RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 WDR93Q6P2C0 686 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 SPATS2Q86XZ4 545 aaKnown RBP13.76□□□□□ -0.21
CAPN3-221ENST00000638141 FMR1NBQ8N0W7 255 aaPredicted RBP13.76□□□□□ -0.21
CAPN3-221ENST00000638141 CCDC102AQ96A19 550 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 EVI5LQ96CN4 794 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 PNKPQ96T60 521 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 AMOTL2Q9Y2J4 779 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 RNF40O75150 1001 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 FSBPO95073 299 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 GCFC2P16383 781 aaKnown RBP13.76□□□□□ -0.21
CAPN3-221ENST00000638141 SCRN1Q12765 414 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 FLIIQ13045 1269 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 SAFB2Q14151 953 aaKnown RBP eCLIP13.76□□□□□ -0.21
CAPN3-221ENST00000638141 KRT32Q14532 448 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 CRYMQ14894 314 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 TEX11Q8IYF3 940 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 VEZTQ9HBM0 779 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 RBM8AQ9Y5S9 174 aaKnown RBP13.76□□□□□ -0.21
CAPN3-221ENST00000638141 AKAP12Q02952 1782 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 KCNA6P17658 529 aa13.75□□□□□ -0.21
CAPN3-221ENST00000638141 INPP5BP32019 993 aa13.75□□□□□ -0.21
CAPN3-221ENST00000638141 KIF4BQ2VIQ3 1234 aa13.75□□□□□ -0.21
CAPN3-221ENST00000638141 FAM212AQ96EL1 285 aa13.75□□□□□ -0.21
CAPN3-221ENST00000638141 RBM33Q96EV2 1170 aaKnown RBP13.75□□□□□ -0.21
CAPN3-221ENST00000638141 IL1RAPL2Q9NP60 686 aa13.75□□□□□ -0.21
CAPN3-221ENST00000638141 SBNO1A3KN83 1393 aa13.75□□□□□ -0.21
CAPN3-221ENST00000638141 WDHD1O75717 1129 aaPredicted RBP13.75□□□□□ -0.21
CAPN3-221ENST00000638141 DPCR1Q3MIW9 517 aa13.75□□□□□ -0.21
CAPN3-221ENST00000638141 WLSQ5T9L3 541 aa13.75□□□□□ -0.21
CAPN3-221ENST00000638141 COG3Q96JB2 828 aa13.75□□□□□ -0.21
CAPN3-221ENST00000638141 CDHR2Q9BYE9 1310 aa13.75□□□□□ -0.21
CAPN3-221ENST00000638141 ANKRD33BA6NCL7 494 aa13.74□□□□□ -0.21
CAPN3-221ENST00000638141 A6NNZ2 444 aa13.74□□□□□ -0.21
CAPN3-221ENST00000638141 SLC27A2O14975 620 aa13.74□□□□□ -0.21
CAPN3-221ENST00000638141 SURF6O75683 361 aaKnown RBP13.74□□□□□ -0.21
CAPN3-221ENST00000638141 SYF2O95926 243 aaKnown RBP13.74□□□□□ -0.21
CAPN3-221ENST00000638141 FNTAP49354 379 aa13.74□□□□□ -0.21
CAPN3-221ENST00000638141 TBX2Q13207 712 aaPredicted RBP13.74□□□□□ -0.21
CAPN3-221ENST00000638141 TUBB8Q3ZCM7 444 aa13.74□□□□□ -0.21
CAPN3-221ENST00000638141 FBXW10Q5XX13 1052 aa13.74□□□□□ -0.21
CAPN3-221ENST00000638141 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.74□□□□□ -0.21
CAPN3-221ENST00000638141 FSIP1Q8NA03 581 aa13.74□□□□□ -0.21
CAPN3-221ENST00000638141 MRPS27Q92552 414 aaKnown RBP13.74□□□□□ -0.21
CAPN3-221ENST00000638141 BRF1Q92994 677 aa13.74□□□□□ -0.21
CAPN3-221ENST00000638141 H3BQV1 296 aa13.74□□□□□ -0.21
CAPN3-221ENST00000638141 SCP2P22307 547 aa13.74□□□□□ -0.21
CAPN3-221ENST00000638141 IFFO2Q5TF58 517 aa13.74□□□□□ -0.21
CAPN3-221ENST00000638141 BABAM1Q9NWV8 329 aa13.74□□□□□ -0.21
CAPN3-221ENST00000638141 NEDD4P46934 1319 aa13.74□□□□□ -0.21
CAPN3-221ENST00000638141 MCM3P25205 808 aa13.73□□□□□ -0.21
CAPN3-221ENST00000638141 TOB2Q14106 344 aaPredicted RBP13.73□□□□□ -0.21
CAPN3-221ENST00000638141 NBPF10Q6P3W6 841 aaKnown RBP13.73□□□□□ -0.21
CAPN3-221ENST00000638141 CPLX2Q6PUV4 134 aaKnown RBP13.73□□□□□ -0.21
CAPN3-221ENST00000638141 CCDC12Q8WUD4 166 aaPredicted RBP13.73□□□□□ -0.21
CAPN3-221ENST00000638141 BAG1Q99933 345 aaPredicted RBP13.73□□□□□ -0.21
CAPN3-221ENST00000638141 USP44Q9H0E7 712 aa13.73□□□□□ -0.21
CAPN3-221ENST00000638141 HSD3B7Q9H2F3 369 aa13.73□□□□□ -0.21
CAPN3-221ENST00000638141 TOP1P11387 765 aaKnown RBP13.73□□□□□ -0.21
CAPN3-221ENST00000638141 RDXP35241 583 aaKnown RBP13.73□□□□□ -0.21
CAPN3-221ENST00000638141 SMARCC2Q8TAQ2 1214 aa13.73□□□□□ -0.21
CAPN3-221ENST00000638141 CLIC6Q96NY7 704 aa13.73□□□□□ -0.21
CAPN3-221ENST00000638141 JPH2Q9BR39 696 aaPredicted RBP13.73□□□□□ -0.21
CAPN3-221ENST00000638141 ECHDC1Q9NTX5 307 aa13.73□□□□□ -0.21
CAPN3-221ENST00000638141 TSPYL4Q9UJ04 414 aa13.73□□□□□ -0.21
CAPN3-221ENST00000638141 LRRIQ3A6PVS8 624 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-221ENST00000638141 AMPHP49418 695 aa13.72□□□□□ -0.21
CAPN3-221ENST00000638141 UBASH3AP57075 661 aa13.72□□□□□ -0.21
CAPN3-221ENST00000638141 VSNL1P62760 191 aa13.72□□□□□ -0.21
CAPN3-221ENST00000638141 WHAMMP3Q1A5X7 153 aa13.72□□□□□ -0.21
CAPN3-221ENST00000638141 ADALQ6DHV7 355 aa13.72□□□□□ -0.21
CAPN3-221ENST00000638141 ZKSCAN4Q969J2 545 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-221ENST00000638141 PAGR1Q9BTK6 254 aa13.72□□□□□ -0.21
CAPN3-221ENST00000638141 MAP4K4O95819 1239 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-221ENST00000638141 NF2P35240 595 aa13.72□□□□□ -0.21
CAPN3-221ENST00000638141 PIP4K2BP78356 416 aa13.72□□□□□ -0.21
CAPN3-221ENST00000638141 PLCB4Q15147 1175 aa13.72□□□□□ -0.21
CAPN3-221ENST00000638141 ZKSCAN8Q15776 578 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-221ENST00000638141 PPP1R42Q7Z4L9 355 aa13.72□□□□□ -0.21
CAPN3-221ENST00000638141 YTHDF3Q7Z739 585 aaKnown RBP13.72□□□□□ -0.21
CAPN3-221ENST00000638141 SMARCC1Q92922 1105 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-221ENST00000638141 SDF4Q9BRK5 362 aa13.72□□□□□ -0.21
CAPN3-221ENST00000638141 ZC3H4Q9UPT8 1303 aaKnown RBP13.72□□□□□ -0.21
CAPN3-221ENST00000638141 SHTN1A0MZ66 631 aa13.71□□□□□ -0.21
CAPN3-221ENST00000638141 SSR1P43307 286 aaKnown RBP13.71□□□□□ -0.21
CAPN3-221ENST00000638141 B4GALNT4Q76KP1 1039 aa13.71□□□□□ -0.21
CAPN3-221ENST00000638141 MCM10Q7L590 875 aa13.71□□□□□ -0.21
CAPN3-221ENST00000638141 H0YHG0 523 aa13.71□□□□□ -0.22
CAPN3-221ENST00000638141 CCT5P48643 541 aa13.71□□□□□ -0.22
CAPN3-221ENST00000638141 IRAK1P51617 712 aa13.71□□□□□ -0.22
CAPN3-221ENST00000638141 SARNPP82979 210 aaKnown RBP13.71□□□□□ -0.22
CAPN3-221ENST00000638141 PPFIA1Q13136 1202 aa13.71□□□□□ -0.22
CAPN3-221ENST00000638141 WAPLQ7Z5K2 1190 aa13.71□□□□□ -0.22
CAPN3-221ENST00000638141 MAGEC3Q8TD91 643 aa13.71□□□□□ -0.22
CAPN3-221ENST00000638141 PLEKHA4Q9H4M7 779 aa13.71□□□□□ -0.22
CAPN3-221ENST00000638141 ROBO2Q9HCK4 1378 aa13.7□□□□□ -0.22
CAPN3-221ENST00000638141 MED23Q9ULK4 1368 aa13.7□□□□□ -0.22
CAPN3-221ENST00000638141 NWD1Q149M9 1564 aa13.7□□□□□ -0.22
CAPN3-221ENST00000638141 LTBP4Q8N2S1 1624 aa13.7□□□□□ -0.22
CAPN3-221ENST00000638141 NALCNQ8IZF0 1738 aa13.7□□□□□ -0.22
CAPN3-221ENST00000638141 A0A087WWV3 80 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms