNPU-224ENST00000640056 CLEC4GQ6UXB4 293 aa11.69□□□□□ -0.54
HNRNPU-224ENST00000640056 C11orf57Q6ZUT1 292 aaPredicted RBP11.69□□□□□ -0.54
HNRNPU-224ENST00000640056 SMARCC2Q8TAQ2 1214 aa11.69□□□□□ -0.54
HNRNPU-224ENST00000640056 DDX11Q96FC9 970 aa11.69□□□□□ -0.54
HNRNPU-224ENST00000640056 LLPHQ9BRT6 129 aaKnown RBP11.69□□□□□ -0.54
HNRNPU-224ENST00000640056 BICC1Q9H694 974 aaKnown RBP11.69□□□□□ -0.54
HNRNPU-224ENST00000640056 TLR7Q9NYK1 1049 aaKnown RBP11.69□□□□□ -0.54
HNRNPU-224ENST00000640056 USP27XA6NNY8 438 aa11.69□□□□□ -0.54
HNRNPU-224ENST00000640056 SLFN14P0C7P3 912 aa11.69□□□□□ -0.54
HNRNPU-224ENST00000640056 ARID5BQ14865 1188 aa11.69□□□□□ -0.54
HNRNPU-224ENST00000640056 ATL3Q6DD88 541 aa11.69□□□□□ -0.54
HNRNPU-224ENST00000640056 Q6ZUG5 572 aa11.69□□□□□ -0.54
HNRNPU-224ENST00000640056 CCAR1Q8IX12 1150 aaKnown RBP11.69□□□□□ -0.54
HNRNPU-224ENST00000640056 ERO1AQ96HE7 468 aa11.69□□□□□ -0.54
HNRNPU-224ENST00000640056 ANO10Q9NW15 660 aa11.69□□□□□ -0.54
HNRNPU-224ENST00000640056 CARMIL3Q8ND23 1372 aa11.68□□□□□ -0.54
HNRNPU-224ENST00000640056 KDM3BQ7LBC6 1761 aa11.68□□□□□ -0.54
HNRNPU-224ENST00000640056 KIAA1551Q9HCM1 1747 aa11.68□□□□□ -0.54
HNRNPU-224ENST00000640056 CCDC69A6NI79 296 aa11.68□□□□□ -0.54
HNRNPU-224ENST00000640056 KIF2AO00139 706 aaPredicted RBP11.68□□□□□ -0.54
HNRNPU-224ENST00000640056 CCZ1BP86790 482 aa11.68□□□□□ -0.54
HNRNPU-224ENST00000640056 CCZ1P86791 482 aaPredicted RBP11.68□□□□□ -0.54
HNRNPU-224ENST00000640056 SNW1Q13573 536 aaKnown RBP11.68□□□□□ -0.54
HNRNPU-224ENST00000640056 PROSER3Q2NL68 480 aa11.68□□□□□ -0.54
HNRNPU-224ENST00000640056 NAA16Q6N069 864 aaPredicted RBP11.68□□□□□ -0.54
HNRNPU-224ENST00000640056 DHX40Q8IX18 779 aaKnown RBP11.68□□□□□ -0.54
HNRNPU-224ENST00000640056 KRT222Q8N1A0 295 aa11.68□□□□□ -0.54
HNRNPU-224ENST00000640056 FAM53CQ9NYF3 392 aa11.68□□□□□ -0.54
HNRNPU-224ENST00000640056 ZNF215Q9UL58 517 aaPredicted RBP11.68□□□□□ -0.54
HNRNPU-224ENST00000640056 ZNF652Q9Y2D9 606 aa11.68□□□□□ -0.54
HNRNPU-224ENST00000640056 U3KPZ7 1027 aaPredicted RBP11.68□□□□□ -0.54
HNRNPU-224ENST00000640056 DDX58O95786 925 aaKnown RBP11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 A1BGP04217 495 aa11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 SLFNL1Q499Z3 407 aa11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 KMT5BQ4FZB7 885 aa11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 CCAR2Q8N163 923 aaKnown RBP11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 USP16Q9Y5T5 823 aa11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 PFKFB2O60825 505 aa11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 CAMTA2O94983 1202 aa11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 HSP90B1P14625 803 aaKnown RBP11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 ATP5JP18859 108 aa11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 PDE6BP35913 854 aa11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 GSDMDP57764 484 aa11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 SCRN1Q12765 414 aa11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 TERF2Q15554 542 aa11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 CCDC73Q6ZRK6 1079 aa11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 FILIP1Q7Z7B0 1213 aa11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 DZIP3Q86Y13 1208 aaKnown RBP11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 ENGASEQ8NFI3 743 aa11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 BRIP1Q9BX63 1249 aa11.67□□□□□ -0.54
HNRNPU-224ENST00000640056 KINO60870 393 aaKnown RBP11.66□□□□□ -0.54
HNRNPU-224ENST00000640056 SLU7O95391 586 aaKnown RBP11.66□□□□□ -0.54
HNRNPU-224ENST00000640056 CEBPZQ03701 1054 aaKnown RBP11.66□□□□□ -0.54
HNRNPU-224ENST00000640056 FAM160A1Q05DH4 1040 aa11.66□□□□□ -0.54
HNRNPU-224ENST00000640056 ARHGAP27Q6ZUM4 889 aa11.66□□□□□ -0.54
HNRNPU-224ENST00000640056 ZNF396Q96N95 335 aaPredicted RBP11.66□□□□□ -0.54
HNRNPU-224ENST00000640056 SETDB2Q96T68 719 aa11.66□□□□□ -0.54
HNRNPU-224ENST00000640056 NAT10Q9H0A0 1025 aaKnown RBP11.66□□□□□ -0.54
HNRNPU-224ENST00000640056 SIL1Q9H173 461 aa11.66□□□□□ -0.54
HNRNPU-224ENST00000640056 GOLPH3LQ9H4A5 285 aa11.66□□□□□ -0.54
HNRNPU-224ENST00000640056 IMPACTQ9P2X3 320 aa11.66□□□□□ -0.54
HNRNPU-224ENST00000640056 TBC1D2BQ9UPU7 963 aa11.66□□□□□ -0.54
HNRNPU-224ENST00000640056 NRXN2Q9P2S2 1712 aa11.66□□□□□ -0.54
HNRNPU-224ENST00000640056 H0YIN7 160 aa11.65□□□□□ -0.54
HNRNPU-224ENST00000640056 HMGB1P09429 215 aaKnown RBP11.65□□□□□ -0.54
HNRNPU-224ENST00000640056 TBC1D9BQ66K14 1250 aa11.65□□□□□ -0.54
HNRNPU-224ENST00000640056 CEP57L1Q8IYX8 460 aa11.65□□□□□ -0.54
HNRNPU-224ENST00000640056 OSBPL5Q9H0X9 879 aaPredicted RBP11.65□□□□□ -0.54
HNRNPU-224ENST00000640056 PODXL2Q9NZ53 605 aa11.65□□□□□ -0.54
HNRNPU-224ENST00000640056 ZNF330Q9Y3S2 320 aaPredicted RBP11.65□□□□□ -0.54
HNRNPU-224ENST00000640056 ZC3H4Q9UPT8 1303 aaKnown RBP11.65□□□□□ -0.54
HNRNPU-224ENST00000640056 CYP21A2P08686 494 aa11.65□□□□□ -0.54
HNRNPU-224ENST00000640056 FAM193AP78312 1265 aa11.65□□□□□ -0.54
HNRNPU-224ENST00000640056 NSUN7Q8NE18 718 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 324.6 ms