RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 HSP90AB4PQ58FF6 505 aa11.78□□□□□ -0.52
LINC01560-202ENST00000624822 STRIP1Q5VSL9 837 aa11.78□□□□□ -0.52
LINC01560-202ENST00000624822 PNMA8AQ86V59 439 aaPredicted RBP11.78□□□□□ -0.52
LINC01560-202ENST00000624822 ERC1Q8IUD2 1116 aa11.78□□□□□ -0.52
LINC01560-202ENST00000624822 AGBL3Q8NEM8 1001 aa11.78□□□□□ -0.52
LINC01560-202ENST00000624822 MXD3Q9BW11 206 aa11.78□□□□□ -0.52
LINC01560-202ENST00000624822 ADARB2Q9NS39 739 aaKnown RBP11.78□□□□□ -0.52
LINC01560-202ENST00000624822 GNL3LQ9NVN8 582 aaKnown RBP11.78□□□□□ -0.52
LINC01560-202ENST00000624822 MYO3BQ8WXR4 1341 aa11.78□□□□□ -0.52
LINC01560-202ENST00000624822 SHTN1A0MZ66 631 aa11.77□□□□□ -0.53
LINC01560-202ENST00000624822 ADORA1P30542 326 aa11.77□□□□□ -0.53
LINC01560-202ENST00000624822 IRX6P78412 446 aaPredicted RBP11.77□□□□□ -0.53
LINC01560-202ENST00000624822 DACT2Q5SW24 774 aa11.77□□□□□ -0.53
LINC01560-202ENST00000624822 RBM26Q5T8P6 1007 aaKnown RBP11.77□□□□□ -0.53
LINC01560-202ENST00000624822 FBXO33Q7Z6M2 555 aa11.77□□□□□ -0.53
LINC01560-202ENST00000624822 SIRT2Q8IXJ6 389 aa11.77□□□□□ -0.53
LINC01560-202ENST00000624822 TDRD7Q8NHU6 1098 aaKnown RBP11.77□□□□□ -0.53
LINC01560-202ENST00000624822 DPF2Q92785 391 aa11.77□□□□□ -0.53
LINC01560-202ENST00000624822 RNF25Q96BH1 459 aaPredicted RBP11.77□□□□□ -0.53
LINC01560-202ENST00000624822 XAGE2Q96GT9 111 aa11.77□□□□□ -0.53
LINC01560-202ENST00000624822 NOP58Q9Y2X3 529 aaKnown RBP11.77□□□□□ -0.53
LINC01560-202ENST00000624822 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.77□□□□□ -0.53
LINC01560-202ENST00000624822 F8W031 263 aaPredicted RBP11.76□□□□□ -0.53
LINC01560-202ENST00000624822 USP17L8P0C7I0 530 aa11.76□□□□□ -0.53
LINC01560-202ENST00000624822 TBC1D10BQ4KMP7 808 aaPredicted RBP11.76□□□□□ -0.53
LINC01560-202ENST00000624822 TNNI3KQ59H18 835 aa11.76□□□□□ -0.53
LINC01560-202ENST00000624822 USP50Q70EL3 339 aaPredicted RBP11.76□□□□□ -0.53
LINC01560-202ENST00000624822 SAMD7Q7Z3H4 446 aa11.76□□□□□ -0.53
LINC01560-202ENST00000624822 KIAA0825Q8IV33 1275 aa11.76□□□□□ -0.53
LINC01560-202ENST00000624822 OGFOD1Q8N543 542 aa11.76□□□□□ -0.53
LINC01560-202ENST00000624822 SMC1BQ8NDV3 1235 aa11.76□□□□□ -0.53
LINC01560-202ENST00000624822 RBM46Q8TBY0 533 aaKnown RBP11.76□□□□□ -0.53
LINC01560-202ENST00000624822 HDAC9Q9UKV0 1011 aa11.76□□□□□ -0.53
LINC01560-202ENST00000624822 FPGT-TNNI3KV9GXZ4 949 aa11.76□□□□□ -0.53
LINC01560-202ENST00000624822 MYO5AQ9Y4I1 1855 aaKnown RBP11.76□□□□□ -0.53
LINC01560-202ENST00000624822 TRPM7Q96QT4 1865 aa11.75□□□□□ -0.53
LINC01560-202ENST00000624822 PHKA1P46020 1223 aa11.75□□□□□ -0.53
LINC01560-202ENST00000624822 KIF4BQ2VIQ3 1234 aa11.75□□□□□ -0.53
LINC01560-202ENST00000624822 MFSD14BQ5SR56 506 aa11.75□□□□□ -0.53
LINC01560-202ENST00000624822 CCDC102BQ68D86 513 aa11.75□□□□□ -0.53
LINC01560-202ENST00000624822 LDHDQ86WU2 507 aa11.75□□□□□ -0.53
LINC01560-202ENST00000624822 EXOC6Q8TAG9 804 aa11.75□□□□□ -0.53
LINC01560-202ENST00000624822 RHPN1Q8TCX5 695 aa11.75□□□□□ -0.53
LINC01560-202ENST00000624822 KIF1BPQ96EK5 621 aa11.75□□□□□ -0.53
LINC01560-202ENST00000624822 IL1RAPL2Q9NP60 686 aa11.75□□□□□ -0.53
LINC01560-202ENST00000624822 GPR108Q9NPR9 543 aa11.75□□□□□ -0.53
LINC01560-202ENST00000624822 MYH2Q9UKX2 1941 aa11.75□□□□□ -0.53
LINC01560-202ENST00000624822 AKAP11Q9UKA4 1901 aa11.74□□□□□ -0.53
LINC01560-202ENST00000624822 RAB11FIP3O75154 756 aa11.74□□□□□ -0.53
LINC01560-202ENST00000624822 C1QTNF8P60827 252 aa11.74□□□□□ -0.53
LINC01560-202ENST00000624822 CCDC158Q5M9N0 1113 aa11.74□□□□□ -0.53
LINC01560-202ENST00000624822 TTC39AQ5SRH9 613 aa11.74□□□□□ -0.53
LINC01560-202ENST00000624822 AACSQ86V21 672 aa11.74□□□□□ -0.53
LINC01560-202ENST00000624822 TRPM4Q8TD43 1214 aa11.74□□□□□ -0.53
LINC01560-202ENST00000624822 CCDC8Q9H0W5 538 aaPredicted RBP11.74□□□□□ -0.53
LINC01560-202ENST00000624822 MYOZ2Q9NPC6 264 aa11.74□□□□□ -0.53
LINC01560-202ENST00000624822 DENND2AQ9ULE3 1009 aa11.74□□□□□ -0.53
LINC01560-202ENST00000624822 PCDHB15Q9Y5E8 787 aa11.74□□□□□ -0.53
LINC01560-202ENST00000624822 FAM205AQ6ZU69 1335 aa11.74□□□□□ -0.53
LINC01560-202ENST00000624822 POTEB3A0JP26 581 aa11.73□□□□□ -0.53
LINC01560-202ENST00000624822 COL1A1P02452 1464 aaPredicted RBP11.73□□□□□ -0.53
LINC01560-202ENST00000624822 RBM5P52756 815 aaKnown RBP eCLIP11.73□□□□□ -0.53
LINC01560-202ENST00000624822 EMP3P54852 163 aa11.73□□□□□ -0.53
LINC01560-202ENST00000624822 FKBP1AP62942 108 aaKnown RBP11.73□□□□□ -0.53
LINC01560-202ENST00000624822 MAP1SQ66K74 1059 aaPredicted RBP11.73□□□□□ -0.53
LINC01560-202ENST00000624822 POTEBQ6S5H4 581 aa11.73□□□□□ -0.53
LINC01560-202ENST00000624822 CLASRPQ8N2M8 674 aaKnown RBP11.73□□□□□ -0.53
LINC01560-202ENST00000624822 CERS5Q8N5B7 392 aa11.73□□□□□ -0.53
LINC01560-202ENST00000624822 TBC1D22AQ8WUA7 517 aa11.73□□□□□ -0.53
LINC01560-202ENST00000624822 GMLQ99445 158 aa11.73□□□□□ -0.53
LINC01560-202ENST00000624822 DBNDD2Q9BQY9 259 aa11.73□□□□□ -0.53
LINC01560-202ENST00000624822 SEMA3EO15041 775 aa11.72□□□□□ -0.53
LINC01560-202ENST00000624822 EGFRP00533 1210 aa11.72□□□□□ -0.53
LINC01560-202ENST00000624822 FSTL1Q12841 308 aa11.72□□□□□ -0.53
LINC01560-202ENST00000624822 AAMPQ13685 434 aa11.72□□□□□ -0.53
LINC01560-202ENST00000624822 WDR66Q8TBY9 1149 aa11.72□□□□□ -0.53
LINC01560-202ENST00000624822 EAF2Q96CJ1 260 aaPredicted RBP11.72□□□□□ -0.53
LINC01560-202ENST00000624822 LRRCC1Q9C099 1032 aa11.72□□□□□ -0.53
LINC01560-202ENST00000624822 TLR7Q9NYK1 1049 aaKnown RBP11.72□□□□□ -0.53
LINC01560-202ENST00000624822 TTF2Q9UNY4 1162 aaKnown RBP11.72□□□□□ -0.53
LINC01560-202ENST00000624822 MAST2Q6P0Q8 1798 aa11.72□□□□□ -0.53
LINC01560-202ENST00000624822 IFIT2P09913 472 aaKnown RBP11.71□□□□□ -0.53
LINC01560-202ENST00000624822 UQCRFS1P1P0C7P4 283 aa11.71□□□□□ -0.53
LINC01560-202ENST00000624822 HIRAP54198 1017 aaPredicted RBP11.71□□□□□ -0.53
LINC01560-202ENST00000624822 ZNF280AP59817 542 aaPredicted RBP11.71□□□□□ -0.53
LINC01560-202ENST00000624822 RASGRF1Q13972 1273 aa11.71□□□□□ -0.53
LINC01560-202ENST00000624822 DCPSQ96C86 337 aaKnown RBP11.71□□□□□ -0.53
LINC01560-202ENST00000624822 ABCF2Q9UG63 623 aa11.71□□□□□ -0.53
LINC01560-202ENST00000624822 DBNLQ9UJU6 430 aaKnown RBP11.71□□□□□ -0.53
LINC01560-202ENST00000624822 AK9Q5TCS8 1911 aa11.7□□□□□ -0.54
LINC01560-202ENST00000624822 MAST3O60307 1309 aa11.7□□□□□ -0.54
LINC01560-202ENST00000624822 RIOK3O14730 519 aaKnown RBP11.7□□□□□ -0.54
LINC01560-202ENST00000624822 SMARCA5O60264 1052 aaPredicted RBP11.7□□□□□ -0.54
LINC01560-202ENST00000624822 CENPBP07199 599 aaPredicted RBP11.7□□□□□ -0.54
LINC01560-202ENST00000624822 ARID4AP29374 1257 aaPredicted RBP11.7□□□□□ -0.54
LINC01560-202ENST00000624822 MMP14P50281 582 aa11.7□□□□□ -0.54
LINC01560-202ENST00000624822 SCARF1Q14162 830 aa11.7□□□□□ -0.54
LINC01560-202ENST00000624822 DLGAP5Q15398 846 aa11.7□□□□□ -0.54
LINC01560-202ENST00000624822 CFAP100Q494V2 611 aa11.7□□□□□ -0.54
LINC01560-202ENST00000624822 CNTROBQ8N137 903 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms