RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	MAST3	O60307	1309 aa		31.69	■■■□□ 2.66
UBE3A-222	ENST00000630907	PDE1A	P54750	535 aa		31.68	■■■□□ 2.66
UBE3A-222	ENST00000630907	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	31.68	■■■□□ 2.66
UBE3A-222	ENST00000630907	USP50	Q70EL3	339 aa	Predicted RBP	31.68	■■■□□ 2.66
UBE3A-222	ENST00000630907	PNMA8A	Q86V59	439 aa	Predicted RBP	31.68	■■■□□ 2.66
UBE3A-222	ENST00000630907	LRP2BP	Q9P2M1	347 aa		31.68	■■■□□ 2.66
UBE3A-222	ENST00000630907	GLRX3	O76003	335 aa	Known RBP	31.67	■■■□□ 2.66
UBE3A-222	ENST00000630907	TRPM4	Q8TD43	1214 aa		31.67	■■■□□ 2.66
UBE3A-222	ENST00000630907	PIH1D3	Q9NQM4	214 aa	Known RBP	31.67	■■■□□ 2.66
UBE3A-222	ENST00000630907	GOLIM4	O00461	696 aa		31.66	■■■□□ 2.66
UBE3A-222	ENST00000630907	TTF1	Q15361	905 aa	Predicted RBP	31.66	■■■□□ 2.66
UBE3A-222	ENST00000630907	KIF4B	Q2VIQ3	1234 aa		31.66	■■■□□ 2.66
UBE3A-222	ENST00000630907	EAPP	Q56P03	285 aa	Predicted RBP	31.66	■■■□□ 2.66
UBE3A-222	ENST00000630907	PLEKHM2	Q8IWE5	1019 aa		31.66	■■■□□ 2.66
UBE3A-222	ENST00000630907	PI4K2B	Q8TCG2	481 aa		31.66	■■■□□ 2.66
UBE3A-222	ENST00000630907	ANTXR1	Q9H6X2	564 aa		31.66	■■■□□ 2.66
UBE3A-222	ENST00000630907	RAI14	Q9P0K7	980 aa		31.66	■■■□□ 2.66
UBE3A-222	ENST00000630907	KIF3C	O14782	793 aa		31.65	■■■□□ 2.66
UBE3A-222	ENST00000630907	EGFR	P00533	1210 aa		31.65	■■■□□ 2.66
UBE3A-222	ENST00000630907	HDLBP	Q00341	1268 aa	Known RBP	31.65	■■■□□ 2.66
UBE3A-222	ENST00000630907	DZIP1	Q86YF9	867 aa	Known RBP	31.65	■■■□□ 2.66
UBE3A-222	ENST00000630907	MRI	Q9BWK5	157 aa		31.65	■■■□□ 2.66
UBE3A-222	ENST00000630907	PAG1	Q9NWQ8	432 aa		31.65	■■■□□ 2.66
UBE3A-222	ENST00000630907	SERPINA10	Q9UK55	444 aa		31.65	■■■□□ 2.66
UBE3A-222	ENST00000630907	PDE4A	P27815	886 aa		31.64	■■■□□ 2.66
UBE3A-222	ENST00000630907	CFAP100	Q494V2	611 aa		31.64	■■■□□ 2.66
UBE3A-222	ENST00000630907	CRK	P46108	304 aa		31.63	■■■□□ 2.65
UBE3A-222	ENST00000630907	RBM5	P52756	815 aa	Known RBP eCLIP	31.63	■■■□□ 2.65
UBE3A-222	ENST00000630907	HIRA	P54198	1017 aa	Predicted RBP	31.63	■■■□□ 2.65
UBE3A-222	ENST00000630907	DLGAP5	Q15398	846 aa		31.63	■■■□□ 2.65
UBE3A-222	ENST00000630907	TEKT1	Q969V4	418 aa		31.63	■■■□□ 2.65
UBE3A-222	ENST00000630907	EDC3	Q96F86	508 aa	Known RBP	31.63	■■■□□ 2.65
UBE3A-222	ENST00000630907	IGSF3	O75054	1194 aa		31.62	■■■□□ 2.65
UBE3A-222	ENST00000630907	MECOM	Q03112	1051 aa		31.62	■■■□□ 2.65
UBE3A-222	ENST00000630907	AOX1	Q06278	1338 aa		31.62	■■■□□ 2.65
UBE3A-222	ENST00000630907	MTMR14	Q8NCE2	650 aa		31.62	■■■□□ 2.65
UBE3A-222	ENST00000630907	IDH1	O75874	414 aa	Known RBP	31.61	■■■□□ 2.65
UBE3A-222	ENST00000630907	DIXDC1	Q155Q3	683 aa		31.61	■■■□□ 2.65
UBE3A-222	ENST00000630907	SLF2	Q8IX21	1173 aa		31.61	■■■□□ 2.65
UBE3A-222	ENST00000630907	OSBPL3	Q9H4L5	887 aa		31.61	■■■□□ 2.65
UBE3A-222	ENST00000630907	GSTO1	P78417	241 aa		31.6	■■■□□ 2.65
UBE3A-222	ENST00000630907	HHIPL2	Q6UWX4	724 aa		31.6	■■■□□ 2.65
UBE3A-222	ENST00000630907	NSUN4	Q96CB9	384 aa	Known RBP	31.6	■■■□□ 2.65
UBE3A-222	ENST00000630907	ZBED3	Q96IU2	234 aa	Predicted RBP	31.6	■■■□□ 2.65
UBE3A-222	ENST00000630907	CLEC11A	Q9Y240	323 aa		31.6	■■■□□ 2.65
UBE3A-222	ENST00000630907	WNT10B	O00744	389 aa		31.59	■■■□□ 2.65
UBE3A-222	ENST00000630907	MAP3K12	Q12852	859 aa		31.59	■■■□□ 2.65
UBE3A-222	ENST00000630907	PCDHAC2	Q9Y5I4	1007 aa		31.59	■■■□□ 2.65
UBE3A-222	ENST00000630907	SPDYE2B	A6NHP3	402 aa		31.58	■■■□□ 2.65
UBE3A-222	ENST00000630907	POTEI	P0CG38	1075 aa		31.58	■■■□□ 2.65
UBE3A-222	ENST00000630907	POTEJ	P0CG39	1038 aa		31.58	■■■□□ 2.65
UBE3A-222	ENST00000630907	SPDYE6	P0CI01	402 aa		31.58	■■■□□ 2.65
UBE3A-222	ENST00000630907	NBPF9	Q3BBW0	867 aa		31.58	■■■□□ 2.65
UBE3A-222	ENST00000630907	LDHD	Q86WU2	507 aa		31.58	■■■□□ 2.65
UBE3A-222	ENST00000630907	ZNF384	Q8TF68	577 aa		31.58	■■■□□ 2.65
UBE3A-222	ENST00000630907	PRMT6	Q96LA8	375 aa	Predicted RBP	31.58	■■■□□ 2.65
UBE3A-222	ENST00000630907	ZDHHC15	Q96MV8	337 aa		31.58	■■■□□ 2.65
UBE3A-222	ENST00000630907	MAP4K4	O95819	1239 aa	Predicted RBP	31.57	■■■□□ 2.64
UBE3A-222	ENST00000630907	LDHC	P07864	332 aa		31.57	■■■□□ 2.64
UBE3A-222	ENST00000630907	NAA16	Q6N069	864 aa	Predicted RBP	31.57	■■■□□ 2.64
UBE3A-222	ENST00000630907	ZC3H15	Q8WU90	426 aa	Known RBP	31.57	■■■□□ 2.64
UBE3A-222	ENST00000630907	FAM163A	Q96GL9	167 aa	Predicted RBP	31.56	■■■□□ 2.64
UBE3A-222	ENST00000630907	DAGLA	Q9Y4D2	1042 aa		31.56	■■■□□ 2.64
UBE3A-222	ENST00000630907	GAK	O14976	1311 aa		31.54	■■■□□ 2.64
UBE3A-222	ENST00000630907	MYO1B	O43795	1136 aa		31.54	■■■□□ 2.64
UBE3A-222	ENST00000630907	APOBEC3H	Q6NTF7	200 aa	Known RBP	31.54	■■■□□ 2.64
UBE3A-222	ENST00000630907	TMED8	Q6PL24	325 aa	Predicted RBP	31.54	■■■□□ 2.64
UBE3A-222	ENST00000630907	MAGEB6	Q8N7X4	407 aa		31.54	■■■□□ 2.64
UBE3A-222	ENST00000630907	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	31.54	■■■□□ 2.64
UBE3A-222	ENST00000630907	PGAP2	Q9UHJ9	254 aa		31.54	■■■□□ 2.64
UBE3A-222	ENST00000630907	MROH7-TTC4	A0A0A0MT08	1334 aa		31.53	■■■□□ 2.64
UBE3A-222	ENST00000630907	TOMM70	O94826	608 aa		31.53	■■■□□ 2.64
UBE3A-222	ENST00000630907	KBTBD3	Q8NAB2	608 aa		31.53	■■■□□ 2.64
UBE3A-222	ENST00000630907	ASTN2	O75129	1339 aa	Predicted RBP	31.52	■■■□□ 2.64
UBE3A-222	ENST00000630907	CYP7A1	P22680	504 aa		31.52	■■■□□ 2.64
UBE3A-222	ENST00000630907	SLC9C2	Q5TAH2	1124 aa		31.52	■■■□□ 2.64
UBE3A-222	ENST00000630907	ANGEL2	Q5VTE6	544 aa	Known RBP	31.52	■■■□□ 2.64
UBE3A-222	ENST00000630907	CHADL	Q6NUI6	762 aa		31.52	■■■□□ 2.64
UBE3A-222	ENST00000630907	PDE6A	P16499	860 aa		31.51	■■■□□ 2.63
UBE3A-222	ENST00000630907	ZSCAN25	Q6NSZ9	544 aa		31.51	■■■□□ 2.63
UBE3A-222	ENST00000630907	EVI5L	Q96CN4	794 aa		31.51	■■■□□ 2.63
UBE3A-222	ENST00000630907	GGA3	Q9NZ52	723 aa		31.51	■■■□□ 2.63
UBE3A-222	ENST00000630907	DOCK2	Q92608	1830 aa		31.51	■■■□□ 2.63
UBE3A-222	ENST00000630907	ADAMTSL1	Q8N6G6	1762 aa		31.51	■■■□□ 2.63
UBE3A-222	ENST00000630907	MYO5A	Q9Y4I1	1855 aa	Known RBP	31.5	■■■□□ 2.63
UBE3A-222	ENST00000630907	RBM46	Q8TBY0	533 aa	Known RBP	31.5	■■■□□ 2.63
UBE3A-222	ENST00000630907	DCPS	Q96C86	337 aa	Known RBP	31.5	■■■□□ 2.63
UBE3A-222	ENST00000630907	TDRD3	Q9H7E2	651 aa	Known RBP	31.5	■■■□□ 2.63
UBE3A-222	ENST00000630907	MAST2	Q6P0Q8	1798 aa		31.49	■■■□□ 2.63
UBE3A-222	ENST00000630907	GPR75-ASB3	A0A0A6YYF3	556 aa		31.49	■■■□□ 2.63
UBE3A-222	ENST00000630907	CLRN2	A0PK11	232 aa		31.49	■■■□□ 2.63
UBE3A-222	ENST00000630907	BTD	P43251	543 aa		31.49	■■■□□ 2.63
UBE3A-222	ENST00000630907	ZNF70	Q9UC06	446 aa	Predicted RBP	31.49	■■■□□ 2.63
UBE3A-222	ENST00000630907	MYH2	Q9UKX2	1941 aa		31.49	■■■□□ 2.63
UBE3A-222	ENST00000630907	TRIM6-TRIM34	B2RNG4	842 aa		31.48	■■■□□ 2.63
UBE3A-222	ENST00000630907	ADD2	P35612	726 aa		31.48	■■■□□ 2.63
UBE3A-222	ENST00000630907	SPDYE2	Q495Y8	402 aa		31.48	■■■□□ 2.63
UBE3A-222	ENST00000630907	MAP1S	Q66K74	1059 aa	Predicted RBP	31.48	■■■□□ 2.63
UBE3A-222	ENST00000630907	ADGRA1	Q86SQ6	560 aa		31.48	■■■□□ 2.63
UBE3A-222	ENST00000630907	SKAP1	Q86WV1	359 aa		31.48	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms