RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 NAA16Q6N069 864 aaPredicted RBP21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 ANO2Q9NQ90 1003 aa21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 MAST3O60307 1309 aa21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 MYH2Q9UKX2 1941 aa21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 USP17L3A6NCW0 530 aa21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 USP17L4A6NCW7 530 aa21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 M0R2C6 588 aa21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 YBX3P16989 372 aaKnown RBP eCLIP21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 CYP7A1P22680 504 aa21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 GRIK5Q16478 980 aa21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 STRIP1Q5VSL9 837 aa21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 CCDC129Q6ZRS4 1044 aa21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 KIAA1211Q6ZU35 1233 aa21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 USP17L1Q7RTZ2 530 aa21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 ZNF589Q86UQ0 364 aaPredicted RBP21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 JDP2Q8WYK2 163 aa21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 NSUN4Q96CB9 384 aaKnown RBP21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 MXD3Q9BW11 206 aa21.42■■□□□ 1.02
PTCHD3-202ENST00000622555 PUS7LQ9H0K6 701 aaKnown RBP21.42■■□□□ 1.02
PTCHD3-202ENST00000622555 ZNRF3Q9ULT6 936 aa21.42■■□□□ 1.02
PTCHD3-202ENST00000622555 CCDC171Q6TFL3 1326 aa21.42■■□□□ 1.02
PTCHD3-202ENST00000622555 IGSF3O75054 1194 aa21.41■■□□□ 1.02
PTCHD3-202ENST00000622555 CERS5Q8N5B7 392 aa21.41■■□□□ 1.02
PTCHD3-202ENST00000622555 ZNF384Q8TF68 577 aa21.41■■□□□ 1.02
PTCHD3-202ENST00000622555 SBF1O95248 1867 aa21.41■■□□□ 1.02
PTCHD3-202ENST00000622555 DACT2Q5SW24 774 aa21.41■■□□□ 1.02
PTCHD3-202ENST00000622555 DICER1Q9UPY3 1922 aaKnown RBP21.4■■□□□ 1.02
PTCHD3-202ENST00000622555 PRELPP51888 382 aa21.4■■□□□ 1.02
PTCHD3-202ENST00000622555 TMED8Q6PL24 325 aaPredicted RBP21.4■■□□□ 1.02
PTCHD3-202ENST00000622555 SUGT1Q9Y2Z0 365 aa21.4■■□□□ 1.02
PTCHD3-202ENST00000622555 RAD17O75943 681 aa21.39■■□□□ 1.01
PTCHD3-202ENST00000622555 FKBP1AP62942 108 aaKnown RBP21.39■■□□□ 1.01
PTCHD3-202ENST00000622555 GSTO1P78417 241 aa21.39■■□□□ 1.01
PTCHD3-202ENST00000622555 ADGRA1Q86SQ6 560 aa21.39■■□□□ 1.01
PTCHD3-202ENST00000622555 AIDAQ96BJ3 306 aa21.39■■□□□ 1.01
PTCHD3-202ENST00000622555 USP26Q9BXU7 913 aa21.39■■□□□ 1.01
PTCHD3-202ENST00000622555 LSG1Q9H089 658 aaKnown RBP21.39■■□□□ 1.01
PTCHD3-202ENST00000622555 F8W031 263 aaPredicted RBP21.38■■□□□ 1.01
PTCHD3-202ENST00000622555 GPAA1O43292 621 aa21.38■■□□□ 1.01
PTCHD3-202ENST00000622555 MIGA1Q8NAN2 632 aa21.38■■□□□ 1.01
PTCHD3-202ENST00000622555 MBD4O95243 580 aa21.38■■□□□ 1.01
PTCHD3-202ENST00000622555 DIXDC1Q155Q3 683 aa21.38■■□□□ 1.01
PTCHD3-202ENST00000622555 PSMD14O00487 310 aa21.37■■□□□ 1.01
PTCHD3-202ENST00000622555 PTH1RQ03431 593 aa21.37■■□□□ 1.01
PTCHD3-202ENST00000622555 GPR162Q16538 588 aa21.37■■□□□ 1.01
PTCHD3-202ENST00000622555 C22orf23Q9BZE7 217 aa21.37■■□□□ 1.01
PTCHD3-202ENST00000622555 TTF2Q9UNY4 1162 aaKnown RBP21.37■■□□□ 1.01
PTCHD3-202ENST00000622555 MAGEB6P1A0A0J9YX57 407 aa21.36■■□□□ 1.01
PTCHD3-202ENST00000622555 LDHCP07864 332 aa21.36■■□□□ 1.01
PTCHD3-202ENST00000622555 LMNB1P20700 586 aa21.36■■□□□ 1.01
PTCHD3-202ENST00000622555 SLF2Q8IX21 1173 aa21.36■■□□□ 1.01
PTCHD3-202ENST00000622555 KIAA0825Q8IV33 1275 aa21.35■■□□□ 1.01
PTCHD3-202ENST00000622555 ARMT1Q9H993 441 aa21.35■■□□□ 1.01
PTCHD3-202ENST00000622555 EPB41L2O43491 1005 aaKnown RBP21.35■■□□□ 1.01
PTCHD3-202ENST00000622555 VIL1P09327 827 aaKnown RBP21.35■■□□□ 1.01
PTCHD3-202ENST00000622555 CXCL9Q07325 125 aa21.35■■□□□ 1.01
PTCHD3-202ENST00000622555 CIAPIN1Q6FI81 312 aa21.35■■□□□ 1.01
PTCHD3-202ENST00000622555 RSBN1LQ6PCB5 846 aaPredicted RBP21.35■■□□□ 1.01
PTCHD3-202ENST00000622555 LCORLQ8N3X6 602 aa21.35■■□□□ 1.01
PTCHD3-202ENST00000622555 TBC1D32Q96NH3 1257 aa21.35■■□□□ 1.01
PTCHD3-202ENST00000622555 STRBPQ96SI9 672 aaKnown RBP21.35■■□□□ 1.01
PTCHD3-202ENST00000622555 MROH7-TTC4A0A0A0MT08 1334 aa21.34■■□□□ 1.01
PTCHD3-202ENST00000622555 MYO3BQ8WXR4 1341 aa21.34■■□□□ 1.01
PTCHD3-202ENST00000622555 SRCAPQ6ZRS2 3230 aa21.34■■□□□ 1.01
PTCHD3-202ENST00000622555 SCNN1DP51172 638 aa21.34■■□□□ 1.01
PTCHD3-202ENST00000622555 VPS53Q5VIR6 699 aa21.34■■□□□ 1.01
PTCHD3-202ENST00000622555 NOL10Q9BSC4 688 aaKnown RBP21.34■■□□□ 1.01
PTCHD3-202ENST00000622555 AATFQ9NY61 560 aaKnown RBP eCLIP21.34■■□□□ 1.01
PTCHD3-202ENST00000622555 ADAMTSL1Q8N6G6 1762 aa21.33■■□□□ 1.01
PTCHD3-202ENST00000622555 HSPD1P10809 573 aaKnown RBP21.33■■□□□ 1.01
PTCHD3-202ENST00000622555 EIF6P56537 245 aaKnown RBP21.33■■□□□ 1.01
PTCHD3-202ENST00000622555 DYNLL1P63167 89 aaKnown RBP21.33■■□□□ 1.01
PTCHD3-202ENST00000622555 MAP4K1Q92918 833 aa21.33■■□□□ 1.01
PTCHD3-202ENST00000622555 RIOK1Q9BRS2 568 aaKnown RBP21.33■■□□□ 1.01
PTCHD3-202ENST00000622555 FZD9O00144 591 aa21.32■■□□□ 1
PTCHD3-202ENST00000622555 MCCP23508 829 aa21.32■■□□□ 1
PTCHD3-202ENST00000622555 TNIP1Q15025 636 aa21.32■■□□□ 1
PTCHD3-202ENST00000622555 DSCC1Q9BVC3 393 aa21.32■■□□□ 1
PTCHD3-202ENST00000622555 TIAM2Q8IVF5 1701 aa21.32■■□□□ 1
PTCHD3-202ENST00000622555 BAG3O95817 575 aa21.32■■□□□ 1
PTCHD3-202ENST00000622555 RBM8AQ9Y5S9 174 aaKnown RBP21.32■■□□□ 1
PTCHD3-202ENST00000622555 GAKO14976 1311 aa21.32■■□□□ 1
PTCHD3-202ENST00000622555 GNAT2P19087 354 aa21.31■■□□□ 1
PTCHD3-202ENST00000622555 RBM25P49756 843 aaKnown RBP21.31■■□□□ 1
PTCHD3-202ENST00000622555 TEKT1Q969V4 418 aa21.31■■□□□ 1
PTCHD3-202ENST00000622555 FAM163AQ96GL9 167 aaPredicted RBP21.31■■□□□ 1
PTCHD3-202ENST00000622555 ZBTB12Q9Y330 459 aaPredicted RBP21.31■■□□□ 1
PTCHD3-202ENST00000622555 DAGLAQ9Y4D2 1042 aa21.31■■□□□ 1
PTCHD3-202ENST00000622555 SLC4A4Q9Y6R1 1079 aa21.31■■□□□ 1
PTCHD3-202ENST00000622555 APPP05067 770 aa21.3■■□□□ 1
PTCHD3-202ENST00000622555 BTDP43251 543 aa21.3■■□□□ 1
PTCHD3-202ENST00000622555 AGBL3Q8NEM8 1001 aa21.3■■□□□ 1
PTCHD3-202ENST00000622555 RNF181Q9P0P0 153 aa21.3■■□□□ 1
PTCHD3-202ENST00000622555 U3KPZ7 1027 aaPredicted RBP21.3■■□□□ 1
PTCHD3-202ENST00000622555 GPR75-ASB3A0A0A6YYF3 556 aa21.29■■□□□ 1
PTCHD3-202ENST00000622555 FOXP2O15409 715 aa21.29■■□□□ 1
PTCHD3-202ENST00000622555 PRKAB2O43741 272 aa21.29■■□□□ 1
PTCHD3-202ENST00000622555 GRIN3BO60391 1043 aa21.29■■□□□ 1
PTCHD3-202ENST00000622555 HSPA4P34932 840 aa21.29■■□□□ 1
PTCHD3-202ENST00000622555 CRKP46108 304 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms