RNA–Protein interactions for RNA: ENST00000626926.1

CPSF7-226, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5 BASIC

Gene CPSF7, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-226ENST00000626926 ATG9AQ7Z3C6 839 aa11.02□□□□□ -0.65
CPSF7-226ENST00000626926 CTU1Q7Z7A3 348 aaKnown RBP11.02□□□□□ -0.65
CPSF7-226ENST00000626926 LPIN2Q92539 896 aa11.02□□□□□ -0.65
CPSF7-226ENST00000626926 API5Q9BZZ5 524 aaKnown RBP11.02□□□□□ -0.65
CPSF7-226ENST00000626926 ZNF70Q9UC06 446 aaPredicted RBP11.02□□□□□ -0.65
CPSF7-226ENST00000626926 RBBP6Q7Z6E9 1792 aaKnown RBP11.01□□□□□ -0.65
CPSF7-226ENST00000626926 MANSC4A6NHS7 340 aaPredicted RBP11.01□□□□□ -0.65
CPSF7-226ENST00000626926 ALDH1A1P00352 501 aa11.01□□□□□ -0.65
CPSF7-226ENST00000626926 UBTFL1P0CB47 393 aaPredicted RBP11.01□□□□□ -0.65
CPSF7-226ENST00000626926 RARSP54136 660 aaKnown RBP11.01□□□□□ -0.65
CPSF7-226ENST00000626926 GRIK5Q16478 980 aa11.01□□□□□ -0.65
CPSF7-226ENST00000626926 VPS37DQ86XT2 251 aa11.01□□□□□ -0.65
CPSF7-226ENST00000626926 ZNF296Q8WUU4 475 aaPredicted RBP11.01□□□□□ -0.65
CPSF7-226ENST00000626926 WNK4Q96J92 1243 aa11.01□□□□□ -0.65
CPSF7-226ENST00000626926 CLMNQ96JQ2 1002 aa11.01□□□□□ -0.65
CPSF7-226ENST00000626926 ZDHHC15Q96MV8 337 aa11.01□□□□□ -0.65
CPSF7-226ENST00000626926 VEZTQ9HBM0 779 aa11.01□□□□□ -0.65
CPSF7-226ENST00000626926 HDAC5Q9UQL6 1122 aa11.01□□□□□ -0.65
CPSF7-226ENST00000626926 MAST3O60307 1309 aa11.01□□□□□ -0.65
CPSF7-226ENST00000626926 TESPA1A2RU30 521 aaPredicted RBP11□□□□□ -0.65
CPSF7-226ENST00000626926 CCDC85CA6NKD9 419 aa11□□□□□ -0.65
CPSF7-226ENST00000626926 GPR25O00155 361 aa11□□□□□ -0.65
CPSF7-226ENST00000626926 USP2O75604 605 aaPredicted RBP11□□□□□ -0.65
CPSF7-226ENST00000626926 IFIT1P09914 478 aaKnown RBP11□□□□□ -0.65
CPSF7-226ENST00000626926 IREB2P48200 963 aaKnown RBP11□□□□□ -0.65
CPSF7-226ENST00000626926 BCAMP50895 628 aa11□□□□□ -0.65
CPSF7-226ENST00000626926 RBM5P52756 815 aaKnown RBP eCLIP11□□□□□ -0.65
CPSF7-226ENST00000626926 MTX1Q13505 466 aa11□□□□□ -0.65
CPSF7-226ENST00000626926 PKN2Q16513 984 aaKnown RBP11□□□□□ -0.65
CPSF7-226ENST00000626926 INTS3Q68E01 1043 aaKnown RBP11□□□□□ -0.65
CPSF7-226ENST00000626926 HHIPL2Q6UWX4 724 aa11□□□□□ -0.65
CPSF7-226ENST00000626926 FAM83AQ86UY5 434 aa11□□□□□ -0.65
CPSF7-226ENST00000626926 ANKRD13AQ8IZ07 590 aa11□□□□□ -0.65
CPSF7-226ENST00000626926 TEKT1Q969V4 418 aa11□□□□□ -0.65
CPSF7-226ENST00000626926 TDRD3Q9H7E2 651 aaKnown RBP11□□□□□ -0.65
CPSF7-226ENST00000626926 COPRSQ9NQ92 184 aa11□□□□□ -0.65
CPSF7-226ENST00000626926 NOB1Q9ULX3 412 aaKnown RBP11□□□□□ -0.65
CPSF7-226ENST00000626926 FZD1Q9UP38 647 aa11□□□□□ -0.65
CPSF7-226ENST00000626926 SALL1Q9NSC2 1324 aa11□□□□□ -0.65
CPSF7-226ENST00000626926 SLC5A1P13866 664 aa10.99□□□□□ -0.65
CPSF7-226ENST00000626926 PRKG1Q13976 671 aa10.99□□□□□ -0.65
CPSF7-226ENST00000626926 APOBEC3HQ6NTF7 200 aaKnown RBP10.99□□□□□ -0.65
CPSF7-226ENST00000626926 IFNL1Q8IU54 200 aa10.99□□□□□ -0.65
CPSF7-226ENST00000626926 CDAN1Q8IWY9 1227 aa10.99□□□□□ -0.65
CPSF7-226ENST00000626926 WDR66Q8TBY9 1149 aa10.99□□□□□ -0.65
CPSF7-226ENST00000626926 SLC10A4Q96EP9 437 aa10.99□□□□□ -0.65
CPSF7-226ENST00000626926 IQSEC3Q9UPP2 1182 aaPredicted RBP10.99□□□□□ -0.65
CPSF7-226ENST00000626926 DOCK2Q92608 1830 aa10.99□□□□□ -0.65
CPSF7-226ENST00000626926 PDS5AQ29RF7 1337 aaKnown RBP10.99□□□□□ -0.65
CPSF7-226ENST00000626926 MYH2Q9UKX2 1941 aa10.98□□□□□ -0.65
CPSF7-226ENST00000626926 IGF2BP3O00425 579 aaKnown RBP eCLIP10.98□□□□□ -0.65
CPSF7-226ENST00000626926 SEMA3EO15041 775 aa10.98□□□□□ -0.65
CPSF7-226ENST00000626926 TBC1D8O95759 1140 aa10.98□□□□□ -0.65
CPSF7-226ENST00000626926 GJA5P36382 358 aa10.98□□□□□ -0.65
CPSF7-226ENST00000626926 IL15P40933 162 aaPredicted RBP10.98□□□□□ -0.65
CPSF7-226ENST00000626926 TNNI2P48788 182 aa10.98□□□□□ -0.65
CPSF7-226ENST00000626926 MLLT1Q03111 559 aaPredicted RBP10.98□□□□□ -0.65
CPSF7-226ENST00000626926 MKRN3Q13064 507 aaKnown RBP10.98□□□□□ -0.65
CPSF7-226ENST00000626926 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.98□□□□□ -0.65
CPSF7-226ENST00000626926 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.98□□□□□ -0.65
CPSF7-226ENST00000626926 MEIS3Q99687 375 aa10.98□□□□□ -0.65
CPSF7-226ENST00000626926 LRRFIP2Q9Y608 721 aaKnown RBP10.98□□□□□ -0.65
CPSF7-226ENST00000626926 CHAF1AQ13111 956 aaPredicted RBP10.97□□□□□ -0.65
CPSF7-226ENST00000626926 ATP2B3Q16720 1220 aa10.97□□□□□ -0.65
CPSF7-226ENST00000626926 MS4A4AQ96JQ5 239 aa10.97□□□□□ -0.65
CPSF7-226ENST00000626926 TMEM39BQ9GZU3 492 aa10.97□□□□□ -0.65
CPSF7-226ENST00000626926 R3HDMLQ9H3Y0 253 aa10.97□□□□□ -0.65
CPSF7-226ENST00000626926 RFX7Q2KHR2 1363 aa10.97□□□□□ -0.65
CPSF7-226ENST00000626926 SPDYE5A6NIY4 337 aa10.96□□□□□ -0.65
CPSF7-226ENST00000626926 TCP10L2B9ZVM9 353 aa10.96□□□□□ -0.65
CPSF7-226ENST00000626926 FKTNO75072 461 aa10.96□□□□□ -0.65
CPSF7-226ENST00000626926 FRAT2O75474 233 aaPredicted RBP10.96□□□□□ -0.65
CPSF7-226ENST00000626926 GNAI3P08754 354 aa10.96□□□□□ -0.65
CPSF7-226ENST00000626926 TRIM27P14373 513 aa10.96□□□□□ -0.65
CPSF7-226ENST00000626926 VGLL4Q14135 290 aa10.96□□□□□ -0.65
CPSF7-226ENST00000626926 FBXO46Q6PJ61 603 aaPredicted RBP10.96□□□□□ -0.65
CPSF7-226ENST00000626926 OPTNQ96CV9 577 aa10.96□□□□□ -0.65
CPSF7-226ENST00000626926 HOOK2Q96ED9 719 aa10.96□□□□□ -0.65
CPSF7-226ENST00000626926 CEP126Q9P2H0 1117 aa10.96□□□□□ -0.65
CPSF7-226ENST00000626926 HPS5Q9UPZ3 1129 aa10.96□□□□□ -0.65
CPSF7-226ENST00000626926 CENPFP49454 3210 aa10.96□□□□□ -0.66
CPSF7-226ENST00000626926 MAST2Q6P0Q8 1798 aa10.95□□□□□ -0.66
CPSF7-226ENST00000626926 ATRNL1Q5VV63 1379 aa10.95□□□□□ -0.66
CPSF7-226ENST00000626926 GAKO14976 1311 aa10.95□□□□□ -0.66
CPSF7-226ENST00000626926 PRDX5P30044 214 aa10.95□□□□□ -0.66
CPSF7-226ENST00000626926 MAP3K9P80192 1104 aa10.95□□□□□ -0.66
CPSF7-226ENST00000626926 ATF7IPQ6VMQ6 1270 aa10.95□□□□□ -0.66
CPSF7-226ENST00000626926 PTPN18Q99952 460 aa10.95□□□□□ -0.66
CPSF7-226ENST00000626926 SIL1Q9H173 461 aa10.95□□□□□ -0.66
CPSF7-226ENST00000626926 ZCCHC17Q9NP64 241 aaKnown RBP10.95□□□□□ -0.66
CPSF7-226ENST00000626926 TMOD2Q9NZR1 351 aa10.95□□□□□ -0.66
CPSF7-226ENST00000626926 DENND2AQ9ULE3 1009 aa10.95□□□□□ -0.66
CPSF7-226ENST00000626926 DAGLAQ9Y4D2 1042 aa10.95□□□□□ -0.66
CPSF7-226ENST00000626926 PTPRFP10586 1907 aa10.95□□□□□ -0.66
CPSF7-226ENST00000626926 IPO8O15397 1037 aaKnown RBP10.94□□□□□ -0.66
CPSF7-226ENST00000626926 PHKA1P46020 1223 aa10.94□□□□□ -0.66
CPSF7-226ENST00000626926 CACNB3P54284 484 aa10.94□□□□□ -0.66
CPSF7-226ENST00000626926 CRHR2Q13324 411 aa10.94□□□□□ -0.66
CPSF7-226ENST00000626926 OTUD7BQ6GQQ9 843 aa10.94□□□□□ -0.66
CPSF7-226ENST00000626926 ELP3Q9H9T3 547 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms