RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 ZNF512BQ96KM6 892 aaPredicted RBP21.03■□□□□ 0.96
CLN6-218ENST00000637223 PDS5AQ29RF7 1337 aaKnown RBP21.03■□□□□ 0.96
CLN6-218ENST00000637223 ITGBL1O95965 494 aaPredicted RBP21.02■□□□□ 0.96
CLN6-218ENST00000637223 OTUD7AQ8TE49 926 aaPredicted RBP21.02■□□□□ 0.96
CLN6-218ENST00000637223 HDAC9Q9UKV0 1011 aa21.02■□□□□ 0.96
CLN6-218ENST00000637223 TTF2Q9UNY4 1162 aaKnown RBP21.02■□□□□ 0.96
CLN6-218ENST00000637223 HSPA8P11142 646 aaKnown RBP21.01■□□□□ 0.95
CLN6-218ENST00000637223 PRDX5P30044 214 aa21.01■□□□□ 0.95
CLN6-218ENST00000637223 ZAP70P43403 619 aa21.01■□□□□ 0.95
CLN6-218ENST00000637223 KIF4BQ2VIQ3 1234 aa21.01■□□□□ 0.95
CLN6-218ENST00000637223 TBC1D9Q6ZT07 1266 aa21.01■□□□□ 0.95
CLN6-218ENST00000637223 USP50Q70EL3 339 aaPredicted RBP21.01■□□□□ 0.95
CLN6-218ENST00000637223 PNMA8AQ86V59 439 aaPredicted RBP21.01■□□□□ 0.95
CLN6-218ENST00000637223 LNPKQ9C0E8 428 aa21.01■□□□□ 0.95
CLN6-218ENST00000637223 MYOZ2Q9NPC6 264 aa21.01■□□□□ 0.95
CLN6-218ENST00000637223 ABCF2Q9UG63 623 aa21.01■□□□□ 0.95
CLN6-218ENST00000637223 NDUFB9Q9Y6M9 179 aa21.01■□□□□ 0.95
CLN6-218ENST00000637223 SALL1Q9NSC2 1324 aa21.01■□□□□ 0.95
CLN6-218ENST00000637223 HIRAP54198 1017 aaPredicted RBP21■□□□□ 0.95
CLN6-218ENST00000637223 TSHZ3Q63HK5 1081 aa21■□□□□ 0.95
CLN6-218ENST00000637223 CLEC11AQ9Y240 323 aa21■□□□□ 0.95
CLN6-218ENST00000637223 SCN4AP35499 1836 aa20.99■□□□□ 0.95
CLN6-218ENST00000637223 LDHBP07195 334 aaKnown RBP20.99■□□□□ 0.95
CLN6-218ENST00000637223 NUCB1Q02818 461 aa20.99■□□□□ 0.95
CLN6-218ENST00000637223 DEFB115Q30KQ5 88 aa20.99■□□□□ 0.95
CLN6-218ENST00000637223 CHD1LQ86WJ1 897 aa20.99■□□□□ 0.95
CLN6-218ENST00000637223 ZGPATQ8N5A5 531 aaKnown RBP20.99■□□□□ 0.95
CLN6-218ENST00000637223 ECHDC1Q9NTX5 307 aa20.99■□□□□ 0.95
CLN6-218ENST00000637223 SUGT1Q9Y2Z0 365 aa20.99■□□□□ 0.95
CLN6-218ENST00000637223 CYP2E1P05181 493 aaPredicted RBP20.98■□□□□ 0.95
CLN6-218ENST00000637223 MLLT1Q03111 559 aaPredicted RBP20.98■□□□□ 0.95
CLN6-218ENST00000637223 CFAP100Q494V2 611 aa20.98■□□□□ 0.95
CLN6-218ENST00000637223 GPATCH3Q96I76 525 aa20.98■□□□□ 0.95
CLN6-218ENST00000637223 DNAJC2Q99543 621 aaKnown RBP20.98■□□□□ 0.95
CLN6-218ENST00000637223 BOLA2Q9H3K6 86 aa20.98■□□□□ 0.95
CLN6-218ENST00000637223 PCDH10Q9P2E7 1040 aa20.98■□□□□ 0.95
CLN6-218ENST00000637223 PCDHAC2Q9Y5I4 1007 aa20.98■□□□□ 0.95
CLN6-218ENST00000637223 CCDC85CA6NKD9 419 aa20.97■□□□□ 0.95
CLN6-218ENST00000637223 ATP5JP18859 108 aa20.97■□□□□ 0.95
CLN6-218ENST00000637223 RBM5P52756 815 aaKnown RBP eCLIP20.97■□□□□ 0.95
CLN6-218ENST00000637223 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.97■□□□□ 0.95
CLN6-218ENST00000637223 PIH1D3Q9NQM4 214 aaKnown RBP20.97■□□□□ 0.95
CLN6-218ENST00000637223 RASSF10A6NK89 507 aa20.96■□□□□ 0.95
CLN6-218ENST00000637223 CRKP46108 304 aa20.96■□□□□ 0.95
CLN6-218ENST00000637223 MMP14P50281 582 aa20.96■□□□□ 0.95
CLN6-218ENST00000637223 MAP2K1Q02750 393 aaPredicted RBP20.96■□□□□ 0.95
CLN6-218ENST00000637223 DLGAP5Q15398 846 aa20.96■□□□□ 0.95
CLN6-218ENST00000637223 NBPF9Q3BBW0 867 aa20.96■□□□□ 0.95
CLN6-218ENST00000637223 SPTY2D1Q68D10 685 aaPredicted RBP20.96■□□□□ 0.95
CLN6-218ENST00000637223 ERICH6Q7L0X2 663 aa20.96■□□□□ 0.95
CLN6-218ENST00000637223 ANTXR1Q9H6X2 564 aa20.96■□□□□ 0.95
CLN6-218ENST00000637223 LRP2BPQ9P2M1 347 aa20.96■□□□□ 0.95
CLN6-218ENST00000637223 MAST3O60307 1309 aa20.96■□□□□ 0.95
CLN6-218ENST00000637223 ASTN2O75129 1339 aaPredicted RBP20.96■□□□□ 0.95
CLN6-218ENST00000637223 MX1P20591 662 aa20.95■□□□□ 0.94
CLN6-218ENST00000637223 DIXDC1Q155Q3 683 aa20.95■□□□□ 0.94
CLN6-218ENST00000637223 DZIP1Q86YF9 867 aaKnown RBP20.95■□□□□ 0.94
CLN6-218ENST00000637223 TEKT1Q969V4 418 aa20.95■□□□□ 0.94
CLN6-218ENST00000637223 CCDC136Q96JN2 1154 aa20.95■□□□□ 0.94
CLN6-218ENST00000637223 RAI14Q9P0K7 980 aa20.95■□□□□ 0.94
CLN6-218ENST00000637223 SERPINA10Q9UK55 444 aa20.95■□□□□ 0.94
CLN6-218ENST00000637223 SALL3Q9BXA9 1300 aa20.95■□□□□ 0.94
CLN6-218ENST00000637223 WDR33Q9C0J8 1336 aaKnown RBP20.95■□□□□ 0.94
CLN6-218ENST00000637223 MYH13Q9UKX3 1938 aa20.94■□□□□ 0.94
CLN6-218ENST00000637223 GOLIM4O00461 696 aa20.94■□□□□ 0.94
CLN6-218ENST00000637223 WNT10BO00744 389 aa20.94■□□□□ 0.94
CLN6-218ENST00000637223 EDC3Q96F86 508 aaKnown RBP20.94■□□□□ 0.94
CLN6-218ENST00000637223 ZBED3Q96IU2 234 aaPredicted RBP20.94■□□□□ 0.94
CLN6-218ENST00000637223 HAUS7Q99871 368 aa20.94■□□□□ 0.94
CLN6-218ENST00000637223 SPDYE2BA6NHP3 402 aa20.93■□□□□ 0.94
CLN6-218ENST00000637223 SPDYE6P0CI01 402 aa20.93■□□□□ 0.94
CLN6-218ENST00000637223 HDLBPQ00341 1268 aaKnown RBP20.93■□□□□ 0.94
CLN6-218ENST00000637223 MECOMQ03112 1051 aa20.93■□□□□ 0.94
CLN6-218ENST00000637223 MAP1SQ66K74 1059 aaPredicted RBP20.93■□□□□ 0.94
CLN6-218ENST00000637223 CNTROBQ8N137 903 aa20.93■□□□□ 0.94
CLN6-218ENST00000637223 MTMR14Q8NCE2 650 aa20.93■□□□□ 0.94
CLN6-218ENST00000637223 PRMT6Q96LA8 375 aaPredicted RBP20.93■□□□□ 0.94
CLN6-218ENST00000637223 GGA3Q9NZ52 723 aa20.93■□□□□ 0.94
CLN6-218ENST00000637223 ABT1Q9ULW3 272 aaKnown RBP20.93■□□□□ 0.94
CLN6-218ENST00000637223 TTC41PQ6P2S7 1318 aa20.93■□□□□ 0.94
CLN6-218ENST00000637223 IDH1O75874 414 aaKnown RBP20.92■□□□□ 0.94
CLN6-218ENST00000637223 ANGEL2Q5VTE6 544 aaKnown RBP20.92■□□□□ 0.94
CLN6-218ENST00000637223 CENPQQ7L2Z9 268 aaPredicted RBP20.92■□□□□ 0.94
CLN6-218ENST00000637223 PI4K2BQ8TCG2 481 aa20.92■□□□□ 0.94
CLN6-218ENST00000637223 PAG1Q9NWQ8 432 aa20.92■□□□□ 0.94
CLN6-218ENST00000637223 AOX1Q06278 1338 aa20.92■□□□□ 0.94
CLN6-218ENST00000637223 ERC2O15083 957 aa20.91■□□□□ 0.94
CLN6-218ENST00000637223 RGS19P49795 217 aa20.91■□□□□ 0.94
CLN6-218ENST00000637223 PDE1AP54750 535 aa20.91■□□□□ 0.94
CLN6-218ENST00000637223 ERICH6BQ5W0A0 696 aa20.91■□□□□ 0.94
CLN6-218ENST00000637223 HHIPL2Q6UWX4 724 aa20.91■□□□□ 0.94
CLN6-218ENST00000637223 ADAMTSL1Q8N6G6 1762 aa20.91■□□□□ 0.94
CLN6-218ENST00000637223 ZNF384Q8TF68 577 aa20.91■□□□□ 0.94
CLN6-218ENST00000637223 ZC3H15Q8WU90 426 aaKnown RBP20.91■□□□□ 0.94
CLN6-218ENST00000637223 NSUN4Q96CB9 384 aaKnown RBP20.91■□□□□ 0.94
CLN6-218ENST00000637223 MRIQ9BWK5 157 aa20.91■□□□□ 0.94
CLN6-218ENST00000637223 PGAP2Q9UHJ9 254 aa20.91■□□□□ 0.94
CLN6-218ENST00000637223 DAGLAQ9Y4D2 1042 aa20.91■□□□□ 0.94
CLN6-218ENST00000637223 CLRN2A0PK11 232 aa20.9■□□□□ 0.94
CLN6-218ENST00000637223 GLRX3O76003 335 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms