RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 SPRYD7Q5W111 196 aa26.23■■□□□ 1.79
PMPCA-212ENST00000622209 CTU1Q7Z7A3 348 aaKnown RBP26.23■■□□□ 1.79
PMPCA-212ENST00000622209 VPS37DQ86XT2 251 aa26.23■■□□□ 1.79
PMPCA-212ENST00000622209 PPP1R12BO60237 982 aaPredicted RBP26.22■■□□□ 1.79
PMPCA-212ENST00000622209 SREBF2Q12772 1141 aa26.22■■□□□ 1.79
PMPCA-212ENST00000622209 RASA3Q14644 834 aa26.22■■□□□ 1.79
PMPCA-212ENST00000622209 CLMNQ96JQ2 1002 aa26.22■■□□□ 1.79
PMPCA-212ENST00000622209 CHAF1AQ13111 956 aaPredicted RBP26.21■■□□□ 1.79
PMPCA-212ENST00000622209 MTX1Q13505 466 aa26.21■■□□□ 1.79
PMPCA-212ENST00000622209 PDE3AQ14432 1141 aa26.21■■□□□ 1.79
PMPCA-212ENST00000622209 FBXO33Q7Z6M2 555 aa26.21■■□□□ 1.79
PMPCA-212ENST00000622209 ZNF296Q8WUU4 475 aaPredicted RBP26.21■■□□□ 1.79
PMPCA-212ENST00000622209 COL1A1P02452 1464 aaPredicted RBP26.21■■□□□ 1.79
PMPCA-212ENST00000622209 TDRD3Q9H7E2 651 aaKnown RBP26.2■■□□□ 1.78
PMPCA-212ENST00000622209 ZNF70Q9UC06 446 aaPredicted RBP26.2■■□□□ 1.78
PMPCA-212ENST00000622209 SERPINA10Q9UK55 444 aa26.2■■□□□ 1.78
PMPCA-212ENST00000622209 FRAT2O75474 233 aaPredicted RBP26.19■■□□□ 1.78
PMPCA-212ENST00000622209 PDE8BO95263 885 aa26.19■■□□□ 1.78
PMPCA-212ENST00000622209 GRIK5Q16478 980 aa26.19■■□□□ 1.78
PMPCA-212ENST00000622209 MAP3K11Q16584 847 aa26.19■■□□□ 1.78
PMPCA-212ENST00000622209 CAVIN4Q5BKX8 364 aa26.19■■□□□ 1.78
PMPCA-212ENST00000622209 FBXO3Q9UK99 471 aa26.19■■□□□ 1.78
PMPCA-212ENST00000622209 SSC5DA1L4H1 1573 aa26.18■■□□□ 1.78
PMPCA-212ENST00000622209 GPR25O00155 361 aa26.18■■□□□ 1.78
PMPCA-212ENST00000622209 MVPQ14764 893 aaKnown RBP26.18■■□□□ 1.78
PMPCA-212ENST00000622209 VGLL2Q8N8G2 317 aa26.18■■□□□ 1.78
PMPCA-212ENST00000622209 R3HDMLQ9H3Y0 253 aa26.18■■□□□ 1.78
PMPCA-212ENST00000622209 A0A1B0GUL6 1792 aa26.18■■□□□ 1.78
PMPCA-212ENST00000622209 EYA2O00167 538 aa26.17■■□□□ 1.78
PMPCA-212ENST00000622209 SRGAP3O43295 1099 aa26.17■■□□□ 1.78
PMPCA-212ENST00000622209 USP2O75604 605 aaPredicted RBP26.17■■□□□ 1.78
PMPCA-212ENST00000622209 CRKP46108 304 aa26.17■■□□□ 1.78
PMPCA-212ENST00000622209 BCAMP50895 628 aa26.17■■□□□ 1.78
PMPCA-212ENST00000622209 SPDYE2Q495Y8 402 aa26.17■■□□□ 1.78
PMPCA-212ENST00000622209 DDX19BQ9UMR2 479 aa26.17■■□□□ 1.78
PMPCA-212ENST00000622209 AKAP11Q9UKA4 1901 aa26.17■■□□□ 1.78
PMPCA-212ENST00000622209 IREB2P48200 963 aaKnown RBP26.16■■□□□ 1.78
PMPCA-212ENST00000622209 WNK4Q96J92 1243 aa26.16■■□□□ 1.78
PMPCA-212ENST00000622209 CHMP4BQ9H444 224 aaKnown RBP26.16■■□□□ 1.78
PMPCA-212ENST00000622209 COPRSQ9NQ92 184 aa26.16■■□□□ 1.78
PMPCA-212ENST00000622209 MANSC4A6NHS7 340 aaPredicted RBP26.15■■□□□ 1.78
PMPCA-212ENST00000622209 TCP10L2B9ZVM9 353 aa26.15■■□□□ 1.78
PMPCA-212ENST00000622209 CIAO1O76071 339 aa26.15■■□□□ 1.78
PMPCA-212ENST00000622209 SOX10P56693 466 aa26.15■■□□□ 1.78
PMPCA-212ENST00000622209 TNFAIP1Q13829 316 aa26.15■■□□□ 1.78
PMPCA-212ENST00000622209 COG6Q9Y2V7 657 aa26.15■■□□□ 1.78
PMPCA-212ENST00000622209 ZBTB48P10074 688 aaPredicted RBP26.13■■□□□ 1.77
PMPCA-212ENST00000622209 INHBEP58166 350 aa26.13■■□□□ 1.77
PMPCA-212ENST00000622209 CDAN1Q8IWY9 1227 aa26.13■■□□□ 1.77
PMPCA-212ENST00000622209 TBC1D22AQ8WUA7 517 aa26.13■■□□□ 1.77
PMPCA-212ENST00000622209 UNCXA6NJT0 531 aa26.12■■□□□ 1.77
PMPCA-212ENST00000622209 FKTNO75072 461 aa26.12■■□□□ 1.77
PMPCA-212ENST00000622209 IFIT1P09914 478 aaKnown RBP26.12■■□□□ 1.77
PMPCA-212ENST00000622209 ATP8B2P98198 1209 aa26.12■■□□□ 1.77
PMPCA-212ENST00000622209 PUM3Q15397 648 aaKnown RBP26.12■■□□□ 1.77
PMPCA-212ENST00000622209 C20orf194Q5TEA3 1177 aa26.12■■□□□ 1.77
PMPCA-212ENST00000622209 ATG9AQ7Z3C6 839 aa26.12■■□□□ 1.77
PMPCA-212ENST00000622209 IFNL1Q8IU54 200 aa26.12■■□□□ 1.77
PMPCA-212ENST00000622209 TMEM39BQ9GZU3 492 aa26.12■■□□□ 1.77
PMPCA-212ENST00000622209 HPS5Q9UPZ3 1129 aa26.12■■□□□ 1.77
PMPCA-212ENST00000622209 ALDH1A1P00352 501 aa26.11■■□□□ 1.77
PMPCA-212ENST00000622209 FGFR2P21802 821 aa26.11■■□□□ 1.77
PMPCA-212ENST00000622209 GJA5P36382 358 aa26.11■■□□□ 1.77
PMPCA-212ENST00000622209 IL15P40933 162 aaPredicted RBP26.11■■□□□ 1.77
PMPCA-212ENST00000622209 PKN2Q16513 984 aaKnown RBP26.11■■□□□ 1.77
PMPCA-212ENST00000622209 NOM1Q5C9Z4 860 aaKnown RBP26.11■■□□□ 1.77
PMPCA-212ENST00000622209 ANKRD13AQ8IZ07 590 aa26.11■■□□□ 1.77
PMPCA-212ENST00000622209 TEPSINQ96N21 525 aa26.11■■□□□ 1.77
PMPCA-212ENST00000622209 CFHR5Q9BXR6 569 aa26.11■■□□□ 1.77
PMPCA-212ENST00000622209 SIL1Q9H173 461 aa26.11■■□□□ 1.77
PMPCA-212ENST00000622209 PA2G4Q9UQ80 394 aaKnown RBP26.11■■□□□ 1.77
PMPCA-212ENST00000622209 PNMA6EA0A0J9YXQ4 647 aa26.1■■□□□ 1.77
PMPCA-212ENST00000622209 IGF2BP3O00425 579 aaKnown RBP eCLIP26.1■■□□□ 1.77
PMPCA-212ENST00000622209 CACNB3P54284 484 aa26.1■■□□□ 1.77
PMPCA-212ENST00000622209 C1orf115Q9H7X2 142 aa26.1■■□□□ 1.77
PMPCA-212ENST00000622209 ELP3Q9H9T3 547 aa26.1■■□□□ 1.77
PMPCA-212ENST00000622209 TNNI2P48788 182 aa26.09■■□□□ 1.77
PMPCA-212ENST00000622209 RRP1P56182 461 aaKnown RBP26.09■■□□□ 1.77
PMPCA-212ENST00000622209 TEKT1Q969V4 418 aa26.09■■□□□ 1.77
PMPCA-212ENST00000622209 ZBTB40Q9NUA8 1239 aa26.09■■□□□ 1.77
PMPCA-212ENST00000622209 HDLBPQ00341 1268 aaKnown RBP26.08■■□□□ 1.77
PMPCA-212ENST00000622209 POLA2Q14181 598 aa26.08■■□□□ 1.77
PMPCA-212ENST00000622209 SSH3Q8TE77 659 aa26.08■■□□□ 1.77
PMPCA-212ENST00000622209 CEP126Q9P2H0 1117 aa26.08■■□□□ 1.77
PMPCA-212ENST00000622209 SLC5A1P13866 664 aa26.07■■□□□ 1.76
PMPCA-212ENST00000622209 LPIN2Q92539 896 aa26.07■■□□□ 1.76
PMPCA-212ENST00000622209 OPTNQ96CV9 577 aa26.06■■□□□ 1.76
PMPCA-212ENST00000622209 MAP3K9P80192 1104 aa26.05■■□□□ 1.76
PMPCA-212ENST00000622209 CEP85Q6P2H3 762 aa26.05■■□□□ 1.76
PMPCA-212ENST00000622209 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.05■■□□□ 1.76
PMPCA-212ENST00000622209 CNKSR2Q8WXI2 1034 aa26.05■■□□□ 1.76
PMPCA-212ENST00000622209 ZDHHC15Q96MV8 337 aa26.05■■□□□ 1.76
PMPCA-212ENST00000622209 G3BP1Q13283 466 aaKnown RBP eCLIP26.04■■□□□ 1.763e-7■■■■□ 24.4
PMPCA-212ENST00000622209 OTUD7BQ6GQQ9 843 aa26.04■■□□□ 1.76
PMPCA-212ENST00000622209 APOBEC3HQ6NTF7 200 aaKnown RBP26.04■■□□□ 1.76
PMPCA-212ENST00000622209 FBXO46Q6PJ61 603 aaPredicted RBP26.04■■□□□ 1.76
PMPCA-212ENST00000622209 PTPN18Q99952 460 aa26.04■■□□□ 1.76
PMPCA-212ENST00000622209 MRIQ9BWK5 157 aa26.04■■□□□ 1.76
PMPCA-212ENST00000622209 VGLL4Q14135 290 aa26.03■■□□□ 1.76
PMPCA-212ENST00000622209 RPAP2Q8IXW5 612 aaPredicted RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms