RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 NBPF12Q5TAG4 269 aaPredicted RBP20.02■□□□□ 0.79
CD40-207ENST00000620709 SLC10A4Q96EP9 437 aa20.02■□□□□ 0.79
CD40-207ENST00000620709 API5Q9BZZ5 524 aaKnown RBP20.02■□□□□ 0.79
CD40-207ENST00000620709 SIL1Q9H173 461 aa20.02■□□□□ 0.79
CD40-207ENST00000620709 IFIT1P09914 478 aaKnown RBP20.01■□□□□ 0.79
CD40-207ENST00000620709 CRKP46108 304 aa20.01■□□□□ 0.79
CD40-207ENST00000620709 PUM3Q15397 648 aaKnown RBP20.01■□□□□ 0.79
CD40-207ENST00000620709 VGLL2Q8N8G2 317 aa20.01■□□□□ 0.79
CD40-207ENST00000620709 ZNF70Q9UC06 446 aaPredicted RBP20.01■□□□□ 0.79
CD40-207ENST00000620709 SERPINA10Q9UK55 444 aa20.01■□□□□ 0.79
CD40-207ENST00000620709 TCP10L2B9ZVM9 353 aa20■□□□□ 0.79
CD40-207ENST00000620709 EYA2O00167 538 aa20■□□□□ 0.79
CD40-207ENST00000620709 SREBF2Q12772 1141 aa20■□□□□ 0.79
CD40-207ENST00000620709 GRIK5Q16478 980 aa20■□□□□ 0.79
CD40-207ENST00000620709 LDLRAD1Q5T700 205 aa20■□□□□ 0.79
CD40-207ENST00000620709 DZIP1LQ8IYY4 767 aaKnown RBP20■□□□□ 0.79
CD40-207ENST00000620709 RFX5P48382 616 aaPredicted RBP19.99■□□□□ 0.79
CD40-207ENST00000620709 SPDYE2Q495Y8 402 aa19.99■□□□□ 0.79
CD40-207ENST00000620709 ATF7IPQ6VMQ6 1270 aa19.99■□□□□ 0.79
CD40-207ENST00000620709 CLMNQ96JQ2 1002 aa19.99■□□□□ 0.79
CD40-207ENST00000620709 SSC5DA1L4H1 1573 aa19.99■□□□□ 0.79
CD40-207ENST00000620709 SLC5A1P13866 664 aa19.98■□□□□ 0.79
CD40-207ENST00000620709 TNFAIP1Q13829 316 aa19.98■□□□□ 0.79
CD40-207ENST00000620709 SPRYD7Q5W111 196 aa19.98■□□□□ 0.79
CD40-207ENST00000620709 FTSJ3Q8IY81 847 aaKnown RBP19.98■□□□□ 0.79
CD40-207ENST00000620709 TBC1D22AQ8WUA7 517 aa19.98■□□□□ 0.79
CD40-207ENST00000620709 LRRFIP2Q9Y608 721 aaKnown RBP19.98■□□□□ 0.79
CD40-207ENST00000620709 ARAP2Q8WZ64 1704 aa19.98■□□□□ 0.79
CD40-207ENST00000620709 IREB2P48200 963 aaKnown RBP19.97■□□□□ 0.79
CD40-207ENST00000620709 TM4SF4P48230 202 aa19.97■□□□□ 0.79
CD40-207ENST00000620709 PANK1Q8TE04 598 aa19.97■□□□□ 0.79
CD40-207ENST00000620709 TRIM27P14373 513 aa19.97■□□□□ 0.79
CD40-207ENST00000620709 ARHGAP45Q92619 1136 aa19.97■□□□□ 0.79
CD40-207ENST00000620709 USP2O75604 605 aaPredicted RBP19.96■□□□□ 0.79
CD40-207ENST00000620709 FGFR2P21802 821 aa19.96■□□□□ 0.79
CD40-207ENST00000620709 TNNI2P48788 182 aa19.96■□□□□ 0.79
CD40-207ENST00000620709 LPIN2Q92539 896 aa19.96■□□□□ 0.79
CD40-207ENST00000620709 TEKT1Q969V4 418 aa19.96■□□□□ 0.79
CD40-207ENST00000620709 CCDC136Q96JN2 1154 aa19.96■□□□□ 0.79
CD40-207ENST00000620709 CACNB3P54284 484 aa19.95■□□□□ 0.78
CD40-207ENST00000620709 MAP3K11Q16584 847 aa19.95■□□□□ 0.78
CD40-207ENST00000620709 B4GALNT3Q6L9W6 998 aa19.95■□□□□ 0.78
CD40-207ENST00000620709 ATG9AQ7Z3C6 839 aa19.95■□□□□ 0.78
CD40-207ENST00000620709 CTU1Q7Z7A3 348 aaKnown RBP19.95■□□□□ 0.78
CD40-207ENST00000620709 ZNF296Q8WUU4 475 aaPredicted RBP19.95■□□□□ 0.78
CD40-207ENST00000620709 CLUAP1Q96AJ1 413 aa19.95■□□□□ 0.78
CD40-207ENST00000620709 WNK4Q96J92 1243 aa19.95■□□□□ 0.78
CD40-207ENST00000620709 MEIS3Q99687 375 aa19.95■□□□□ 0.78
CD40-207ENST00000620709 CEP126Q9P2H0 1117 aa19.95■□□□□ 0.78
CD40-207ENST00000620709 PA2G4Q9UQ80 394 aaKnown RBP19.95■□□□□ 0.78
CD40-207ENST00000620709 HDAC5Q9UQL6 1122 aa19.95■□□□□ 0.78
CD40-207ENST00000620709 TNNQ9UQP3 1299 aa19.95■□□□□ 0.78
CD40-207ENST00000620709 RLBP1P12271 317 aa19.94■□□□□ 0.78
CD40-207ENST00000620709 ATP2B3Q16720 1220 aa19.94■□□□□ 0.78
CD40-207ENST00000620709 CDAN1Q8IWY9 1227 aa19.94■□□□□ 0.78
CD40-207ENST00000620709 TMEM39BQ9GZU3 492 aa19.94■□□□□ 0.78
CD40-207ENST00000620709 COG6Q9Y2V7 657 aa19.94■□□□□ 0.78
CD40-207ENST00000620709 MANSC4A6NHS7 340 aaPredicted RBP19.93■□□□□ 0.78
CD40-207ENST00000620709 ELP3Q9H9T3 547 aa19.93■□□□□ 0.78
CD40-207ENST00000620709 TMOD2Q9NZR1 351 aa19.93■□□□□ 0.78
CD40-207ENST00000620709 MYH13Q9UKX3 1938 aa19.93■□□□□ 0.78
CD40-207ENST00000620709 GPR25O00155 361 aa19.92■□□□□ 0.78
CD40-207ENST00000620709 ANKRD13AQ8IZ07 590 aa19.92■□□□□ 0.78
CD40-207ENST00000620709 MAST3O60307 1309 aa19.92■□□□□ 0.78
CD40-207ENST00000620709 CIAO1O76071 339 aa19.92■□□□□ 0.78
CD40-207ENST00000620709 ZBTB48P10074 688 aaPredicted RBP19.92■□□□□ 0.78
CD40-207ENST00000620709 HDLBPQ00341 1268 aaKnown RBP19.92■□□□□ 0.78
CD40-207ENST00000620709 AAMPQ13685 434 aa19.92■□□□□ 0.78
CD40-207ENST00000620709 MVPQ14764 893 aaKnown RBP19.92■□□□□ 0.78
CD40-207ENST00000620709 WDR66Q8TBY9 1149 aa19.92■□□□□ 0.78
CD40-207ENST00000620709 GNL3LQ9NVN8 582 aaKnown RBP19.92■□□□□ 0.78
CD40-207ENST00000620709 MLLT1Q03111 559 aaPredicted RBP19.91■□□□□ 0.78
CD40-207ENST00000620709 R3HDMLQ9H3Y0 253 aa19.91■□□□□ 0.78
CD40-207ENST00000620709 IL15P40933 162 aaPredicted RBP19.9■□□□□ 0.78
CD40-207ENST00000620709 INHBEP58166 350 aa19.9■□□□□ 0.78
CD40-207ENST00000620709 IFNL1Q8IU54 200 aa19.9■□□□□ 0.78
CD40-207ENST00000620709 ZDHHC15Q96MV8 337 aa19.9■□□□□ 0.78
CD40-207ENST00000620709 TEPSINQ96N21 525 aa19.9■□□□□ 0.78
CD40-207ENST00000620709 FBXO3Q9UK99 471 aa19.9■□□□□ 0.78
CD40-207ENST00000620709 UNCXA6NJT0 531 aa19.89■□□□□ 0.77
CD40-207ENST00000620709 ALDH1A1P00352 501 aa19.89■□□□□ 0.77
CD40-207ENST00000620709 GNAI3P08754 354 aa19.89■□□□□ 0.77
CD40-207ENST00000620709 GJA5P36382 358 aa19.89■□□□□ 0.77
CD40-207ENST00000620709 INTS3Q68E01 1043 aaKnown RBP19.89■□□□□ 0.77
CD40-207ENST00000620709 OPTNQ96CV9 577 aa19.89■□□□□ 0.77
CD40-207ENST00000620709 SUGT1Q9Y2Z0 365 aa19.89■□□□□ 0.77
CD40-207ENST00000620709 SRGAP3O43295 1099 aa19.88■□□□□ 0.77
CD40-207ENST00000620709 FKTNO75072 461 aa19.88■□□□□ 0.77
CD40-207ENST00000620709 SOX10P56693 466 aa19.88■□□□□ 0.77
CD40-207ENST00000620709 DDX19BQ9UMR2 479 aa19.88■□□□□ 0.77
CD40-207ENST00000620709 OTOFQ9HC10 1997 aa19.88■□□□□ 0.77
CD40-207ENST00000620709 IGF2BP3O00425 579 aaKnown RBP eCLIP19.87■□□□□ 0.77
CD40-207ENST00000620709 PHKA1P46020 1223 aa19.87■□□□□ 0.77
CD40-207ENST00000620709 MAP3K9P80192 1104 aa19.87■□□□□ 0.77
CD40-207ENST00000620709 APOBEC3HQ6NTF7 200 aaKnown RBP19.87■□□□□ 0.77
CD40-207ENST00000620709 ITPRIPQ8IWB1 547 aa19.87■□□□□ 0.77
CD40-207ENST00000620709 TMEM57Q8N5G2 664 aa19.87■□□□□ 0.77
CD40-207ENST00000620709 CSADQ9Y600 493 aa19.87■□□□□ 0.77
CD40-207ENST00000620709 LDHBP07195 334 aaKnown RBP19.86■□□□□ 0.77
CD40-207ENST00000620709 ADORA1P30542 326 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms