RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 PLPP6Q8IY26 295 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 MPNDQ8N594 471 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 CDK5RAP3Q96JB5 506 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 UPF3BQ9BZI7 483 aaKnown RBP6.43□□□□□ -1.38
CHD2-227ENST00000637572 OSBPL3Q9H4L5 887 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 STAP2Q9UGK3 403 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 SERPINA10Q9UK55 444 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 CLSTN1O94985 981 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 CYP19A1P11511 503 aaPredicted RBP6.43□□□□□ -1.38
CHD2-227ENST00000637572 SSRP1Q08945 709 aaKnown RBP6.43□□□□□ -1.38
CHD2-227ENST00000637572 PROSER3Q2NL68 480 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 DBNDD2Q9BQY9 259 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 RTL9Q8NET4 1388 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.43□□□□□ -1.38
CHD2-227ENST00000637572 TIMM10P62072 90 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 HIC1Q14526 733 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 WTAPQ15007 396 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 OLFM4Q6UX06 510 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 TRPC6Q9Y210 931 aa6.43□□□□□ -1.38
CHD2-227ENST00000637572 PDE8BO95263 885 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 PPP2R5BQ15173 497 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 MAGEB6Q8N7X4 407 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 HELBQ8NG08 1087 aaPredicted RBP6.42□□□□□ -1.38
CHD2-227ENST00000637572 C8orf76Q96K31 380 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 ADAMTSL3P82987 1691 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 XDHP47989 1333 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 BMP15O95972 392 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 SERPINB2P05120 415 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 NF2P35240 595 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 IARSP41252 1262 aaKnown RBP6.42□□□□□ -1.38
CHD2-227ENST00000637572 FOXD4L6Q3SYB3 417 aaPredicted RBP6.42□□□□□ -1.38
CHD2-227ENST00000637572 TSHZ3Q63HK5 1081 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 FOXD4L3Q6VB84 417 aaPredicted RBP6.42□□□□□ -1.38
CHD2-227ENST00000637572 SPATA5Q8NB90 893 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 PYM1Q9BRP8 204 aaKnown RBP6.42□□□□□ -1.38
CHD2-227ENST00000637572 RAB34Q9BZG1 259 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 DACH1Q9UI36 760 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 KIF20BQ96Q89 1820 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 TSPY3P0CV98 308 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 TSPY8P0CW00 308 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 METAP2P50579 478 aaKnown RBP eCLIP6.42□□□□□ -1.38
CHD2-227ENST00000637572 PDIA6Q15084 440 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 CUL5Q93034 780 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 SH2D4AQ9H788 454 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 IQSEC2Q5JU85 1478 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 COL15A1P39059 1388 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 EIF6P56537 245 aaKnown RBP6.42□□□□□ -1.38
CHD2-227ENST00000637572 DHX32Q7L7V1 743 aaKnown RBP6.42□□□□□ -1.38
CHD2-227ENST00000637572 CCDC83Q8IWF9 413 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 ZSCAN16Q9H4T2 348 aaPredicted RBP6.42□□□□□ -1.38
CHD2-227ENST00000637572 PXDNLA1KZ92 1463 aa6.42□□□□□ -1.38
CHD2-227ENST00000637572 SGSM2O43147 1006 aa6.41□□□□□ -1.38
CHD2-227ENST00000637572 ZBTB43O43298 467 aa6.41□□□□□ -1.38
CHD2-227ENST00000637572 PCP11498 1178 aaKnown RBP6.41□□□□□ -1.38
CHD2-227ENST00000637572 LMOD1P29536 600 aaPredicted RBP6.41□□□□□ -1.38
CHD2-227ENST00000637572 TNIP1Q15025 636 aa6.41□□□□□ -1.38
CHD2-227ENST00000637572 NFKBIBQ15653 356 aa6.41□□□□□ -1.38
CHD2-227ENST00000637572 C8orf34Q49A92 452 aa6.41□□□□□ -1.38
CHD2-227ENST00000637572 CCDC148Q8NFR7 591 aa6.41□□□□□ -1.38
CHD2-227ENST00000637572 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.41□□□□□ -1.38
CHD2-227ENST00000637572 INTS4Q96HW7 963 aaKnown RBP6.41□□□□□ -1.38
CHD2-227ENST00000637572 TMEM87BQ96K49 555 aa6.41□□□□□ -1.38
CHD2-227ENST00000637572 DSCC1Q9BVC3 393 aa6.41□□□□□ -1.38
CHD2-227ENST00000637572 BMP2KQ9NSY1 1161 aaPredicted RBP6.41□□□□□ -1.38
CHD2-227ENST00000637572 RGS12O14924 1447 aa6.41□□□□□ -1.38
CHD2-227ENST00000637572 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.41□□□□□ -1.38
CHD2-227ENST00000637572 SPATA32Q96LK8 384 aa6.41□□□□□ -1.38
CHD2-227ENST00000637572 HAUS7Q99871 368 aa6.41□□□□□ -1.38
CHD2-227ENST00000637572 ISCA1Q9BUE6 129 aa6.41□□□□□ -1.38
CHD2-227ENST00000637572 CARMIL3Q8ND23 1372 aa6.41□□□□□ -1.38
CHD2-227ENST00000637572 ME1P48163 572 aa6.41□□□□□ -1.38
CHD2-227ENST00000637572 CCDC96Q2M329 555 aa6.41□□□□□ -1.38
CHD2-227ENST00000637572 IFIT1BQ5T764 474 aaKnown RBP6.41□□□□□ -1.38
CHD2-227ENST00000637572 CREB3L3Q68CJ9 461 aa6.41□□□□□ -1.38
CHD2-227ENST00000637572 C2CD5Q86YS7 1000 aa6.41□□□□□ -1.38
CHD2-227ENST00000637572 ZNF594Q96JF6 807 aaPredicted RBP6.41□□□□□ -1.38
CHD2-227ENST00000637572 GPHNQ9NQX3 736 aaPredicted RBP6.41□□□□□ -1.38
CHD2-227ENST00000637572 NPR1P16066 1061 aa6.4□□□□□ -1.38
CHD2-227ENST00000637572 NIM1KQ8IY84 436 aa6.4□□□□□ -1.38
CHD2-227ENST00000637572 LARGE2Q8N3Y3 721 aa6.4□□□□□ -1.38
CHD2-227ENST00000637572 FEZ1Q99689 392 aa6.4□□□□□ -1.38
CHD2-227ENST00000637572 USP26Q9BXU7 913 aa6.4□□□□□ -1.38
CHD2-227ENST00000637572 TM6SF1Q9BZW5 370 aa6.4□□□□□ -1.38
CHD2-227ENST00000637572 MCM9Q9NXL9 1143 aa6.4□□□□□ -1.38
CHD2-227ENST00000637572 CNTNAP4Q9C0A0 1308 aa6.4□□□□□ -1.38
CHD2-227ENST00000637572 FIBPO43427 364 aa6.4□□□□□ -1.38
CHD2-227ENST00000637572 FOSBP53539 338 aa6.4□□□□□ -1.38
CHD2-227ENST00000637572 STIM1Q13586 685 aa6.4□□□□□ -1.38
CHD2-227ENST00000637572 UBE3CQ15386 1083 aa6.4□□□□□ -1.38
CHD2-227ENST00000637572 STK11IPQ8N1F8 1099 aa6.4□□□□□ -1.38
CHD2-227ENST00000637572 MPHOSPH6Q99547 160 aaKnown RBP6.4□□□□□ -1.38
CHD2-227ENST00000637572 TBC1D2Q9BYX2 928 aa6.4□□□□□ -1.38
CHD2-227ENST00000637572 RBM28Q9NW13 759 aaKnown RBP6.4□□□□□ -1.38
CHD2-227ENST00000637572 COL3A1P02461 1466 aaPredicted RBP6.4□□□□□ -1.38
CHD2-227ENST00000637572 CHRNDQ07001 517 aa6.4□□□□□ -1.39
CHD2-227ENST00000637572 IRF5Q13568 498 aa6.4□□□□□ -1.39
CHD2-227ENST00000637572 MFSD10Q14728 455 aa6.4□□□□□ -1.39
CHD2-227ENST00000637572 TEX11Q8IYF3 940 aa6.4□□□□□ -1.39
CHD2-227ENST00000637572 KIF12Q96FN5 646 aa6.4□□□□□ -1.39
CHD2-227ENST00000637572 PLA2G12BQ9BX93 195 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms