RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 PCDHAC2Q9Y5I4 1007 aa22.67■■□□□ 1.22
CLN6-210ENST00000635747 UBE2Q2LH0YL09 131 aa22.66■■□□□ 1.22
CLN6-210ENST00000635747 TEKT1Q969V4 418 aa22.66■■□□□ 1.22
CLN6-210ENST00000635747 SEMA3EO15041 775 aa22.65■■□□□ 1.22
CLN6-210ENST00000635747 ZBTB22O15209 634 aa22.65■■□□□ 1.22
CLN6-210ENST00000635747 PPP1R12BO60237 982 aaPredicted RBP22.65■■□□□ 1.22
CLN6-210ENST00000635747 KIF23Q02241 960 aaPredicted RBP22.65■■□□□ 1.22
CLN6-210ENST00000635747 SPDYE2Q495Y8 402 aa22.65■■□□□ 1.22
CLN6-210ENST00000635747 RASAL3Q86YV0 1011 aa22.65■■□□□ 1.22
CLN6-210ENST00000635747 ZNF70Q9UC06 446 aaPredicted RBP22.65■■□□□ 1.22
CLN6-210ENST00000635747 MOB2Q70IA6 237 aa22.64■■□□□ 1.21
CLN6-210ENST00000635747 ZIC5Q96T25 663 aa22.64■■□□□ 1.21
CLN6-210ENST00000635747 DENND2AQ9ULE3 1009 aa22.64■■□□□ 1.21
CLN6-210ENST00000635747 UNCXA6NJT0 531 aa22.63■■□□□ 1.21
CLN6-210ENST00000635747 TNNI2P48788 182 aa22.63■■□□□ 1.21
CLN6-210ENST00000635747 RASA3Q14644 834 aa22.63■■□□□ 1.21
CLN6-210ENST00000635747 TDRD3Q9H7E2 651 aaKnown RBP22.63■■□□□ 1.21
CLN6-210ENST00000635747 MS4A1P11836 297 aa22.62■■□□□ 1.21
CLN6-210ENST00000635747 G3BP1Q13283 466 aaKnown RBP eCLIP22.62■■□□□ 1.21
CLN6-210ENST00000635747 GRIK5Q16478 980 aa22.62■■□□□ 1.21
CLN6-210ENST00000635747 HHIPL2Q6UWX4 724 aa22.62■■□□□ 1.21
CLN6-210ENST00000635747 ITPRIPQ8IWB1 547 aa22.62■■□□□ 1.21
CLN6-210ENST00000635747 ZDHHC15Q96MV8 337 aa22.62■■□□□ 1.21
CLN6-210ENST00000635747 SAGE1Q9NXZ1 904 aa22.62■■□□□ 1.21
CLN6-210ENST00000635747 ANGEL1Q9UNK9 670 aaKnown RBP22.62■■□□□ 1.21
CLN6-210ENST00000635747 PRKG1Q13976 671 aa22.61■■□□□ 1.21
CLN6-210ENST00000635747 MAP3K11Q16584 847 aa22.61■■□□□ 1.21
CLN6-210ENST00000635747 LDLRAD1Q5T700 205 aa22.61■■□□□ 1.21
CLN6-210ENST00000635747 CSRNP1Q96S65 589 aa22.61■■□□□ 1.21
CLN6-210ENST00000635747 AOX1Q06278 1338 aa22.6■■□□□ 1.21
CLN6-210ENST00000635747 ARAP2Q8WZ64 1704 aa22.6■■□□□ 1.21
CLN6-210ENST00000635747 ECM29Q5VYK3 1845 aa22.6■■□□□ 1.21
CLN6-210ENST00000635747 TIMM10P62072 90 aa22.6■■□□□ 1.21
CLN6-210ENST00000635747 TFCP2Q12800 502 aa22.6■■□□□ 1.21
CLN6-210ENST00000635747 MVPQ14764 893 aaKnown RBP22.6■■□□□ 1.21
CLN6-210ENST00000635747 CCDC102BQ68D86 513 aa22.6■■□□□ 1.21
CLN6-210ENST00000635747 ZGPATQ8N5A5 531 aaKnown RBP22.6■■□□□ 1.21
CLN6-210ENST00000635747 TMOD2Q9NZR1 351 aa22.6■■□□□ 1.21
CLN6-210ENST00000635747 SALL1Q9NSC2 1324 aa22.59■■□□□ 1.21
CLN6-210ENST00000635747 PNMA6EA0A0J9YXQ4 647 aa22.59■■□□□ 1.21
CLN6-210ENST00000635747 A0A1B0GUL7 405 aa22.59■■□□□ 1.21
CLN6-210ENST00000635747 ZBTB7BO15156 539 aaPredicted RBP22.59■■□□□ 1.21
CLN6-210ENST00000635747 PHKA1P46020 1223 aa22.59■■□□□ 1.21
CLN6-210ENST00000635747 ATP8B2P98198 1209 aa22.59■■□□□ 1.21
CLN6-210ENST00000635747 NBPF12Q5TAG4 269 aaPredicted RBP22.59■■□□□ 1.21
CLN6-210ENST00000635747 LDHBP07195 334 aaKnown RBP22.58■■□□□ 1.21
CLN6-210ENST00000635747 IREB2P48200 963 aaKnown RBP22.58■■□□□ 1.21
CLN6-210ENST00000635747 FKBP1CQ5VVH2 108 aa22.58■■□□□ 1.21
CLN6-210ENST00000635747 SLC10A4Q96EP9 437 aa22.58■■□□□ 1.21
CLN6-210ENST00000635747 TSKSQ9UJT2 592 aa22.58■■□□□ 1.21
CLN6-210ENST00000635747 PDS5AQ29RF7 1337 aaKnown RBP22.57■■□□□ 1.2
CLN6-210ENST00000635747 TCP10L2B9ZVM9 353 aa22.57■■□□□ 1.2
CLN6-210ENST00000635747 RLBP1P12271 317 aa22.57■■□□□ 1.2
CLN6-210ENST00000635747 ADORA1P30542 326 aa22.57■■□□□ 1.2
CLN6-210ENST00000635747 POLA2Q14181 598 aa22.57■■□□□ 1.2
CLN6-210ENST00000635747 APOBEC3HQ6NTF7 200 aaKnown RBP22.57■■□□□ 1.2
CLN6-210ENST00000635747 SSH3Q8TE77 659 aa22.57■■□□□ 1.2
CLN6-210ENST00000635747 XAGE2Q96GT9 111 aa22.57■■□□□ 1.2
CLN6-210ENST00000635747 NEUROD6Q96NK8 337 aa22.57■■□□□ 1.2
CLN6-210ENST00000635747 GORABQ5T7V8 394 aa22.56■■□□□ 1.2
CLN6-210ENST00000635747 FAM83AQ86UY5 434 aa22.56■■□□□ 1.2
CLN6-210ENST00000635747 HOOK2Q96ED9 719 aa22.56■■□□□ 1.2
CLN6-210ENST00000635747 RNF186Q9NXI6 227 aa22.56■■□□□ 1.2
CLN6-210ENST00000635747 TRPA1O75762 1119 aa22.55■■□□□ 1.2
CLN6-210ENST00000635747 SREBF2Q12772 1141 aa22.55■■□□□ 1.2
CLN6-210ENST00000635747 SPTY2D1Q68D10 685 aaPredicted RBP22.55■■□□□ 1.2
CLN6-210ENST00000635747 USP2O75604 605 aaPredicted RBP22.54■■□□□ 1.2
CLN6-210ENST00000635747 PRDX5P30044 214 aa22.54■■□□□ 1.2
CLN6-210ENST00000635747 TM4SF4P48230 202 aa22.54■■□□□ 1.2
CLN6-210ENST00000635747 SLF2Q8IX21 1173 aa22.54■■□□□ 1.2
CLN6-210ENST00000635747 ANKRD13AQ8IZ07 590 aa22.54■■□□□ 1.2
CLN6-210ENST00000635747 TEPSINQ96N21 525 aa22.54■■□□□ 1.2
CLN6-210ENST00000635747 GPR108Q9NPR9 543 aa22.54■■□□□ 1.2
CLN6-210ENST00000635747 ZBTB48P10074 688 aaPredicted RBP22.53■■□□□ 1.2
CLN6-210ENST00000635747 INHBEP58166 350 aa22.53■■□□□ 1.2
CLN6-210ENST00000635747 OS9Q13438 667 aaPredicted RBP22.53■■□□□ 1.2
CLN6-210ENST00000635747 RASGRF1Q13972 1273 aa22.53■■□□□ 1.2
CLN6-210ENST00000635747 SPRYD7Q5W111 196 aa22.53■■□□□ 1.2
CLN6-210ENST00000635747 TMEM39BQ9GZU3 492 aa22.53■■□□□ 1.2
CLN6-210ENST00000635747 SSC5DA1L4H1 1573 aa22.53■■□□□ 1.2
CLN6-210ENST00000635747 SURF6O75683 361 aaKnown RBP22.52■■□□□ 1.2
CLN6-210ENST00000635747 FZD1Q9UP38 647 aa22.52■■□□□ 1.2
CLN6-210ENST00000635747 DAGLAQ9Y4D2 1042 aa22.52■■□□□ 1.2
CLN6-210ENST00000635747 PANK1Q8TE04 598 aa22.51■■□□□ 1.19
CLN6-210ENST00000635747 CHMP4BQ9H444 224 aaKnown RBP22.51■■□□□ 1.19
CLN6-210ENST00000635747 C1orf115Q9H7X2 142 aa22.51■■□□□ 1.19
CLN6-210ENST00000635747 RCAN3Q9UKA8 241 aa22.51■■□□□ 1.19
CLN6-210ENST00000635747 NOP58Q9Y2X3 529 aaKnown RBP22.51■■□□□ 1.19
CLN6-210ENST00000635747 MYH13Q9UKX3 1938 aa22.51■■□□□ 1.19
CLN6-210ENST00000635747 MANSC4A6NHS7 340 aaPredicted RBP22.5■■□□□ 1.19
CLN6-210ENST00000635747 UQCRFS1P1P0C7P4 283 aa22.5■■□□□ 1.19
CLN6-210ENST00000635747 CACNB3P54284 484 aa22.5■■□□□ 1.19
CLN6-210ENST00000635747 MKRN3Q13064 507 aaKnown RBP22.5■■□□□ 1.19
CLN6-210ENST00000635747 DIXDC1Q155Q3 683 aa22.5■■□□□ 1.19
CLN6-210ENST00000635747 DZIP1Q86YF9 867 aaKnown RBP22.5■■□□□ 1.19
CLN6-210ENST00000635747 ABCF2Q9UG63 623 aa22.5■■□□□ 1.19
CLN6-210ENST00000635747 CDC42EP5Q6NZY7 148 aa22.49■■□□□ 1.19
CLN6-210ENST00000635747 ERICH6Q7L0X2 663 aa22.49■■□□□ 1.19
CLN6-210ENST00000635747 WNK4Q96J92 1243 aa22.49■■□□□ 1.19
CLN6-210ENST00000635747 CLMNQ96JQ2 1002 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 217.6 ms