RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 CLRN2A0PK11 232 aa24.74■■□□□ 1.55
R3HCC1-210ENST00000625275 TRPA1O75762 1119 aa24.74■■□□□ 1.55
R3HCC1-210ENST00000625275 RBM5P52756 815 aaKnown RBP eCLIP24.74■■□□□ 1.55
R3HCC1-210ENST00000625275 FBXO33Q7Z6M2 555 aa24.74■■□□□ 1.55
R3HCC1-210ENST00000625275 PRMT6Q96LA8 375 aaPredicted RBP24.74■■□□□ 1.55
R3HCC1-210ENST00000625275 PRKG1Q13976 671 aa24.73■■□□□ 1.55
R3HCC1-210ENST00000625275 TTF2Q9UNY4 1162 aaKnown RBP24.73■■□□□ 1.55
R3HCC1-210ENST00000625275 AOX1Q06278 1338 aa24.73■■□□□ 1.55
R3HCC1-210ENST00000625275 RFX5P48382 616 aaPredicted RBP24.72■■□□□ 1.55
R3HCC1-210ENST00000625275 CAVIN4Q5BKX8 364 aa24.72■■□□□ 1.55
R3HCC1-210ENST00000625275 VEZTQ9HBM0 779 aa24.72■■□□□ 1.55
R3HCC1-210ENST00000625275 SERPINA10Q9UK55 444 aa24.71■■□□□ 1.55
R3HCC1-210ENST00000625275 ANGEL1Q9UNK9 670 aaKnown RBP24.71■■□□□ 1.55
R3HCC1-210ENST00000625275 IQSEC3Q9UPP2 1182 aaPredicted RBP24.71■■□□□ 1.55
R3HCC1-210ENST00000625275 EYA2O00167 538 aa24.7■■□□□ 1.55
R3HCC1-210ENST00000625275 PTPN12Q05209 780 aaKnown RBP24.7■■□□□ 1.55
R3HCC1-210ENST00000625275 PUM3Q15397 648 aaKnown RBP24.7■■□□□ 1.55
R3HCC1-210ENST00000625275 NEFLP07196 543 aa24.7■■□□□ 1.54
R3HCC1-210ENST00000625275 MTX1Q13505 466 aa24.7■■□□□ 1.54
R3HCC1-210ENST00000625275 LDLRAD1Q5T700 205 aa24.7■■□□□ 1.54
R3HCC1-210ENST00000625275 MCOLN1Q9GZU1 580 aa24.7■■□□□ 1.54
R3HCC1-210ENST00000625275 FRAT2O75474 233 aaPredicted RBP24.69■■□□□ 1.54
R3HCC1-210ENST00000625275 IFIT1P09914 478 aaKnown RBP24.69■■□□□ 1.54
R3HCC1-210ENST00000625275 FGFR2P21802 821 aa24.69■■□□□ 1.54
R3HCC1-210ENST00000625275 CHAF1AQ13111 956 aaPredicted RBP24.69■■□□□ 1.54
R3HCC1-210ENST00000625275 SPDYE2Q495Y8 402 aa24.69■■□□□ 1.54
R3HCC1-210ENST00000625275 CEP85Q6P2H3 762 aa24.69■■□□□ 1.54
R3HCC1-210ENST00000625275 TBC1D22AQ8WUA7 517 aa24.69■■□□□ 1.54
R3HCC1-210ENST00000625275 DGKZQ13574 1117 aa24.68■■□□□ 1.54
R3HCC1-210ENST00000625275 FZD1Q9UP38 647 aa24.68■■□□□ 1.54
R3HCC1-210ENST00000625275 PNMA6EA0A0J9YXQ4 647 aa24.67■■□□□ 1.54
R3HCC1-210ENST00000625275 PPP1R12BO60237 982 aaPredicted RBP24.67■■□□□ 1.54
R3HCC1-210ENST00000625275 BCAMP50895 628 aa24.67■■□□□ 1.54
R3HCC1-210ENST00000625275 AAMPQ13685 434 aa24.67■■□□□ 1.54
R3HCC1-210ENST00000625275 TNFAIP1Q13829 316 aa24.67■■□□□ 1.54
R3HCC1-210ENST00000625275 MAP3K11Q16584 847 aa24.67■■□□□ 1.54
R3HCC1-210ENST00000625275 SUPT20HL1Q3ZLR7 823 aa24.67■■□□□ 1.54
R3HCC1-210ENST00000625275 ZNF70Q9UC06 446 aaPredicted RBP24.67■■□□□ 1.54
R3HCC1-210ENST00000625275 AK9Q5TCS8 1911 aa24.66■■□□□ 1.54
R3HCC1-210ENST00000625275 SRGAP3O43295 1099 aa24.66■■□□□ 1.54
R3HCC1-210ENST00000625275 SLC5A1P13866 664 aa24.66■■□□□ 1.54
R3HCC1-210ENST00000625275 CRKP46108 304 aa24.66■■□□□ 1.54
R3HCC1-210ENST00000625275 MKRN3Q13064 507 aaKnown RBP24.66■■□□□ 1.54
R3HCC1-210ENST00000625275 RASA3Q14644 834 aa24.66■■□□□ 1.54
R3HCC1-210ENST00000625275 GRIK5Q16478 980 aa24.66■■□□□ 1.54
R3HCC1-210ENST00000625275 FBXO3Q9UK99 471 aa24.66■■□□□ 1.54
R3HCC1-210ENST00000625275 PCDHB15Q9Y5E8 787 aa24.66■■□□□ 1.54
R3HCC1-210ENST00000625275 ATP8B2P98198 1209 aa24.65■■□□□ 1.54
R3HCC1-210ENST00000625275 NBPF12Q5TAG4 269 aaPredicted RBP24.65■■□□□ 1.54
R3HCC1-210ENST00000625275 ATG9AQ7Z3C6 839 aa24.65■■□□□ 1.54
R3HCC1-210ENST00000625275 TDRD3Q9H7E2 651 aaKnown RBP24.65■■□□□ 1.54
R3HCC1-210ENST00000625275 TM4SF4P48230 202 aa24.64■■□□□ 1.54
R3HCC1-210ENST00000625275 HDLBPQ00341 1268 aaKnown RBP24.64■■□□□ 1.54
R3HCC1-210ENST00000625275 SREBF2Q12772 1141 aa24.64■■□□□ 1.54
R3HCC1-210ENST00000625275 SPRYD7Q5W111 196 aa24.64■■□□□ 1.54
R3HCC1-210ENST00000625275 SIRT2Q8IXJ6 389 aa24.64■■□□□ 1.54
R3HCC1-210ENST00000625275 RPAP2Q8IXW5 612 aaPredicted RBP24.64■■□□□ 1.54
R3HCC1-210ENST00000625275 LPIN2Q92539 896 aa24.64■■□□□ 1.54
R3HCC1-210ENST00000625275 SIL1Q9H173 461 aa24.64■■□□□ 1.54
R3HCC1-210ENST00000625275 MYH2Q9UKX2 1941 aa24.64■■□□□ 1.53
R3HCC1-210ENST00000625275 CCDC85CA6NKD9 419 aa24.64■■□□□ 1.53
R3HCC1-210ENST00000625275 CIAO1O76071 339 aa24.64■■□□□ 1.53
R3HCC1-210ENST00000625275 MAST3O60307 1309 aa24.62■■□□□ 1.53
R3HCC1-210ENST00000625275 UNCXA6NJT0 531 aa24.62■■□□□ 1.53
R3HCC1-210ENST00000625275 POLA2Q14181 598 aa24.62■■□□□ 1.53
R3HCC1-210ENST00000625275 SSH3Q8TE77 659 aa24.62■■□□□ 1.53
R3HCC1-210ENST00000625275 TEKT1Q969V4 418 aa24.62■■□□□ 1.53
R3HCC1-210ENST00000625275 SLC10A4Q96EP9 437 aa24.62■■□□□ 1.53
R3HCC1-210ENST00000625275 CLMNQ96JQ2 1002 aa24.62■■□□□ 1.53
R3HCC1-210ENST00000625275 SUGT1Q9Y2Z0 365 aa24.62■■□□□ 1.53
R3HCC1-210ENST00000625275 IREB2P48200 963 aaKnown RBP24.61■■□□□ 1.53
R3HCC1-210ENST00000625275 ATP2B3Q16720 1220 aa24.61■■□□□ 1.53
R3HCC1-210ENST00000625275 TNNI2P48788 182 aa24.6■■□□□ 1.53
R3HCC1-210ENST00000625275 CEP126Q9P2H0 1117 aa24.6■■□□□ 1.53
R3HCC1-210ENST00000625275 TCP10L2B9ZVM9 353 aa24.59■■□□□ 1.53
R3HCC1-210ENST00000625275 ZBTB48P10074 688 aaPredicted RBP24.59■■□□□ 1.53
R3HCC1-210ENST00000625275 WNK4Q96J92 1243 aa24.59■■□□□ 1.53
R3HCC1-210ENST00000625275 TEPSINQ96N21 525 aa24.59■■□□□ 1.53
R3HCC1-210ENST00000625275 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.59■■□□□ 1.53
R3HCC1-210ENST00000625275 MANSC4A6NHS7 340 aaPredicted RBP24.58■■□□□ 1.53
R3HCC1-210ENST00000625275 USP2O75604 605 aaPredicted RBP24.58■■□□□ 1.53
R3HCC1-210ENST00000625275 TBC1D8O95759 1140 aa24.58■■□□□ 1.53
R3HCC1-210ENST00000625275 IL15P40933 162 aaPredicted RBP24.58■■□□□ 1.53
R3HCC1-210ENST00000625275 WDR66Q8TBY9 1149 aa24.58■■□□□ 1.53
R3HCC1-210ENST00000625275 ZDHHC15Q96MV8 337 aa24.58■■□□□ 1.53
R3HCC1-210ENST00000625275 MRIQ9BWK5 157 aa24.58■■□□□ 1.53
R3HCC1-210ENST00000625275 COPRSQ9NQ92 184 aa24.58■■□□□ 1.53
R3HCC1-210ENST00000625275 PA2G4Q9UQ80 394 aaKnown RBP24.58■■□□□ 1.53
R3HCC1-210ENST00000625275 CTU1Q7Z7A3 348 aaKnown RBP24.58■■□□□ 1.52
R3HCC1-210ENST00000625275 CDAN1Q8IWY9 1227 aa24.58■■□□□ 1.52
R3HCC1-210ENST00000625275 ANKRD13AQ8IZ07 590 aa24.58■■□□□ 1.52
R3HCC1-210ENST00000625275 TMEM39BQ9GZU3 492 aa24.58■■□□□ 1.52
R3HCC1-210ENST00000625275 HMMRO75330 724 aa24.57■■□□□ 1.52
R3HCC1-210ENST00000625275 TMOD2Q9NZR1 351 aa24.57■■□□□ 1.52
R3HCC1-210ENST00000625275 NOM1Q5C9Z4 860 aaKnown RBP24.56■■□□□ 1.52
R3HCC1-210ENST00000625275 ZNF296Q8WUU4 475 aaPredicted RBP24.56■■□□□ 1.52
R3HCC1-210ENST00000625275 CFHR5Q9BXR6 569 aa24.56■■□□□ 1.52
R3HCC1-210ENST00000625275 DOCK2Q92608 1830 aa24.55■■□□□ 1.52
R3HCC1-210ENST00000625275 CACNB3P54284 484 aa24.55■■□□□ 1.52
R3HCC1-210ENST00000625275 INHBEP58166 350 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms