RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 CCNT1O60563 726 aaKnown RBP13.24□□□□□ -0.29
SHPRH-211ENST00000629427 ATP2A2P16615 1042 aaKnown RBP13.24□□□□□ -0.29
SHPRH-211ENST00000629427 HSPA4P34932 840 aa13.24□□□□□ -0.29
SHPRH-211ENST00000629427 WDR44Q5JSH3 913 aa13.24□□□□□ -0.29
SHPRH-211ENST00000629427 ZBTB9Q96C00 473 aa13.24□□□□□ -0.29
SHPRH-211ENST00000629427 CFAP57Q96MR6 1250 aa13.24□□□□□ -0.29
SHPRH-211ENST00000629427 SH2D4AQ9H788 454 aa13.24□□□□□ -0.29
SHPRH-211ENST00000629427 ARHGEF10LQ9HCE6 1279 aa13.24□□□□□ -0.29
SHPRH-211ENST00000629427 LMTK3Q96Q04 1460 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 EIF4G3O43432 1585 aaKnown RBP13.23□□□□□ -0.29
SHPRH-211ENST00000629427 CHMP2AO43633 222 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 RASA3Q14644 834 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 EIF6P56537 245 aaKnown RBP13.23□□□□□ -0.29
SHPRH-211ENST00000629427 ZYXQ15942 572 aaKnown RBP13.23□□□□□ -0.29
SHPRH-211ENST00000629427 BTG4Q9NY30 223 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 NOP56O00567 594 aaKnown RBP13.23□□□□□ -0.29
SHPRH-211ENST00000629427 EPB41P11171 864 aaKnown RBP13.23□□□□□ -0.29
SHPRH-211ENST00000629427 LETM2Q2VYF4 491 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 RAPGEF6Q8TEU7 1601 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 SLC8A3P57103 927 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 BIRC3Q13489 604 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 HDAC1Q13547 482 aaPredicted RBP13.23□□□□□ -0.29
SHPRH-211ENST00000629427 CCDC129Q6ZRS4 1044 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 FCHSD1Q86WN1 690 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 CNBD1Q8NA66 436 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 GINS2Q9Y248 185 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 CTTNBP2Q8WZ74 1663 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 PLCH2O75038 1416 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 CCDC160A6NGH7 325 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 UFL1O94874 794 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 CREB3L3Q68CJ9 461 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 MRPL50Q8N5N7 158 aaKnown RBP13.23□□□□□ -0.29
SHPRH-211ENST00000629427 ANKRD44Q8N8A2 993 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 GUCA1BQ9UMX6 200 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 VWA3AA6NCI4 1184 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 KIAA1524Q8TCG1 905 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 ARHGAP45Q92619 1136 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 SMC6Q96SB8 1091 aa13.23□□□□□ -0.29
SHPRH-211ENST00000629427 STX10O60499 249 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 ATRIPQ8WXE1 791 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 PPP1R9BQ96SB3 815 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 DENND2AQ9ULE3 1009 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 THOC2Q8NI27 1593 aaKnown RBP13.22□□□□□ -0.29
SHPRH-211ENST00000629427 GEN1Q17RS7 908 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 IPO4Q8TEX9 1081 aaKnown RBP13.22□□□□□ -0.29
SHPRH-211ENST00000629427 IFT81Q8WYA0 676 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 TTC6Q86TZ1 520 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 OPA1O60313 960 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 MTHFSDQ2M296 383 aaKnown RBP13.22□□□□□ -0.29
SHPRH-211ENST00000629427 SV2BQ7L1I2 683 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 KIFAP3Q92845 792 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 ABCA10Q8WWZ4 1543 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 PCDH11XQ9BZA7 1347 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 PCDH11YQ9BZA8 1340 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 NCKAP5LQ9HCH0 1330 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 F13A1P00488 732 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 RPL13P26373 211 aaKnown RBP13.22□□□□□ -0.29
SHPRH-211ENST00000629427 SMTNP53814 917 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 CFAP157Q5JU67 520 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 ANAPC4Q9UJX5 808 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 RIMS2Q9UQ26 1411 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 MAP3K5Q99683 1374 aa13.22□□□□□ -0.29
SHPRH-211ENST00000629427 E7EVH7 732 aa13.21□□□□□ -0.29
SHPRH-211ENST00000629427 KARSQ15046 597 aaKnown RBP13.21□□□□□ -0.29
SHPRH-211ENST00000629427 KLHL40Q2TBA0 621 aa13.21□□□□□ -0.29
SHPRH-211ENST00000629427 KCNK9Q9NPC2 374 aa13.21□□□□□ -0.29
SHPRH-211ENST00000629427 ZRANB1Q9UGI0 708 aa13.21□□□□□ -0.29
SHPRH-211ENST00000629427 TPD52P55327 224 aaPredicted RBP13.21□□□□□ -0.29
SHPRH-211ENST00000629427 MYCLP12524 364 aaPredicted RBP13.21□□□□□ -0.29
SHPRH-211ENST00000629427 ZNF174Q15697 407 aa13.21□□□□□ -0.29
SHPRH-211ENST00000629427 CCT6BQ92526 530 aa13.21□□□□□ -0.29
SHPRH-211ENST00000629427 CRCPO75575 148 aa13.21□□□□□ -0.29
SHPRH-211ENST00000629427 UAP1Q16222 522 aaPredicted RBP13.21□□□□□ -0.29
SHPRH-211ENST00000629427 BRDTQ58F21 947 aaPredicted RBP13.21□□□□□ -0.29
SHPRH-211ENST00000629427 MAEAQ7L5Y9 396 aa13.21□□□□□ -0.29
SHPRH-211ENST00000629427 GPATCH11Q8N954 259 aa13.21□□□□□ -0.29
SHPRH-211ENST00000629427 JAKMIP2Q96AA8 810 aa13.21□□□□□ -0.29
SHPRH-211ENST00000629427 PTPDC1A2A3K4 754 aa13.21□□□□□ -0.3
SHPRH-211ENST00000629427 DAPK3O43293 454 aa13.21□□□□□ -0.3
SHPRH-211ENST00000629427 CCT6AP40227 531 aaKnown RBP13.21□□□□□ -0.3
SHPRH-211ENST00000629427 RUFY3Q7L099 469 aa13.21□□□□□ -0.3
SHPRH-211ENST00000629427 IFT74Q96LB3 600 aa13.21□□□□□ -0.3
SHPRH-211ENST00000629427 TSGA10Q9BZW7 698 aa13.21□□□□□ -0.3
SHPRH-211ENST00000629427 STRN3Q13033 797 aa13.21□□□□□ -0.3
SHPRH-211ENST00000629427 IVNS1ABPQ9Y6Y0 642 aa13.21□□□□□ -0.3
SHPRH-211ENST00000629427 TTC41PQ6P2S7 1318 aa13.21□□□□□ -0.3
SHPRH-211ENST00000629427 MBD4O95243 580 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 RFX1P22670 979 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 LINS1Q8NG48 757 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 GOLGA1Q92805 767 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 TRIM7Q9C029 511 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 LZTFL1Q9NQ48 299 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 CCDC186Q7Z3E2 898 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 PKNOX2Q96KN3 472 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 BEGAINQ9BUH8 593 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 STK32BQ9NY57 414 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 TEX14Q8IWB6 1497 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 AK2P54819 239 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 DHX32Q7L7V1 743 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms