RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 TNFAIP1Q13829 316 aa27.71■■■□□ 2.03
SRRT-218ENST00000620394 NBPF12Q5TAG4 269 aaPredicted RBP27.71■■■□□ 2.03
SRRT-218ENST00000620394 PRMT6Q96LA8 375 aaPredicted RBP27.71■■■□□ 2.03
SRRT-218ENST00000620394 USP44Q9H0E7 712 aa27.71■■■□□ 2.03
SRRT-218ENST00000620394 EFCC1Q9HA90 598 aa27.71■■■□□ 2.03
SRRT-218ENST00000620394 KIAA0100Q14667 2235 aaKnown RBP27.71■■■□□ 2.03
SRRT-218ENST00000620394 GJA5P36382 358 aa27.7■■■□□ 2.02
SRRT-218ENST00000620394 TDRD7Q8NHU6 1098 aaKnown RBP27.7■■■□□ 2.02
SRRT-218ENST00000620394 TESPA1A2RU30 521 aaPredicted RBP27.69■■■□□ 2.02
SRRT-218ENST00000620394 SP3Q02447 781 aa27.69■■■□□ 2.02
SRRT-218ENST00000620394 SMC4Q9NTJ3 1288 aa27.69■■■□□ 2.02
SRRT-218ENST00000620394 MKI67P46013 3256 aaKnown RBP27.68■■■□□ 2.02
SRRT-218ENST00000620394 USP2O75604 605 aaPredicted RBP27.68■■■□□ 2.02
SRRT-218ENST00000620394 RBM5P52756 815 aaKnown RBP eCLIP27.68■■■□□ 2.02
SRRT-218ENST00000620394 RASA3Q14644 834 aa27.68■■■□□ 2.02
SRRT-218ENST00000620394 VGLL2Q8N8G2 317 aa27.68■■■□□ 2.02
SRRT-218ENST00000620394 FAM84BQ96KN1 310 aaPredicted RBP27.67■■■□□ 2.02
SRRT-218ENST00000620394 AOX1Q06278 1338 aa27.67■■■□□ 2.02
SRRT-218ENST00000620394 HIBADHP31937 336 aaKnown RBP27.66■■■□□ 2.02
SRRT-218ENST00000620394 GYG1P46976 350 aa27.66■■■□□ 2.02
SRRT-218ENST00000620394 SPDYE2Q495Y8 402 aa27.66■■■□□ 2.02
SRRT-218ENST00000620394 LRRC24Q50LG9 513 aa27.66■■■□□ 2.02
SRRT-218ENST00000620394 PTPN18Q99952 460 aa27.66■■■□□ 2.02
SRRT-218ENST00000620394 CENPFP49454 3210 aa27.65■■■□□ 2.02
SRRT-218ENST00000620394 OPTNQ96CV9 577 aa27.65■■■□□ 2.02
SRRT-218ENST00000620394 JAG2Q9Y219 1238 aa27.65■■■□□ 2.02
SRRT-218ENST00000620394 ELP3Q9H9T3 547 aa27.64■■■□□ 2.02
SRRT-218ENST00000620394 MFSD14BQ5SR56 506 aa27.63■■■□□ 2.01
SRRT-218ENST00000620394 FBXO33Q7Z6M2 555 aa27.63■■■□□ 2.01
SRRT-218ENST00000620394 SERPINA10Q9UK55 444 aa27.63■■■□□ 2.01
SRRT-218ENST00000620394 MYH13Q9UKX3 1938 aa27.63■■■□□ 2.01
SRRT-218ENST00000620394 BRCA2P51587 3418 aa27.63■■■□□ 2.01
SRRT-218ENST00000620394 PDE8BO95263 885 aa27.62■■■□□ 2.01
SRRT-218ENST00000620394 ARHGEF6Q15052 776 aa27.62■■■□□ 2.01
SRRT-218ENST00000620394 METTL24Q5JXM2 366 aa27.62■■■□□ 2.01
SRRT-218ENST00000620394 ZNF333Q96JL9 665 aa27.62■■■□□ 2.01
SRRT-218ENST00000620394 TMEM106CQ9BVX2 250 aa27.62■■■□□ 2.01
SRRT-218ENST00000620394 KIF16BQ96L93 1317 aa27.62■■■□□ 2.01
SRRT-218ENST00000620394 EN2P19622 333 aaPredicted RBP27.61■■■□□ 2.01
SRRT-218ENST00000620394 RFX5P48382 616 aaPredicted RBP27.61■■■□□ 2.01
SRRT-218ENST00000620394 MS4A4AQ96JQ5 239 aa27.61■■■□□ 2.01
SRRT-218ENST00000620394 ZNF70Q9UC06 446 aaPredicted RBP27.61■■■□□ 2.01
SRRT-218ENST00000620394 KLHDC4Q8TBB5 520 aa27.6■■■□□ 2.01
SRRT-218ENST00000620394 TTF2Q9UNY4 1162 aaKnown RBP27.6■■■□□ 2.01
SRRT-218ENST00000620394 GTF2A2P52657 109 aa27.59■■■□□ 2.01
SRRT-218ENST00000620394 CAP1Q01518 475 aa27.59■■■□□ 2.01
SRRT-218ENST00000620394 TAF1CQ15572 869 aaPredicted RBP27.59■■■□□ 2.01
SRRT-218ENST00000620394 SLC9C1Q4G0N8 1177 aa27.59■■■□□ 2.01
SRRT-218ENST00000620394 ZFYVE28Q9HCC9 887 aa27.59■■■□□ 2.01
SRRT-218ENST00000620394 CCL15-CCL14A0A0B4J2E2 113 aa27.58■■■□□ 2.01
SRRT-218ENST00000620394 FGFR2P21802 821 aa27.58■■■□□ 2.01
SRRT-218ENST00000620394 TNNI2P48788 182 aa27.58■■■□□ 2.01
SRRT-218ENST00000620394 VGLL4Q14135 290 aa27.58■■■□□ 2.01
SRRT-218ENST00000620394 CCL15Q16663 113 aa27.58■■■□□ 2.01
SRRT-218ENST00000620394 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.58■■■□□ 2.01
SRRT-218ENST00000620394 NBPF11Q86T75 865 aa27.58■■■□□ 2.01
SRRT-218ENST00000620394 BRI3BPQ8WY22 251 aa27.58■■■□□ 2.01
SRRT-218ENST00000620394 TEPSINQ96N21 525 aa27.58■■■□□ 2.01
SRRT-218ENST00000620394 API5Q9BZZ5 524 aaKnown RBP27.58■■■□□ 2.01
SRRT-218ENST00000620394 TDRD3Q9H7E2 651 aaKnown RBP27.57■■■□□ 2
SRRT-218ENST00000620394 NOB1Q9ULX3 412 aaKnown RBP27.57■■■□□ 2
SRRT-218ENST00000620394 CSADQ9Y600 493 aa27.57■■■□□ 2
SRRT-218ENST00000620394 PTCH2Q9Y6C5 1203 aa27.57■■■□□ 2
SRRT-218ENST00000620394 EYA2O00167 538 aa27.56■■■□□ 2
SRRT-218ENST00000620394 PUM3Q15397 648 aaKnown RBP27.56■■■□□ 2
SRRT-218ENST00000620394 CAVIN4Q5BKX8 364 aa27.56■■■□□ 2
SRRT-218ENST00000620394 VPS37DQ86XT2 251 aa27.56■■■□□ 2
SRRT-218ENST00000620394 DZIP1LQ8IYY4 767 aaKnown RBP27.56■■■□□ 2
SRRT-218ENST00000620394 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.56■■■□□ 2
SRRT-218ENST00000620394 UBTFL1P0CB47 393 aaPredicted RBP27.55■■■□□ 2
SRRT-218ENST00000620394 RARSP54136 660 aaKnown RBP27.55■■■□□ 2
SRRT-218ENST00000620394 CDAN1Q8IWY9 1227 aa27.55■■■□□ 2
SRRT-218ENST00000620394 TBC1D22AQ8WUA7 517 aa27.55■■■□□ 2
SRRT-218ENST00000620394 CNKSR2Q8WXI2 1034 aa27.55■■■□□ 2
SRRT-218ENST00000620394 FBXO3Q9UK99 471 aa27.55■■■□□ 2
SRRT-218ENST00000620394 ZSWIM8A7E2V4 1837 aa27.54■■■□□ 2
SRRT-218ENST00000620394 TCP10L2B9ZVM9 353 aa27.54■■■□□ 2
SRRT-218ENST00000620394 WDHD1O75717 1129 aaPredicted RBP27.54■■■□□ 2
SRRT-218ENST00000620394 CRKP46108 304 aa27.54■■■□□ 2
SRRT-218ENST00000620394 FXR1P51114 621 aaKnown RBP eCLIP27.54■■■□□ 2
SRRT-218ENST00000620394 MAP3K9P80192 1104 aa27.54■■■□□ 2
SRRT-218ENST00000620394 OTUD5Q96G74 571 aa27.54■■■□□ 2
SRRT-218ENST00000620394 TMEM39BQ9GZU3 492 aa27.54■■■□□ 2
SRRT-218ENST00000620394 ATG9AQ7Z3C6 839 aa27.53■■■□□ 2
SRRT-218ENST00000620394 FAM43AQ8N2R8 423 aa27.53■■■□□ 2
SRRT-218ENST00000620394 IQSEC3Q9UPP2 1182 aaPredicted RBP27.53■■■□□ 2
SRRT-218ENST00000620394 SPDYE5A6NIY4 337 aa27.52■■■□□ 2
SRRT-218ENST00000620394 IFIT1P09914 478 aaKnown RBP27.52■■■□□ 2
SRRT-218ENST00000620394 HDLBPQ00341 1268 aaKnown RBP27.52■■■□□ 2
SRRT-218ENST00000620394 GRIK5Q16478 980 aa27.52■■■□□ 2
SRRT-218ENST00000620394 SLC4A8Q2Y0W8 1093 aa27.52■■■□□ 2
SRRT-218ENST00000620394 ARHGAP45Q92619 1136 aa27.52■■■□□ 2
SRRT-218ENST00000620394 ZCCHC17Q9NP64 241 aaKnown RBP27.52■■■□□ 2
SRRT-218ENST00000620394 CIAO1O76071 339 aa27.51■■□□□ 1.99
SRRT-218ENST00000620394 BCAMP50895 628 aa27.51■■□□□ 1.99
SRRT-218ENST00000620394 CHAF1AQ13111 956 aaPredicted RBP27.5■■□□□ 1.99
SRRT-218ENST00000620394 LPIN2Q92539 896 aa27.5■■□□□ 1.99
SRRT-218ENST00000620394 HDAC5Q9UQL6 1122 aa27.5■■□□□ 1.99
SRRT-218ENST00000620394 SUGT1Q9Y2Z0 365 aa27.5■■□□□ 1.99
SRRT-218ENST00000620394 CETPP11597 493 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms