RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 NLRP13Q86W25 1043 aa3.99□□□□□ -1.77
VIM-210ENST00000637053 FTSJ3Q8IY81 847 aaKnown RBP3.99□□□□□ -1.77
VIM-210ENST00000637053 AGBL5Q8NDL9 886 aa3.99□□□□□ -1.77
VIM-210ENST00000637053 OR13H1Q8NG92 308 aa3.99□□□□□ -1.77
VIM-210ENST00000637053 GIMAP7Q8NHV1 300 aa3.99□□□□□ -1.77
VIM-210ENST00000637053 GATA6Q92908 595 aa3.99□□□□□ -1.77
VIM-210ENST00000637053 EVI5LQ96CN4 794 aa3.99□□□□□ -1.77
VIM-210ENST00000637053 POP1Q99575 1024 aaKnown RBP3.99□□□□□ -1.77
VIM-210ENST00000637053 KLHL42Q9P2K6 505 aa3.99□□□□□ -1.77
VIM-210ENST00000637053 MAGEC2Q9UBF1 373 aaPredicted RBP3.99□□□□□ -1.77
VIM-210ENST00000637053 RBM19Q9Y4C8 960 aaKnown RBP3.99□□□□□ -1.77
VIM-210ENST00000637053 NCANO14594 1321 aa3.98□□□□□ -1.77
VIM-210ENST00000637053 FAM170BA6NMN3 283 aa3.98□□□□□ -1.77
VIM-210ENST00000637053 PRRG2O14669 202 aa3.98□□□□□ -1.77
VIM-210ENST00000637053 GAS2O43903 313 aaKnown RBP3.98□□□□□ -1.77
VIM-210ENST00000637053 SMNDC1O75940 238 aaKnown RBP eCLIP3.98□□□□□ -1.77
VIM-210ENST00000637053 RXRBP28702 533 aa3.98□□□□□ -1.77
VIM-210ENST00000637053 FOXD4Q12950 439 aaPredicted RBP3.98□□□□□ -1.77
VIM-210ENST00000637053 SF3A1Q15459 793 aaKnown RBP3.98□□□□□ -1.77
VIM-210ENST00000637053 FAM26DQ5JW98 314 aa3.98□□□□□ -1.77
VIM-210ENST00000637053 FAM117BQ6P1L5 589 aa3.98□□□□□ -1.77
VIM-210ENST00000637053 FDX2Q6P4F2 183 aa3.98□□□□□ -1.77
VIM-210ENST00000637053 LILRA6Q6PI73 481 aa3.98□□□□□ -1.77
VIM-210ENST00000637053 ZNF574Q6ZN55 896 aaPredicted RBP3.98□□□□□ -1.77
VIM-210ENST00000637053 SMC5Q8IY18 1101 aa3.98□□□□□ -1.77
VIM-210ENST00000637053 RUSC1Q9BVN2 902 aa3.98□□□□□ -1.77
VIM-210ENST00000637053 METTL14Q9HCE5 456 aaKnown RBP3.98□□□□□ -1.77
VIM-210ENST00000637053 ZC3H7BQ9UGR2 993 aaKnown RBP3.98□□□□□ -1.77
VIM-210ENST00000637053 FAM95CA0A1B0GW59 222 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 CARNS1A5YM72 827 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 MEGF11A6BM72 1044 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 CREB3O43889 395 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 TIAF1O95411 115 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 ZNF16P17020 682 aaPredicted RBP3.97□□□□□ -1.77
VIM-210ENST00000637053 DEKP35659 375 aaKnown RBP3.97□□□□□ -1.77
VIM-210ENST00000637053 BUD31P41223 144 aaPredicted RBP3.97□□□□□ -1.77
VIM-210ENST00000637053 FAM193AP78312 1265 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 MESP2Q0VG99 397 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 DPYDQ12882 1025 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 ZNF792Q3KQV3 632 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 CDPF1Q6NVV7 123 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 SPRED2Q7Z698 418 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 ZAR1Q86SH2 424 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 FBLIM1Q8WUP2 373 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 GPATCH3Q96I76 525 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 MTA3Q9BTC8 594 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 METTL22Q9BUU2 404 aaPredicted RBP3.97□□□□□ -1.77
VIM-210ENST00000637053 PBX4Q9BYU1 374 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 ADAM19Q9H013 955 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.97□□□□□ -1.77
VIM-210ENST00000637053 RPS6KL1Q9Y6S9 549 aa3.97□□□□□ -1.77
VIM-210ENST00000637053 H3BRJ5 948 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 KIF4AO95239 1232 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 DLGAP3O95886 979 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 CYP2E1P05181 493 aaPredicted RBP3.96□□□□□ -1.78
VIM-210ENST00000637053 DRD2P14416 443 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 WEE1P30291 646 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 PIP4K2BP78356 416 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 HYAL2Q12891 473 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 MYBPC2Q14324 1141 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 NFKBIBQ15653 356 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 CRTC2Q53ET0 693 aaPredicted RBP3.96□□□□□ -1.78
VIM-210ENST00000637053 NAALADL2Q58DX5 795 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 HDGFL1Q5TGJ6 251 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 KRBA2Q6ZNG9 492 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 DPH6Q7L8W6 267 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 C1QL4Q86Z23 238 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 ETFBKMTQ8IXQ9 262 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 CEP120Q8N960 986 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 BCL7CQ8WUZ0 217 aaPredicted RBP3.96□□□□□ -1.78
VIM-210ENST00000637053 VTI1AQ96AJ9 217 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 PBXIP1Q96AQ6 731 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 TMPRSS13Q9BYE2 586 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 PRKAG2Q9UGJ0 569 aa3.96□□□□□ -1.78
VIM-210ENST00000637053 CCDC194A0A1B0GVG4 234 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 SH3BP5O60239 455 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 EIF3JO75822 258 aaKnown RBP3.95□□□□□ -1.78
VIM-210ENST00000637053 PARNO95453 639 aaKnown RBP3.95□□□□□ -1.78
VIM-210ENST00000637053 PTPRAP18433 802 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 PTK7Q13308 1070 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 PLCL1Q15111 1095 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 PKN1Q16512 942 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 COX20Q5RI15 118 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 ZFYVE27Q5T4F4 411 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 RINLQ6ZS11 566 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 LCNL1Q6ZST4 164 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 TSHZ1Q6ZSZ6 1077 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 KSR1Q8IVT5 923 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 C12orf50Q8NA57 414 aaPredicted RBP3.95□□□□□ -1.78
VIM-210ENST00000637053 GLIS3Q8NEA6 775 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 FAM168AQ92567 244 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 WNT8BQ93098 351 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 SPACA7Q96KW9 195 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 TBC1D32Q96NH3 1257 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 PNMA2Q9UL42 364 aa3.95□□□□□ -1.78
VIM-210ENST00000637053 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.95□□□□□ -1.78
VIM-210ENST00000637053 SBNO2Q9Y2G9 1366 aa3.94□□□□□ -1.78
VIM-210ENST00000637053 B8ZZF3 427 aa3.94□□□□□ -1.78
VIM-210ENST00000637053 UBAP1LF5GYI3 381 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms