RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 DZIP1LQ8IYY4 767 aaKnown RBP22.06■■□□□ 1.12
PNKP-230ENST00000638016 CCDC102AQ96A19 550 aa22.06■■□□□ 1.12
PNKP-230ENST00000638016 C1orf115Q9H7X2 142 aa22.06■■□□□ 1.12
PNKP-230ENST00000638016 ZNF70Q9UC06 446 aaPredicted RBP22.06■■□□□ 1.12
PNKP-230ENST00000638016 SERPINA10Q9UK55 444 aa22.06■■□□□ 1.12
PNKP-230ENST00000638016 FBXO3Q9UK99 471 aa22.06■■□□□ 1.12
PNKP-230ENST00000638016 MYO1BO43795 1136 aa22.05■■□□□ 1.12
PNKP-230ENST00000638016 GNAI2P04899 355 aa22.05■■□□□ 1.12
PNKP-230ENST00000638016 NF2P35240 595 aa22.05■■□□□ 1.12
PNKP-230ENST00000638016 PHKA1P46020 1223 aa22.05■■□□□ 1.12
PNKP-230ENST00000638016 MKRN3Q13064 507 aaKnown RBP22.05■■□□□ 1.12
PNKP-230ENST00000638016 SPDYE2Q495Y8 402 aa22.05■■□□□ 1.12
PNKP-230ENST00000638016 NBPF12Q5TAG4 269 aaPredicted RBP22.05■■□□□ 1.12
PNKP-230ENST00000638016 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.05■■□□□ 1.12
PNKP-230ENST00000638016 HDAC5Q9UQL6 1122 aa22.05■■□□□ 1.12
PNKP-230ENST00000638016 RASA3Q14644 834 aa22.04■■□□□ 1.12
PNKP-230ENST00000638016 ANGEL1Q9UNK9 670 aaKnown RBP22.04■■□□□ 1.12
PNKP-230ENST00000638016 CACNB3P54284 484 aa22.03■■□□□ 1.12
PNKP-230ENST00000638016 TIMM10P62072 90 aa22.03■■□□□ 1.12
PNKP-230ENST00000638016 TFCP2Q12800 502 aa22.03■■□□□ 1.12
PNKP-230ENST00000638016 TBC1D22AQ8WUA7 517 aa22.03■■□□□ 1.12
PNKP-230ENST00000638016 CSRNP1Q96S65 589 aa22.03■■□□□ 1.12
PNKP-230ENST00000638016 AKAP11Q9UKA4 1901 aa22.02■■□□□ 1.12
PNKP-230ENST00000638016 TCP10L2B9ZVM9 353 aa22.02■■□□□ 1.12
PNKP-230ENST00000638016 ARMC9Q7Z3E5 817 aa22.01■■□□□ 1.11
PNKP-230ENST00000638016 ITPRIPQ8IWB1 547 aa22.01■■□□□ 1.11
PNKP-230ENST00000638016 FTSJ3Q8IY81 847 aaKnown RBP22.01■■□□□ 1.11
PNKP-230ENST00000638016 CLMNQ96JQ2 1002 aa22.01■■□□□ 1.11
PNKP-230ENST00000638016 OTOFQ9HC10 1997 aa22.01■■□□□ 1.11
PNKP-230ENST00000638016 A0A1B0GUL7 405 aa22■■□□□ 1.11
PNKP-230ENST00000638016 PRDX5P30044 214 aa22■■□□□ 1.11
PNKP-230ENST00000638016 CCDC102BQ68D86 513 aa22■■□□□ 1.11
PNKP-230ENST00000638016 TEKT1Q969V4 418 aa22■■□□□ 1.11
PNKP-230ENST00000638016 TMEM39BQ9GZU3 492 aa22■■□□□ 1.11
PNKP-230ENST00000638016 PPP2R3BQ9Y5P8 575 aa22■■□□□ 1.11
PNKP-230ENST00000638016 TRPA1O75762 1119 aa21.99■■□□□ 1.11
PNKP-230ENST00000638016 DIXDC1Q155Q3 683 aa21.99■■□□□ 1.11
PNKP-230ENST00000638016 LDLRAD1Q5T700 205 aa21.99■■□□□ 1.11
PNKP-230ENST00000638016 APOBEC3HQ6NTF7 200 aaKnown RBP21.99■■□□□ 1.11
PNKP-230ENST00000638016 PANK1Q8TE04 598 aa21.99■■□□□ 1.11
PNKP-230ENST00000638016 TEPSINQ96N21 525 aa21.99■■□□□ 1.11
PNKP-230ENST00000638016 RNF186Q9NXI6 227 aa21.99■■□□□ 1.11
PNKP-230ENST00000638016 CA12O43570 354 aa21.98■■□□□ 1.11
PNKP-230ENST00000638016 WDR66Q8TBY9 1149 aa21.98■■□□□ 1.11
PNKP-230ENST00000638016 XAGE2Q96GT9 111 aa21.98■■□□□ 1.11
PNKP-230ENST00000638016 HDLBPQ00341 1268 aaKnown RBP21.97■■□□□ 1.11
PNKP-230ENST00000638016 RASGRF1Q13972 1273 aa21.97■■□□□ 1.11
PNKP-230ENST00000638016 ZDHHC15Q96MV8 337 aa21.97■■□□□ 1.11
PNKP-230ENST00000638016 ZBTB7BO15156 539 aaPredicted RBP21.96■■□□□ 1.11
PNKP-230ENST00000638016 USP2O75604 605 aaPredicted RBP21.96■■□□□ 1.11
PNKP-230ENST00000638016 POLA2Q14181 598 aa21.96■■□□□ 1.11
PNKP-230ENST00000638016 MAP3K11Q16584 847 aa21.96■■□□□ 1.11
PNKP-230ENST00000638016 DAGLAQ9Y4D2 1042 aa21.96■■□□□ 1.11
PNKP-230ENST00000638016 TNFAIP1Q13829 316 aa21.95■■□□□ 1.1
PNKP-230ENST00000638016 SUPT20HL1Q3ZLR7 823 aa21.95■■□□□ 1.1
PNKP-230ENST00000638016 NEUROD6Q96NK8 337 aa21.95■■□□□ 1.1
PNKP-230ENST00000638016 GNL3LQ9NVN8 582 aaKnown RBP21.95■■□□□ 1.1
PNKP-230ENST00000638016 SUGT1Q9Y2Z0 365 aa21.95■■□□□ 1.1
PNKP-230ENST00000638016 MAST3O60307 1309 aa21.95■■□□□ 1.1
PNKP-230ENST00000638016 PPP1R12BO60237 982 aaPredicted RBP21.94■■□□□ 1.1
PNKP-230ENST00000638016 SPRYD7Q5W111 196 aa21.94■■□□□ 1.1
PNKP-230ENST00000638016 PI16Q6UXB8 463 aa21.94■■□□□ 1.1
PNKP-230ENST00000638016 DENND2AQ9ULE3 1009 aa21.94■■□□□ 1.1
PNKP-230ENST00000638016 MYH2Q9UKX2 1941 aa21.94■■□□□ 1.1
PNKP-230ENST00000638016 GJA5P36382 358 aa21.93■■□□□ 1.1
PNKP-230ENST00000638016 ATP8B2P98198 1209 aa21.93■■□□□ 1.1
PNKP-230ENST00000638016 G3BP1Q13283 466 aaKnown RBP eCLIP21.93■■□□□ 1.1
PNKP-230ENST00000638016 HHIPL2Q6UWX4 724 aa21.93■■□□□ 1.1
PNKP-230ENST00000638016 SSH3Q8TE77 659 aa21.93■■□□□ 1.1
PNKP-230ENST00000638016 SAGE1Q9NXZ1 904 aa21.93■■□□□ 1.1
PNKP-230ENST00000638016 SALL1Q9NSC2 1324 aa21.92■■□□□ 1.1
PNKP-230ENST00000638016 SEMA3EO15041 775 aa21.92■■□□□ 1.1
PNKP-230ENST00000638016 LDHBP07195 334 aaKnown RBP21.92■■□□□ 1.1
PNKP-230ENST00000638016 MRIQ9BWK5 157 aa21.92■■□□□ 1.1
PNKP-230ENST00000638016 AKAP2Q9Y2D5 859 aa21.92■■□□□ 1.1
PNKP-230ENST00000638016 TNNI2P48788 182 aa21.91■■□□□ 1.1
PNKP-230ENST00000638016 NFIAQ12857 509 aa21.91■■□□□ 1.1
PNKP-230ENST00000638016 CDC42EP5Q6NZY7 148 aa21.91■■□□□ 1.1
PNKP-230ENST00000638016 CNKSR2Q8WXI2 1034 aa21.91■■□□□ 1.1
PNKP-230ENST00000638016 SLC10A4Q96EP9 437 aa21.91■■□□□ 1.1
PNKP-230ENST00000638016 WNK4Q96J92 1243 aa21.91■■□□□ 1.1
PNKP-230ENST00000638016 ABCF2Q9UG63 623 aa21.91■■□□□ 1.1
PNKP-230ENST00000638016 TBC1D8O95759 1140 aa21.9■■□□□ 1.1
PNKP-230ENST00000638016 IREB2P48200 963 aaKnown RBP21.9■■□□□ 1.1
PNKP-230ENST00000638016 MVPQ14764 893 aaKnown RBP21.9■■□□□ 1.1
PNKP-230ENST00000638016 ELP3Q9H9T3 547 aa21.9■■□□□ 1.1
PNKP-230ENST00000638016 TMOD2Q9NZR1 351 aa21.9■■□□□ 1.1
PNKP-230ENST00000638016 HMG20BQ9P0W2 317 aa21.9■■□□□ 1.1
PNKP-230ENST00000638016 SURF6O75683 361 aaKnown RBP21.89■■□□□ 1.09
PNKP-230ENST00000638016 CEP85Q6P2H3 762 aa21.89■■□□□ 1.09
PNKP-230ENST00000638016 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.89■■□□□ 1.09
PNKP-230ENST00000638016 ABHD8Q96I13 439 aa21.89■■□□□ 1.09
PNKP-230ENST00000638016 R3HDMLQ9H3Y0 253 aa21.89■■□□□ 1.09
PNKP-230ENST00000638016 LAMB1P07942 1786 aa21.89■■□□□ 1.09
PNKP-230ENST00000638016 TM4SF4P48230 202 aa21.88■■□□□ 1.09
PNKP-230ENST00000638016 TCP10Q12799 353 aa21.88■■□□□ 1.09
PNKP-230ENST00000638016 OS9Q13438 667 aaPredicted RBP21.88■■□□□ 1.09
PNKP-230ENST00000638016 TBC1D9Q6ZT07 1266 aa21.88■■□□□ 1.09
PNKP-230ENST00000638016 ANKRD13AQ8IZ07 590 aa21.88■■□□□ 1.09
PNKP-230ENST00000638016 ZNF384Q8TF68 577 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms