RNA–Protein interactions for RNA: ENST00000638041.1

MECP2-225, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-225ENST00000638041 TRIM34Q9BYJ4 488 aa8.73□□□□□ -1.01
MECP2-225ENST00000638041 GPR108Q9NPR9 543 aa8.73□□□□□ -1.01
MECP2-225ENST00000638041 PRDM10Q9NQV6 1147 aa8.73□□□□□ -1.01
MECP2-225ENST00000638041 CSADQ9Y600 493 aa8.73□□□□□ -1.01
MECP2-225ENST00000638041 LTBP1Q14766 1721 aa8.73□□□□□ -1.01
MECP2-225ENST00000638041 PSME4Q14997 1843 aa8.73□□□□□ -1.01
MECP2-225ENST00000638041 SPDYE2BA6NHP3 402 aa8.72□□□□□ -1.01
MECP2-225ENST00000638041 RAB11FIP3O75154 756 aa8.72□□□□□ -1.01
MECP2-225ENST00000638041 SPDYE6P0CI01 402 aa8.72□□□□□ -1.01
MECP2-225ENST00000638041 HIRAP54198 1017 aaPredicted RBP8.72□□□□□ -1.01
MECP2-225ENST00000638041 ATP8B2P98198 1209 aa8.72□□□□□ -1.01
MECP2-225ENST00000638041 FKBP1CQ5VVH2 108 aa8.72□□□□□ -1.01
MECP2-225ENST00000638041 HHIPL2Q6UWX4 724 aa8.72□□□□□ -1.01
MECP2-225ENST00000638041 CLASRPQ8N2M8 674 aaKnown RBP8.72□□□□□ -1.01
MECP2-225ENST00000638041 TMEM57Q8N5G2 664 aa8.72□□□□□ -1.01
MECP2-225ENST00000638041 DEFB129Q9H1M3 183 aa8.72□□□□□ -1.01
MECP2-225ENST00000638041 KCNQ5Q9NR82 932 aa8.72□□□□□ -1.01
MECP2-225ENST00000638041 SAGE1Q9NXZ1 904 aa8.72□□□□□ -1.01
MECP2-225ENST00000638041 LRP2BPQ9P2M1 347 aa8.72□□□□□ -1.01
MECP2-225ENST00000638041 PDS5AQ29RF7 1337 aaKnown RBP8.72□□□□□ -1.01
MECP2-225ENST00000638041 ADAMTSL1Q8N6G6 1762 aa8.71□□□□□ -1.01
MECP2-225ENST00000638041 MANSC4A6NHS7 340 aaPredicted RBP8.71□□□□□ -1.02
MECP2-225ENST00000638041 TRAF5O00463 557 aa8.71□□□□□ -1.02
MECP2-225ENST00000638041 CRKP46108 304 aa8.71□□□□□ -1.02
MECP2-225ENST00000638041 BCAMP50895 628 aa8.71□□□□□ -1.02
MECP2-225ENST00000638041 TTF1Q15361 905 aaPredicted RBP8.71□□□□□ -1.02
MECP2-225ENST00000638041 FAM83AQ86UY5 434 aa8.71□□□□□ -1.02
MECP2-225ENST00000638041 ANKRD13AQ8IZ07 590 aa8.71□□□□□ -1.02
MECP2-225ENST00000638041 DDRGK1Q96HY6 314 aa8.71□□□□□ -1.02
MECP2-225ENST00000638041 ZDHHC15Q96MV8 337 aa8.71□□□□□ -1.02
MECP2-225ENST00000638041 PUS3Q9BZE2 481 aaKnown RBP8.71□□□□□ -1.02
MECP2-225ENST00000638041 ABCF2Q9UG63 623 aa8.71□□□□□ -1.02
MECP2-225ENST00000638041 SALL1Q9NSC2 1324 aa8.71□□□□□ -1.02
MECP2-225ENST00000638041 COL4A5P29400 1685 aa8.7□□□□□ -1.02
MECP2-225ENST00000638041 A0A1B0GUL7 405 aa8.7□□□□□ -1.02
MECP2-225ENST00000638041 ADM5C9JUS6 153 aa8.7□□□□□ -1.02
MECP2-225ENST00000638041 IFIT2P09913 472 aaKnown RBP8.7□□□□□ -1.02
MECP2-225ENST00000638041 ZBTB48P10074 688 aaPredicted RBP8.7□□□□□ -1.02
MECP2-225ENST00000638041 HTRA3P83110 453 aa8.7□□□□□ -1.02
MECP2-225ENST00000638041 NBPF9Q3BBW0 867 aa8.7□□□□□ -1.02
MECP2-225ENST00000638041 CST9Q5W186 159 aa8.7□□□□□ -1.02
MECP2-225ENST00000638041 CYP4F22Q6NT55 531 aa8.7□□□□□ -1.02
MECP2-225ENST00000638041 TXNRD3Q86VQ6 643 aa8.7□□□□□ -1.02
MECP2-225ENST00000638041 AMOTL1Q8IY63 956 aa8.7□□□□□ -1.02
MECP2-225ENST00000638041 TNS4Q8IZW8 715 aa8.7□□□□□ -1.02
MECP2-225ENST00000638041 KIF1BPQ96EK5 621 aa8.7□□□□□ -1.02
MECP2-225ENST00000638041 KAZALD1Q96I82 304 aa8.7□□□□□ -1.02
MECP2-225ENST00000638041 ANGEL1Q9UNK9 670 aaKnown RBP8.7□□□□□ -1.02
MECP2-225ENST00000638041 U3KPZ7 1027 aaPredicted RBP8.7□□□□□ -1.02
MECP2-225ENST00000638041 FGFR2P21802 821 aa8.69□□□□□ -1.02
MECP2-225ENST00000638041 MAP3K12Q12852 859 aa8.69□□□□□ -1.02
MECP2-225ENST00000638041 CCDC102BQ68D86 513 aa8.69□□□□□ -1.02
MECP2-225ENST00000638041 ZSCAN29Q8IWY8 852 aaPredicted RBP8.69□□□□□ -1.02
MECP2-225ENST00000638041 VGLL2Q8N8G2 317 aa8.69□□□□□ -1.02
MECP2-225ENST00000638041 KLHDC4Q8TBB5 520 aa8.69□□□□□ -1.02
MECP2-225ENST00000638041 XAGE2Q96GT9 111 aa8.69□□□□□ -1.02
MECP2-225ENST00000638041 TBC1D2Q9BYX2 928 aa8.69□□□□□ -1.02
MECP2-225ENST00000638041 WBP1LQ9NX94 342 aa8.69□□□□□ -1.02
MECP2-225ENST00000638041 RAI14Q9P0K7 980 aa8.69□□□□□ -1.02
MECP2-225ENST00000638041 PAPPA2Q9BXP8 1791 aa8.68□□□□□ -1.02
MECP2-225ENST00000638041 CLRN2A0PK11 232 aa8.68□□□□□ -1.02
MECP2-225ENST00000638041 ZBTB7BO15156 539 aaPredicted RBP8.68□□□□□ -1.02
MECP2-225ENST00000638041 RFX5P48382 616 aaPredicted RBP8.68□□□□□ -1.02
MECP2-225ENST00000638041 TFCP2Q12800 502 aa8.68□□□□□ -1.02
MECP2-225ENST00000638041 RASA3Q14644 834 aa8.68□□□□□ -1.02
MECP2-225ENST00000638041 PKN2Q16513 984 aaKnown RBP8.68□□□□□ -1.02
MECP2-225ENST00000638041 SPDYE2Q495Y8 402 aa8.68□□□□□ -1.02
MECP2-225ENST00000638041 ZSCAN25Q6NSZ9 544 aa8.68□□□□□ -1.02
MECP2-225ENST00000638041 ATG9AQ7Z3C6 839 aa8.68□□□□□ -1.02
MECP2-225ENST00000638041 SPATA5Q8NB90 893 aa8.68□□□□□ -1.02
MECP2-225ENST00000638041 SSH3Q8TE77 659 aa8.68□□□□□ -1.02
MECP2-225ENST00000638041 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.68□□□□□ -1.02
MECP2-225ENST00000638041 ZNF70Q9UC06 446 aaPredicted RBP8.68□□□□□ -1.02
MECP2-225ENST00000638041 IQSEC3Q9UPP2 1182 aaPredicted RBP8.68□□□□□ -1.02
MECP2-225ENST00000638041 TCP10L2B9ZVM9 353 aa8.67□□□□□ -1.02
MECP2-225ENST00000638041 HLA-DOAP06340 250 aa8.67□□□□□ -1.02
MECP2-225ENST00000638041 SLC10A3P09131 477 aa8.67□□□□□ -1.02
MECP2-225ENST00000638041 KLRK1P26718 216 aa8.67□□□□□ -1.02
MECP2-225ENST00000638041 GTF2A2P52657 109 aa8.67□□□□□ -1.02
MECP2-225ENST00000638041 TIMM10P62072 90 aa8.67□□□□□ -1.02
MECP2-225ENST00000638041 MAP3K9P80192 1104 aa8.67□□□□□ -1.02
MECP2-225ENST00000638041 KIF22Q14807 665 aa8.67□□□□□ -1.02
MECP2-225ENST00000638041 NAA16Q6N069 864 aaPredicted RBP8.67□□□□□ -1.02
MECP2-225ENST00000638041 FAM151AQ8WW52 585 aa8.67□□□□□ -1.02
MECP2-225ENST00000638041 ZNF512BQ96KM6 892 aaPredicted RBP8.67□□□□□ -1.02
MECP2-225ENST00000638041 PRMT6Q96LA8 375 aaPredicted RBP8.67□□□□□ -1.02
MECP2-225ENST00000638041 ZNF341Q9BYN7 854 aa8.67□□□□□ -1.02
MECP2-225ENST00000638041 TDRD3Q9H7E2 651 aaKnown RBP8.67□□□□□ -1.02
MECP2-225ENST00000638041 PICK1Q9NRD5 415 aa8.67□□□□□ -1.02
MECP2-225ENST00000638041 USP40Q9NVE5 1235 aa8.67□□□□□ -1.02
MECP2-225ENST00000638041 MYH13Q9UKX3 1938 aa8.67□□□□□ -1.02
MECP2-225ENST00000638041 PA2G4Q9UQ80 394 aaKnown RBP8.67□□□□□ -1.02
MECP2-225ENST00000638041 JAG2Q9Y219 1238 aa8.67□□□□□ -1.02
MECP2-225ENST00000638041 NOP58Q9Y2X3 529 aaKnown RBP8.67□□□□□ -1.02
MECP2-225ENST00000638041 SHTN1A0MZ66 631 aa8.66□□□□□ -1.02
MECP2-225ENST00000638041 SNAP23O00161 211 aa8.66□□□□□ -1.02
MECP2-225ENST00000638041 ENTPD3O75355 529 aa8.66□□□□□ -1.02
MECP2-225ENST00000638041 PRKG1Q13976 671 aa8.66□□□□□ -1.02
MECP2-225ENST00000638041 POLA2Q14181 598 aa8.66□□□□□ -1.02
MECP2-225ENST00000638041 MAP3K11Q16584 847 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms