RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.98■□□□□ 0.31
SOX2-OT-241ENST00000626948 TNNQ9UQP3 1299 aa16.98■□□□□ 0.31
SOX2-OT-241ENST00000626948 GPR25O00155 361 aa16.97■□□□□ 0.31
SOX2-OT-241ENST00000626948 MYO1BO43795 1136 aa16.97■□□□□ 0.31
SOX2-OT-241ENST00000626948 RARSP54136 660 aaKnown RBP16.97■□□□□ 0.31
SOX2-OT-241ENST00000626948 CACNB3P54284 484 aa16.97■□□□□ 0.31
SOX2-OT-241ENST00000626948 CTU1Q7Z7A3 348 aaKnown RBP16.97■□□□□ 0.31
SOX2-OT-241ENST00000626948 MYH13Q9UKX3 1938 aa16.96■□□□□ 0.31
SOX2-OT-241ENST00000626948 TCP10L2B9ZVM9 353 aa16.96■□□□□ 0.31
SOX2-OT-241ENST00000626948 PUM3Q15397 648 aaKnown RBP16.96■□□□□ 0.31
SOX2-OT-241ENST00000626948 APOBEC3HQ6NTF7 200 aaKnown RBP16.96■□□□□ 0.31
SOX2-OT-241ENST00000626948 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.96■□□□□ 0.31
SOX2-OT-241ENST00000626948 CNKSR2Q8WXI2 1034 aa16.96■□□□□ 0.31
SOX2-OT-241ENST00000626948 SLC10A4Q96EP9 437 aa16.96■□□□□ 0.31
SOX2-OT-241ENST00000626948 MEIS3Q99687 375 aa16.96■□□□□ 0.31
SOX2-OT-241ENST00000626948 PTPN18Q99952 460 aa16.96■□□□□ 0.31
SOX2-OT-241ENST00000626948 PA2G4Q9UQ80 394 aaKnown RBP16.96■□□□□ 0.31
SOX2-OT-241ENST00000626948 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.96■□□□□ 0.31
SOX2-OT-241ENST00000626948 KIF16BQ96L93 1317 aa16.96■□□□□ 0.3
SOX2-OT-241ENST00000626948 PPP1R12BO60237 982 aaPredicted RBP16.95■□□□□ 0.3
SOX2-OT-241ENST00000626948 CT47B1P0C2W7 299 aaPredicted RBP16.95■□□□□ 0.3
SOX2-OT-241ENST00000626948 CAP1Q01518 475 aa16.95■□□□□ 0.3
SOX2-OT-241ENST00000626948 SUPT20HL1Q3ZLR7 823 aa16.95■□□□□ 0.3
SOX2-OT-241ENST00000626948 IFNL1Q8IU54 200 aa16.95■□□□□ 0.3
SOX2-OT-241ENST00000626948 SIL1Q9H173 461 aa16.95■□□□□ 0.3
SOX2-OT-241ENST00000626948 LRRFIP2Q9Y608 721 aaKnown RBP16.95■□□□□ 0.3
SOX2-OT-241ENST00000626948 BRCA2P51587 3418 aa16.95■□□□□ 0.3
SOX2-OT-241ENST00000626948 ZBTB48P10074 688 aaPredicted RBP16.94■□□□□ 0.3
SOX2-OT-241ENST00000626948 HDLBPQ00341 1268 aaKnown RBP16.94■□□□□ 0.3
SOX2-OT-241ENST00000626948 SREBF2Q12772 1141 aa16.94■□□□□ 0.3
SOX2-OT-241ENST00000626948 CAVIN4Q5BKX8 364 aa16.94■□□□□ 0.3
SOX2-OT-241ENST00000626948 NOM1Q5C9Z4 860 aaKnown RBP16.94■□□□□ 0.3
SOX2-OT-241ENST00000626948 VPS37DQ86XT2 251 aa16.94■□□□□ 0.3
SOX2-OT-241ENST00000626948 UBTFL1P0CB47 393 aaPredicted RBP16.93■□□□□ 0.3
SOX2-OT-241ENST00000626948 SOX10P56693 466 aa16.93■□□□□ 0.3
SOX2-OT-241ENST00000626948 MLLT1Q03111 559 aaPredicted RBP16.93■□□□□ 0.3
SOX2-OT-241ENST00000626948 LPIN2Q92539 896 aa16.93■□□□□ 0.3
SOX2-OT-241ENST00000626948 MS4A4AQ96JQ5 239 aa16.93■□□□□ 0.3
SOX2-OT-241ENST00000626948 ZDHHC15Q96MV8 337 aa16.93■□□□□ 0.3
SOX2-OT-241ENST00000626948 HPS5Q9UPZ3 1129 aa16.93■□□□□ 0.3
SOX2-OT-241ENST00000626948 MANSC4A6NHS7 340 aaPredicted RBP16.92■□□□□ 0.3
SOX2-OT-241ENST00000626948 UNCXA6NJT0 531 aa16.92■□□□□ 0.3
SOX2-OT-241ENST00000626948 CIAO1O76071 339 aa16.92■□□□□ 0.3
SOX2-OT-241ENST00000626948 IFIT1P09914 478 aaKnown RBP16.92■□□□□ 0.3
SOX2-OT-241ENST00000626948 ANKRD13AQ8IZ07 590 aa16.92■□□□□ 0.3
SOX2-OT-241ENST00000626948 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.92■□□□□ 0.3
SOX2-OT-241ENST00000626948 TBC1D22AQ8WUA7 517 aa16.92■□□□□ 0.3
SOX2-OT-241ENST00000626948 MRIQ9BWK5 157 aa16.92■□□□□ 0.3
SOX2-OT-241ENST00000626948 ELP3Q9H9T3 547 aa16.92■□□□□ 0.3
SOX2-OT-241ENST00000626948 MKI67P46013 3256 aaKnown RBP16.92■□□□□ 0.3
SOX2-OT-241ENST00000626948 TESPA1A2RU30 521 aaPredicted RBP16.91■□□□□ 0.3
SOX2-OT-241ENST00000626948 FRAT2O75474 233 aaPredicted RBP16.91■□□□□ 0.3
SOX2-OT-241ENST00000626948 PRDX5P30044 214 aa16.91■□□□□ 0.3
SOX2-OT-241ENST00000626948 ADORA1P30542 326 aa16.91■□□□□ 0.3
SOX2-OT-241ENST00000626948 PHKA1P46020 1223 aa16.91■□□□□ 0.3
SOX2-OT-241ENST00000626948 IREB2P48200 963 aaKnown RBP16.91■□□□□ 0.3
SOX2-OT-241ENST00000626948 TNFAIP1Q13829 316 aa16.91■□□□□ 0.3
SOX2-OT-241ENST00000626948 VGLL4Q14135 290 aa16.91■□□□□ 0.3
SOX2-OT-241ENST00000626948 INTS3Q68E01 1043 aaKnown RBP16.91■□□□□ 0.3
SOX2-OT-241ENST00000626948 TEKT1Q969V4 418 aa16.91■□□□□ 0.3
SOX2-OT-241ENST00000626948 API5Q9BZZ5 524 aaKnown RBP16.91■□□□□ 0.3
SOX2-OT-241ENST00000626948 BCAR3O75815 825 aa16.9■□□□□ 0.3
SOX2-OT-241ENST00000626948 SLC5A1P13866 664 aa16.9■□□□□ 0.3
SOX2-OT-241ENST00000626948 DIXDC1Q155Q3 683 aa16.9■□□□□ 0.3
SOX2-OT-241ENST00000626948 HHIPL2Q6UWX4 724 aa16.9■□□□□ 0.3
SOX2-OT-241ENST00000626948 OPTNQ96CV9 577 aa16.9■□□□□ 0.3
SOX2-OT-241ENST00000626948 COPRSQ9NQ92 184 aa16.9■□□□□ 0.3
SOX2-OT-241ENST00000626948 FKTNO75072 461 aa16.89■□□□□ 0.29
SOX2-OT-241ENST00000626948 INHBEP58166 350 aa16.89■□□□□ 0.29
SOX2-OT-241ENST00000626948 ATP2B3Q16720 1220 aa16.89■□□□□ 0.29
SOX2-OT-241ENST00000626948 ARHGAP45Q92619 1136 aa16.89■□□□□ 0.29
SOX2-OT-241ENST00000626948 FBXO3Q9UK99 471 aa16.89■□□□□ 0.29
SOX2-OT-241ENST00000626948 SUGT1Q9Y2Z0 365 aa16.89■□□□□ 0.29
SOX2-OT-241ENST00000626948 DAGLAQ9Y4D2 1042 aa16.89■□□□□ 0.29
SOX2-OT-241ENST00000626948 TRIM27P14373 513 aa16.88■□□□□ 0.29
SOX2-OT-241ENST00000626948 NFIAQ12857 509 aa16.88■□□□□ 0.29
SOX2-OT-241ENST00000626948 CRHR2Q13324 411 aa16.88■□□□□ 0.29
SOX2-OT-241ENST00000626948 BRI3BPQ8WY22 251 aa16.88■□□□□ 0.29
SOX2-OT-241ENST00000626948 SNCAIPQ9Y6H5 919 aa16.88■□□□□ 0.29
SOX2-OT-241ENST00000626948 IL15P40933 162 aaPredicted RBP16.87■□□□□ 0.29
SOX2-OT-241ENST00000626948 TIMM10P62072 90 aa16.87■□□□□ 0.29
SOX2-OT-241ENST00000626948 MAP3K9P80192 1104 aa16.87■□□□□ 0.29
SOX2-OT-241ENST00000626948 MTX1Q13505 466 aa16.87■□□□□ 0.29
SOX2-OT-241ENST00000626948 FKBP1CQ5VVH2 108 aa16.87■□□□□ 0.29
SOX2-OT-241ENST00000626948 CDC42EP5Q6NZY7 148 aa16.87■□□□□ 0.29
SOX2-OT-241ENST00000626948 FAM83AQ86UY5 434 aa16.87■□□□□ 0.29
SOX2-OT-241ENST00000626948 WDR66Q8TBY9 1149 aa16.87■□□□□ 0.29
SOX2-OT-241ENST00000626948 ZKSCAN4Q969J2 545 aaPredicted RBP16.87■□□□□ 0.29
SOX2-OT-241ENST00000626948 CEP126Q9P2H0 1117 aa16.87■□□□□ 0.29
SOX2-OT-241ENST00000626948 ALDH1A1P00352 501 aa16.86■□□□□ 0.29
SOX2-OT-241ENST00000626948 TNNI2P48788 182 aa16.86■□□□□ 0.29
SOX2-OT-241ENST00000626948 CCDC102BQ68D86 513 aa16.86■□□□□ 0.29
SOX2-OT-241ENST00000626948 ZFPM1Q8IX07 1006 aa16.86■□□□□ 0.29
SOX2-OT-241ENST00000626948 FAM198AQ9UFP1 575 aa16.86■□□□□ 0.29
SOX2-OT-241ENST00000626948 SALL1Q9NSC2 1324 aa16.86■□□□□ 0.29
SOX2-OT-241ENST00000626948 ZSWIM8A7E2V4 1837 aa16.86■□□□□ 0.29
SOX2-OT-241ENST00000626948 RPAP1Q9BWH6 1393 aaPredicted RBP16.86■□□□□ 0.29
SOX2-OT-241ENST00000626948 ZBTB22O15209 634 aa16.85■□□□□ 0.29
SOX2-OT-241ENST00000626948 TFCP2Q12800 502 aa16.85■□□□□ 0.29
SOX2-OT-241ENST00000626948 RASGRF1Q13972 1273 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms