RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 METAP2P50579 478 aaKnown RBP eCLIP16.71■□□□□ 0.273e-8■■□□□ 14.5
PTBP1-221ENST00000635647 RABL6Q3YEC7 729 aaPredicted RBP16.71■□□□□ 0.27
PTBP1-221ENST00000635647 TMEM67Q5HYA8 995 aa16.71■□□□□ 0.27
PTBP1-221ENST00000635647 CCDC191Q8NCU4 936 aa16.71■□□□□ 0.27
PTBP1-221ENST00000635647 ANKRD18BA2A2Z9 1011 aa16.71■□□□□ 0.27
PTBP1-221ENST00000635647 SFPQP23246 707 aaKnown RBP eCLIP16.71■□□□□ 0.274e-7■■□□□ 12.7
PTBP1-221ENST00000635647 KCNQ4P56696 695 aa16.71■□□□□ 0.27
PTBP1-221ENST00000635647 USP27XA6NNY8 438 aa16.71■□□□□ 0.26
PTBP1-221ENST00000635647 GOLGA8AA7E2F4 631 aa16.71■□□□□ 0.26
PTBP1-221ENST00000635647 RANBP6O60518 1105 aaKnown RBP16.71■□□□□ 0.26
PTBP1-221ENST00000635647 OLFM4Q6UX06 510 aa16.71■□□□□ 0.26
PTBP1-221ENST00000635647 CADPS2Q86UW7 1296 aa16.71■□□□□ 0.26
PTBP1-221ENST00000635647 LRRC8AQ8IWT6 810 aa16.71■□□□□ 0.26
PTBP1-221ENST00000635647 CARMIL3Q8ND23 1372 aa16.7■□□□□ 0.26
PTBP1-221ENST00000635647 DPCR1Q3MIW9 517 aa16.7■□□□□ 0.26
PTBP1-221ENST00000635647 KRT222Q8N1A0 295 aa16.7■□□□□ 0.26
PTBP1-221ENST00000635647 KDM6AO15550 1401 aaPredicted RBP16.7■□□□□ 0.26
PTBP1-221ENST00000635647 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
PTBP1-221ENST00000635647 CAVIN2O95810 425 aa16.69■□□□□ 0.26
PTBP1-221ENST00000635647 PRDM1O75626 825 aa16.69■□□□□ 0.26
PTBP1-221ENST00000635647 ZSWIM4Q9H7M6 989 aa16.69■□□□□ 0.26
PTBP1-221ENST00000635647 PLA2G4DQ86XP0 818 aa16.69■□□□□ 0.26
PTBP1-221ENST00000635647 SMARCC2Q8TAQ2 1214 aa16.69■□□□□ 0.26
PTBP1-221ENST00000635647 LTN1O94822 1766 aa16.69■□□□□ 0.26
PTBP1-221ENST00000635647 SMTNL1A8MU46 457 aa16.68■□□□□ 0.26
PTBP1-221ENST00000635647 ZNF202O95125 648 aa16.68■□□□□ 0.26
PTBP1-221ENST00000635647 ITGA6P23229 1130 aa16.68■□□□□ 0.26
PTBP1-221ENST00000635647 SYKP43405 635 aa16.68■□□□□ 0.26
PTBP1-221ENST00000635647 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.68■□□□□ 0.26
PTBP1-221ENST00000635647 KCNG4Q8TDN1 519 aa16.68■□□□□ 0.26
PTBP1-221ENST00000635647 ZNF274Q96GC6 653 aaPredicted RBP16.68■□□□□ 0.26
PTBP1-221ENST00000635647 DENND2AQ9ULE3 1009 aa16.68■□□□□ 0.26
PTBP1-221ENST00000635647 SLC12A7Q9Y666 1083 aa16.68■□□□□ 0.26
PTBP1-221ENST00000635647 IL2RBP14784 551 aa16.68■□□□□ 0.26
PTBP1-221ENST00000635647 PIP4K2BP78356 416 aa16.68■□□□□ 0.26
PTBP1-221ENST00000635647 XPO4Q9C0E2 1151 aaKnown RBP16.68■□□□□ 0.26
PTBP1-221ENST00000635647 IRS4O14654 1257 aaPredicted RBP16.68■□□□□ 0.26
PTBP1-221ENST00000635647 IARSP41252 1262 aaKnown RBP16.68■□□□□ 0.26
PTBP1-221ENST00000635647 CTDSPL2Q05D32 466 aa16.68■□□□□ 0.26
PTBP1-221ENST00000635647 KIF18AQ8NI77 898 aa16.68■□□□□ 0.26
PTBP1-221ENST00000635647 UBAC1Q9BSL1 405 aa16.68■□□□□ 0.26
PTBP1-221ENST00000635647 ALDH8A1Q9H2A2 487 aaPredicted RBP16.68■□□□□ 0.26
PTBP1-221ENST00000635647 TMEM51Q9NW97 253 aa16.68■□□□□ 0.26
PTBP1-221ENST00000635647 MYSM1Q5VVJ2 828 aa16.67■□□□□ 0.26
PTBP1-221ENST00000635647 APPBP2Q92624 585 aa16.67■□□□□ 0.26
PTBP1-221ENST00000635647 BTG4Q9NY30 223 aa16.67■□□□□ 0.26
PTBP1-221ENST00000635647 HEG1Q9ULI3 1381 aa16.67■□□□□ 0.26
PTBP1-221ENST00000635647 EXOSC10Q01780 885 aaKnown RBP16.67■□□□□ 0.26
PTBP1-221ENST00000635647 MAGEB6Q8N7X4 407 aa16.67■□□□□ 0.26
PTBP1-221ENST00000635647 MNS1Q8NEH6 495 aa16.67■□□□□ 0.26
PTBP1-221ENST00000635647 FEZ1Q99689 392 aa16.67■□□□□ 0.26
PTBP1-221ENST00000635647 RGPD2P0DJD1 1756 aa16.67■□□□□ 0.26
PTBP1-221ENST00000635647 ANO1Q5XXA6 986 aa16.67■□□□□ 0.26
PTBP1-221ENST00000635647 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.67■□□□□ 0.26
PTBP1-221ENST00000635647 PAXBP1Q9Y5B6 917 aa16.67■□□□□ 0.26
PTBP1-221ENST00000635647 MEGF6O75095 1541 aa16.66■□□□□ 0.26
PTBP1-221ENST00000635647 SNW1Q13573 536 aaKnown RBP16.66■□□□□ 0.26
PTBP1-221ENST00000635647 SART3Q15020 963 aaKnown RBP16.66■□□□□ 0.26
PTBP1-221ENST00000635647 ADALQ6DHV7 355 aa16.66■□□□□ 0.26
PTBP1-221ENST00000635647 ST7Q9NRC1 585 aa16.66■□□□□ 0.26
PTBP1-221ENST00000635647 TMEM94Q12767 1356 aa16.66■□□□□ 0.26
PTBP1-221ENST00000635647 ZFYP08048 801 aaPredicted RBP16.66■□□□□ 0.26
PTBP1-221ENST00000635647 DHX8Q14562 1220 aaKnown RBP16.66■□□□□ 0.26
PTBP1-221ENST00000635647 IQCB1Q15051 598 aa16.66■□□□□ 0.26
PTBP1-221ENST00000635647 TRIM22Q8IYM9 498 aa16.66■□□□□ 0.26
PTBP1-221ENST00000635647 CNNM3Q8NE01 707 aa16.66■□□□□ 0.26
PTBP1-221ENST00000635647 CLIC6Q96NY7 704 aa16.66■□□□□ 0.26
PTBP1-221ENST00000635647 KIAA1468Q9P260 1216 aa16.66■□□□□ 0.26
PTBP1-221ENST00000635647 PCDH11XQ9BZA7 1347 aa16.66■□□□□ 0.26
PTBP1-221ENST00000635647 PCDH11YQ9BZA8 1340 aa16.66■□□□□ 0.26
PTBP1-221ENST00000635647 FDPSP14324 419 aaKnown RBP16.66■□□□□ 0.26
PTBP1-221ENST00000635647 GOLGA8FQ08AF8 430 aa16.66■□□□□ 0.26
PTBP1-221ENST00000635647 GOLGA8DPQ0D2H9 430 aa16.66■□□□□ 0.26
PTBP1-221ENST00000635647 SAMD1Q6SPF0 538 aaPredicted RBP16.66■□□□□ 0.26
PTBP1-221ENST00000635647 FBXO18Q8NFZ0 1043 aa16.66■□□□□ 0.26
PTBP1-221ENST00000635647 ARMT1Q9H993 441 aa16.66■□□□□ 0.26
PTBP1-221ENST00000635647 AFMP43652 599 aa16.65■□□□□ 0.26
PTBP1-221ENST00000635647 TCIRG1Q13488 830 aa16.65■□□□□ 0.26
PTBP1-221ENST00000635647 SYT10Q6XYQ8 523 aa16.65■□□□□ 0.26
PTBP1-221ENST00000635647 JMYQ8N9B5 988 aa16.65■□□□□ 0.26
PTBP1-221ENST00000635647 GREM2Q9H772 168 aa16.65■□□□□ 0.26
PTBP1-221ENST00000635647 CALCOCO1Q9P1Z2 691 aa16.65■□□□□ 0.26
PTBP1-221ENST00000635647 NFAT5O94916 1531 aa16.65■□□□□ 0.26
PTBP1-221ENST00000635647 ZBTB43O43298 467 aa16.65■□□□□ 0.26
PTBP1-221ENST00000635647 PFKFB1P16118 471 aa16.65■□□□□ 0.26
PTBP1-221ENST00000635647 ELF2Q15723 593 aa16.65■□□□□ 0.26
PTBP1-221ENST00000635647 LINC00301Q8NCQ3 95 aa16.65■□□□□ 0.26
PTBP1-221ENST00000635647 NOL10Q9BSC4 688 aaKnown RBP16.65■□□□□ 0.26
PTBP1-221ENST00000635647 ZNF215Q9UL58 517 aaPredicted RBP16.65■□□□□ 0.26
PTBP1-221ENST00000635647 KCNJ14Q9UNX9 436 aa16.65■□□□□ 0.26
PTBP1-221ENST00000635647 LRRC37A3O60309 1634 aa16.64■□□□□ 0.25
PTBP1-221ENST00000635647 STX17P56962 302 aa16.64■□□□□ 0.25
PTBP1-221ENST00000635647 STAMQ92783 540 aa16.64■□□□□ 0.25
PTBP1-221ENST00000635647 NEMFO60524 1076 aa16.64■□□□□ 0.25
PTBP1-221ENST00000635647 CDKL5O76039 1030 aa16.64■□□□□ 0.25
PTBP1-221ENST00000635647 URI1O94763 535 aaPredicted RBP16.64■□□□□ 0.25
PTBP1-221ENST00000635647 MBD4O95243 580 aa16.64■□□□□ 0.25
PTBP1-221ENST00000635647 CASP7P55210 303 aa16.64■□□□□ 0.25
PTBP1-221ENST00000635647 UBASH3AP57075 661 aa16.64■□□□□ 0.25
PTBP1-221ENST00000635647 NCBP1Q09161 790 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms