RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 CYP2E1P05181 493 aaPredicted RBP4.51□□□□□ -1.69
PSPC1-208ENST00000635562 HP1BP3Q5SSJ5 553 aaPredicted RBP4.51□□□□□ -1.69
PSPC1-208ENST00000635562 NUTM2GQ5VZR2 741 aa4.51□□□□□ -1.69
PSPC1-208ENST00000635562 TMEM102Q8N9M5 508 aaPredicted RBP4.51□□□□□ -1.69
PSPC1-208ENST00000635562 DMRTB1Q96MA1 342 aa4.51□□□□□ -1.69
PSPC1-208ENST00000635562 FBXL18Q96ME1 805 aa4.51□□□□□ -1.69
PSPC1-208ENST00000635562 GGNBP2Q9H3C7 697 aa4.51□□□□□ -1.69
PSPC1-208ENST00000635562 DZANK1Q9NVP4 752 aa4.51□□□□□ -1.69
PSPC1-208ENST00000635562 TMEM63CQ9P1W3 806 aa4.51□□□□□ -1.69
PSPC1-208ENST00000635562 SOX13Q9UN79 622 aa4.51□□□□□ -1.69
PSPC1-208ENST00000635562 LEMD3Q9Y2U8 911 aa4.51□□□□□ -1.69
PSPC1-208ENST00000635562 WDR64B1ANS9 1081 aa4.5□□□□□ -1.69
PSPC1-208ENST00000635562 EDN3P14138 238 aa4.5□□□□□ -1.69
PSPC1-208ENST00000635562 FOSL1P15407 271 aa4.5□□□□□ -1.69
PSPC1-208ENST00000635562 MAP4P27816 1152 aaKnown RBP4.5□□□□□ -1.69
PSPC1-208ENST00000635562 USP5P45974 858 aa4.5□□□□□ -1.69
PSPC1-208ENST00000635562 NLRP12P59046 1061 aa4.5□□□□□ -1.69
PSPC1-208ENST00000635562 EHHADHQ08426 723 aa4.5□□□□□ -1.69
PSPC1-208ENST00000635562 IKBKEQ14164 716 aa4.5□□□□□ -1.69
PSPC1-208ENST00000635562 SMG8Q8ND04 991 aaKnown RBP4.5□□□□□ -1.69
PSPC1-208ENST00000635562 SLC7A3Q8WY07 619 aa4.5□□□□□ -1.69
PSPC1-208ENST00000635562 BSNDQ8WZ55 320 aa4.5□□□□□ -1.69
PSPC1-208ENST00000635562 ZNF428Q96B54 188 aa4.5□□□□□ -1.69
PSPC1-208ENST00000635562 PUS7Q96PZ0 661 aaKnown RBP4.5□□□□□ -1.69
PSPC1-208ENST00000635562 OSBPL1AQ9BXW6 950 aa4.5□□□□□ -1.69
PSPC1-208ENST00000635562 CHMP4AQ9BY43 222 aa4.5□□□□□ -1.69
PSPC1-208ENST00000635562 ZFYVE1Q9HBF4 777 aa4.5□□□□□ -1.69
PSPC1-208ENST00000635562 KANSL3Q9P2N6 904 aa4.5□□□□□ -1.69
PSPC1-208ENST00000635562 UNCXA6NJT0 531 aa4.49□□□□□ -1.69
PSPC1-208ENST00000635562 NFKBIEO00221 500 aa4.49□□□□□ -1.69
PSPC1-208ENST00000635562 DDX3YO15523 660 aaKnown RBP4.49□□□□□ -1.69
PSPC1-208ENST00000635562 PRNPP04156 253 aa4.49□□□□□ -1.69
PSPC1-208ENST00000635562 P4HBP07237 508 aaKnown RBP4.49□□□□□ -1.69
PSPC1-208ENST00000635562 ZNF16P17020 682 aaPredicted RBP4.49□□□□□ -1.69
PSPC1-208ENST00000635562 DNM1Q05193 864 aaKnown RBP4.49□□□□□ -1.69
PSPC1-208ENST00000635562 PDE3BQ13370 1112 aa4.49□□□□□ -1.69
PSPC1-208ENST00000635562 PAOXQ6QHF9 649 aa4.49□□□□□ -1.69
PSPC1-208ENST00000635562 VSIG10LQ86VR7 867 aa4.49□□□□□ -1.69
PSPC1-208ENST00000635562 MFSD14AQ96MC6 490 aa4.49□□□□□ -1.69
PSPC1-208ENST00000635562 TMPRSS13Q9BYE2 586 aa4.49□□□□□ -1.69
PSPC1-208ENST00000635562 ADGRE2Q9UHX3 823 aa4.49□□□□□ -1.69
PSPC1-208ENST00000635562 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
PSPC1-208ENST00000635562 FAM95CA0A1B0GW59 222 aa4.48□□□□□ -1.69
PSPC1-208ENST00000635562 TIAF1O95411 115 aa4.48□□□□□ -1.69
PSPC1-208ENST00000635562 RXRBP28702 533 aa4.48□□□□□ -1.69
PSPC1-208ENST00000635562 TAGLNQ01995 201 aaKnown RBP4.48□□□□□ -1.69
PSPC1-208ENST00000635562 AAMPQ13685 434 aa4.48□□□□□ -1.69
PSPC1-208ENST00000635562 ADAMTSL4Q6UY14 1074 aa4.48□□□□□ -1.69
PSPC1-208ENST00000635562 C1orf127Q8N9H9 656 aa4.48□□□□□ -1.69
PSPC1-208ENST00000635562 SNX29Q8TEQ0 813 aa4.48□□□□□ -1.69
PSPC1-208ENST00000635562 BCL2L13Q9BXK5 485 aa4.48□□□□□ -1.69
PSPC1-208ENST00000635562 CNTN3Q9P232 1028 aa4.48□□□□□ -1.69
PSPC1-208ENST00000635562 A6NHS1 94 aa4.47□□□□□ -1.69
PSPC1-208ENST00000635562 ADAMTS4O75173 837 aa4.47□□□□□ -1.69
PSPC1-208ENST00000635562 JUNBP17275 347 aaPredicted RBP4.47□□□□□ -1.69
PSPC1-208ENST00000635562 USP11P51784 963 aa4.47□□□□□ -1.69
PSPC1-208ENST00000635562 PLCB3Q01970 1234 aa4.47□□□□□ -1.69
PSPC1-208ENST00000635562 CYP27A1Q02318 531 aa4.47□□□□□ -1.69
PSPC1-208ENST00000635562 ENOX2Q16206 610 aaKnown RBP4.47□□□□□ -1.69
PSPC1-208ENST00000635562 MSMPQ1L6U9 139 aa4.47□□□□□ -1.69
PSPC1-208ENST00000635562 SGO2Q562F6 1265 aa4.47□□□□□ -1.69
PSPC1-208ENST00000635562 EXOSC6Q5RKV6 272 aaKnown RBP4.47□□□□□ -1.69
PSPC1-208ENST00000635562 C12orf50Q8NA57 414 aaPredicted RBP4.47□□□□□ -1.69
PSPC1-208ENST00000635562 AGBL5Q8NDL9 886 aa4.47□□□□□ -1.69
PSPC1-208ENST00000635562 NXPE3Q969Y0 559 aa4.47□□□□□ -1.69
PSPC1-208ENST00000635562 ASIC4Q96FT7 647 aa4.47□□□□□ -1.69
PSPC1-208ENST00000635562 OSMRQ99650 979 aa4.47□□□□□ -1.69
PSPC1-208ENST00000635562 USP26Q9BXU7 913 aa4.47□□□□□ -1.69
PSPC1-208ENST00000635562 BHLHE41Q9C0J9 482 aaPredicted RBP4.47□□□□□ -1.69
PSPC1-208ENST00000635562 NIF3L1Q9GZT8 377 aa4.47□□□□□ -1.69
PSPC1-208ENST00000635562 BSDC1Q9NW68 430 aaPredicted RBP4.47□□□□□ -1.69
PSPC1-208ENST00000635562 CCDC39Q9UFE4 941 aa4.47□□□□□ -1.69
PSPC1-208ENST00000635562 LOC100289279A0A1B0GTE1 492 aa4.46□□□□□ -1.7
PSPC1-208ENST00000635562 PHACTR2O75167 634 aa4.46□□□□□ -1.7
PSPC1-208ENST00000635562 VAMP1P23763 118 aa4.46□□□□□ -1.7
PSPC1-208ENST00000635562 C8orf34Q49A92 452 aa4.46□□□□□ -1.7
PSPC1-208ENST00000635562 EAPPQ56P03 285 aaPredicted RBP4.46□□□□□ -1.7
PSPC1-208ENST00000635562 DDX54Q8TDD1 881 aaKnown RBP4.46□□□□□ -1.7
PSPC1-208ENST00000635562 GIPC2Q8TF65 315 aa4.46□□□□□ -1.7
PSPC1-208ENST00000635562 EZH1Q92800 747 aaPredicted RBP4.46□□□□□ -1.7
PSPC1-208ENST00000635562 ZKSCAN3Q9BRR0 538 aa4.46□□□□□ -1.7
PSPC1-208ENST00000635562 CHRDQ9H2X0 955 aa4.46□□□□□ -1.7
PSPC1-208ENST00000635562 KIAA1522Q9P206 1035 aaPredicted RBP4.46□□□□□ -1.7
PSPC1-208ENST00000635562 SOX1O00570 391 aaPredicted RBP4.45□□□□□ -1.7
PSPC1-208ENST00000635562 CYP26A1O43174 497 aa4.45□□□□□ -1.7
PSPC1-208ENST00000635562 TNFRSF21O75509 655 aa4.45□□□□□ -1.7
PSPC1-208ENST00000635562 F13BP05160 661 aa4.45□□□□□ -1.7
PSPC1-208ENST00000635562 RBM25P49756 843 aaKnown RBP4.45□□□□□ -1.7
PSPC1-208ENST00000635562 ORC1Q13415 861 aa4.45□□□□□ -1.7
PSPC1-208ENST00000635562 FZD5Q13467 585 aa4.45□□□□□ -1.7
PSPC1-208ENST00000635562 MAP7Q14244 749 aa4.45□□□□□ -1.7
PSPC1-208ENST00000635562 CBLL1Q75N03 491 aa4.45□□□□□ -1.7
PSPC1-208ENST00000635562 VN1R5Q7Z5H4 357 aa4.45□□□□□ -1.7
PSPC1-208ENST00000635562 ZAR1Q86SH2 424 aa4.45□□□□□ -1.7
PSPC1-208ENST00000635562 ABI1Q8IZP0 508 aa4.45□□□□□ -1.7
PSPC1-208ENST00000635562 FBXL6Q8N531 539 aa4.45□□□□□ -1.7
PSPC1-208ENST00000635562 TMC1Q8TDI8 760 aa4.45□□□□□ -1.7
PSPC1-208ENST00000635562 CSRNP1Q96S65 589 aa4.45□□□□□ -1.7
PSPC1-208ENST00000635562 DNAJC25Q9H1X3 360 aa4.45□□□□□ -1.7
PSPC1-208ENST00000635562 IGSF5Q9NSI5 407 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms