RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 LAMB1P07942 1786 aa22.9■■□□□ 1.26
CLN6-214ENST00000636314 IFIT1P09914 478 aaKnown RBP22.89■■□□□ 1.25
CLN6-214ENST00000636314 MFSD14BQ5SR56 506 aa22.89■■□□□ 1.25
CLN6-214ENST00000636314 SLC10A4Q96EP9 437 aa22.89■■□□□ 1.25
CLN6-214ENST00000636314 CFHR5Q9BXR6 569 aa22.89■■□□□ 1.25
CLN6-214ENST00000636314 DEFB129Q9H1M3 183 aa22.89■■□□□ 1.25
CLN6-214ENST00000636314 CIAO1O76071 339 aa22.88■■□□□ 1.25
CLN6-214ENST00000636314 ALDH1A1P00352 501 aa22.88■■□□□ 1.25
CLN6-214ENST00000636314 FBXO33Q7Z6M2 555 aa22.88■■□□□ 1.25
CLN6-214ENST00000636314 MANSC4A6NHS7 340 aaPredicted RBP22.87■■□□□ 1.25
CLN6-214ENST00000636314 FRAT2O75474 233 aaPredicted RBP22.87■■□□□ 1.25
CLN6-214ENST00000636314 SLC5A1P13866 664 aa22.87■■□□□ 1.25
CLN6-214ENST00000636314 FGFR2P21802 821 aa22.87■■□□□ 1.25
CLN6-214ENST00000636314 ATG9AQ7Z3C6 839 aa22.87■■□□□ 1.25
CLN6-214ENST00000636314 IQSEC3Q9UPP2 1182 aaPredicted RBP22.87■■□□□ 1.25
CLN6-214ENST00000636314 PCDHAC2Q9Y5I4 1007 aa22.87■■□□□ 1.25
CLN6-214ENST00000636314 SSC5DA1L4H1 1573 aa22.86■■□□□ 1.25
CLN6-214ENST00000636314 PPP1R12BO60237 982 aaPredicted RBP22.86■■□□□ 1.25
CLN6-214ENST00000636314 LPIN2Q92539 896 aa22.86■■□□□ 1.25
CLN6-214ENST00000636314 PA2G4Q9UQ80 394 aaKnown RBP22.86■■□□□ 1.25
CLN6-214ENST00000636314 CLRN2A0PK11 232 aa22.85■■□□□ 1.25
CLN6-214ENST00000636314 SRGAP3O43295 1099 aa22.85■■□□□ 1.25
CLN6-214ENST00000636314 MYO1BO43795 1136 aa22.85■■□□□ 1.25
CLN6-214ENST00000636314 CHAF1AQ13111 956 aaPredicted RBP22.85■■□□□ 1.25
CLN6-214ENST00000636314 CFAP100Q494V2 611 aa22.85■■□□□ 1.25
CLN6-214ENST00000636314 IFNL1Q8IU54 200 aa22.85■■□□□ 1.25
CLN6-214ENST00000636314 FTSJ3Q8IY81 847 aaKnown RBP22.85■■□□□ 1.25
CLN6-214ENST00000636314 TMEM57Q8N5G2 664 aa22.85■■□□□ 1.25
CLN6-214ENST00000636314 MTMR14Q8NCE2 650 aa22.85■■□□□ 1.25
CLN6-214ENST00000636314 WNK4Q96J92 1243 aa22.85■■□□□ 1.25
CLN6-214ENST00000636314 CLMNQ96JQ2 1002 aa22.85■■□□□ 1.25
CLN6-214ENST00000636314 VEZTQ9HBM0 779 aa22.85■■□□□ 1.25
CLN6-214ENST00000636314 CEP126Q9P2H0 1117 aa22.85■■□□□ 1.25
CLN6-214ENST00000636314 PPP2R3BQ9Y5P8 575 aa22.85■■□□□ 1.25
CLN6-214ENST00000636314 GNAI2P04899 355 aa22.84■■□□□ 1.25
CLN6-214ENST00000636314 IL15P40933 162 aaPredicted RBP22.84■■□□□ 1.25
CLN6-214ENST00000636314 BCAMP50895 628 aa22.84■■□□□ 1.25
CLN6-214ENST00000636314 RBM5P52756 815 aaKnown RBP eCLIP22.84■■□□□ 1.25
CLN6-214ENST00000636314 INHBEP58166 350 aa22.84■■□□□ 1.25
CLN6-214ENST00000636314 COPRSQ9NQ92 184 aa22.84■■□□□ 1.25
CLN6-214ENST00000636314 TTF2Q9UNY4 1162 aaKnown RBP22.84■■□□□ 1.25
CLN6-214ENST00000636314 TRIM17Q9Y577 477 aa22.84■■□□□ 1.25
CLN6-214ENST00000636314 OTOFQ9HC10 1997 aa22.83■■□□□ 1.25
CLN6-214ENST00000636314 SPDYE2BA6NHP3 402 aa22.83■■□□□ 1.25
CLN6-214ENST00000636314 SPDYE6P0CI01 402 aa22.83■■□□□ 1.25
CLN6-214ENST00000636314 ZBTB48P10074 688 aaPredicted RBP22.83■■□□□ 1.25
CLN6-214ENST00000636314 MTX1Q13505 466 aa22.83■■□□□ 1.25
CLN6-214ENST00000636314 MAP3K11Q16584 847 aa22.83■■□□□ 1.25
CLN6-214ENST00000636314 ATP2B3Q16720 1220 aa22.83■■□□□ 1.25
CLN6-214ENST00000636314 TBC1D22AQ8WUA7 517 aa22.83■■□□□ 1.25
CLN6-214ENST00000636314 SUPT20HL1Q3ZLR7 823 aa22.82■■□□□ 1.24
CLN6-214ENST00000636314 IGF2BP3O00425 579 aaKnown RBP eCLIP22.81■■□□□ 1.24
CLN6-214ENST00000636314 PRMT6Q96LA8 375 aaPredicted RBP22.81■■□□□ 1.24
CLN6-214ENST00000636314 SERPINA10Q9UK55 444 aa22.81■■□□□ 1.24
CLN6-214ENST00000636314 IREB2P48200 963 aaKnown RBP22.8■■□□□ 1.24
CLN6-214ENST00000636314 NBPF12Q5TAG4 269 aaPredicted RBP22.8■■□□□ 1.24
CLN6-214ENST00000636314 OTOP1Q7RTM1 612 aa22.8■■□□□ 1.24
CLN6-214ENST00000636314 DZIP1LQ8IYY4 767 aaKnown RBP22.8■■□□□ 1.24
CLN6-214ENST00000636314 HTTP42858 3142 aa22.8■■□□□ 1.24
CLN6-214ENST00000636314 RBBP6Q7Z6E9 1792 aaKnown RBP22.79■■□□□ 1.24
CLN6-214ENST00000636314 ITPRIPQ8IWB1 547 aa22.79■■□□□ 1.24
CLN6-214ENST00000636314 AOX1Q06278 1338 aa22.79■■□□□ 1.24
CLN6-214ENST00000636314 OTUD7BQ6GQQ9 843 aa22.78■■□□□ 1.24
CLN6-214ENST00000636314 ERO1AQ96HE7 468 aa22.78■■□□□ 1.24
CLN6-214ENST00000636314 UNCXA6NJT0 531 aa22.77■■□□□ 1.24
CLN6-214ENST00000636314 GJA5P36382 358 aa22.77■■□□□ 1.24
CLN6-214ENST00000636314 CRKP46108 304 aa22.77■■□□□ 1.24
CLN6-214ENST00000636314 RASA3Q14644 834 aa22.77■■□□□ 1.24
CLN6-214ENST00000636314 GRIK5Q16478 980 aa22.77■■□□□ 1.24
CLN6-214ENST00000636314 CD99L2Q8TCZ2 262 aa22.77■■□□□ 1.24
CLN6-214ENST00000636314 GNL3LQ9NVN8 582 aaKnown RBP22.77■■□□□ 1.24
CLN6-214ENST00000636314 MAST3O60307 1309 aa22.77■■□□□ 1.24
CLN6-214ENST00000636314 CENPFP49454 3210 aa22.76■■□□□ 1.23
CLN6-214ENST00000636314 PNMA6EA0A0J9YXQ4 647 aa22.76■■□□□ 1.23
CLN6-214ENST00000636314 USP2O75604 605 aaPredicted RBP22.76■■□□□ 1.23
CLN6-214ENST00000636314 RLBP1P12271 317 aa22.76■■□□□ 1.23
CLN6-214ENST00000636314 CRHR2Q13324 411 aa22.76■■□□□ 1.23
CLN6-214ENST00000636314 ANKRD13AQ8IZ07 590 aa22.76■■□□□ 1.23
CLN6-214ENST00000636314 POTEFA5A3E0 1075 aa22.75■■□□□ 1.23
CLN6-214ENST00000636314 HDLBPQ00341 1268 aaKnown RBP22.75■■□□□ 1.23
CLN6-214ENST00000636314 TNFAIP1Q13829 316 aa22.75■■□□□ 1.23
CLN6-214ENST00000636314 SPDYE2Q495Y8 402 aa22.75■■□□□ 1.23
CLN6-214ENST00000636314 WDR66Q8TBY9 1149 aa22.75■■□□□ 1.23
CLN6-214ENST00000636314 ELP3Q9H9T3 547 aa22.75■■□□□ 1.23
CLN6-214ENST00000636314 SUGT1Q9Y2Z0 365 aa22.75■■□□□ 1.23
CLN6-214ENST00000636314 TFCP2Q12800 502 aa22.74■■□□□ 1.23
CLN6-214ENST00000636314 TEKT1Q969V4 418 aa22.74■■□□□ 1.23
CLN6-214ENST00000636314 TDRD3Q9H7E2 651 aaKnown RBP22.74■■□□□ 1.23
CLN6-214ENST00000636314 ZNF70Q9UC06 446 aaPredicted RBP22.74■■□□□ 1.23
CLN6-214ENST00000636314 AKAP2Q9Y2D5 859 aa22.74■■□□□ 1.23
CLN6-214ENST00000636314 PTPN22Q9Y2R2 807 aa22.74■■□□□ 1.23
CLN6-214ENST00000636314 ADORA1P30542 326 aa22.73■■□□□ 1.23
CLN6-214ENST00000636314 PHKA1P46020 1223 aa22.73■■□□□ 1.23
CLN6-214ENST00000636314 GCC1Q96CN9 775 aa22.73■■□□□ 1.23
CLN6-214ENST00000636314 C1orf115Q9H7X2 142 aa22.73■■□□□ 1.23
CLN6-214ENST00000636314 EFCC1Q9HA90 598 aa22.73■■□□□ 1.23
CLN6-214ENST00000636314 MKI67P46013 3256 aaKnown RBP22.72■■□□□ 1.23
CLN6-214ENST00000636314 A0A1B0GUL7 405 aa22.72■■□□□ 1.23
CLN6-214ENST00000636314 SEMA3EO15041 775 aa22.72■■□□□ 1.23
CLN6-214ENST00000636314 G3BP1Q13283 466 aaKnown RBP eCLIP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms