RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 TMEM57Q8N5G2 664 aa27.46■■□□□ 1.99
SYNGR3-206ENST00000618464 TBC1D22AQ8WUA7 517 aa27.46■■□□□ 1.99
SYNGR3-206ENST00000618464 SERPINA10Q9UK55 444 aa27.46■■□□□ 1.99
SYNGR3-206ENST00000618464 COL1A1P02452 1464 aaPredicted RBP27.45■■□□□ 1.99
SYNGR3-206ENST00000618464 SRGAP3O43295 1099 aa27.45■■□□□ 1.98
SYNGR3-206ENST00000618464 IL15P40933 162 aaPredicted RBP27.45■■□□□ 1.98
SYNGR3-206ENST00000618464 CRKP46108 304 aa27.45■■□□□ 1.98
SYNGR3-206ENST00000618464 RGS19P49795 217 aa27.45■■□□□ 1.98
SYNGR3-206ENST00000618464 COPRSQ9NQ92 184 aa27.45■■□□□ 1.98
SYNGR3-206ENST00000618464 FZD1Q9UP38 647 aa27.45■■□□□ 1.98
SYNGR3-206ENST00000618464 DZIP1LQ8IYY4 767 aaKnown RBP27.44■■□□□ 1.98
SYNGR3-206ENST00000618464 TDRD3Q9H7E2 651 aaKnown RBP27.44■■□□□ 1.98
SYNGR3-206ENST00000618464 GNAI2P04899 355 aa27.43■■□□□ 1.98
SYNGR3-206ENST00000618464 ARMC9Q7Z3E5 817 aa27.43■■□□□ 1.98
SYNGR3-206ENST00000618464 ZNF70Q9UC06 446 aaPredicted RBP27.43■■□□□ 1.98
SYNGR3-206ENST00000618464 SPDYE2Q495Y8 402 aa27.42■■□□□ 1.98
SYNGR3-206ENST00000618464 ANGEL1Q9UNK9 670 aaKnown RBP27.42■■□□□ 1.98
SYNGR3-206ENST00000618464 PPP2R3BQ9Y5P8 575 aa27.42■■□□□ 1.98
SYNGR3-206ENST00000618464 MKRN3Q13064 507 aaKnown RBP27.41■■□□□ 1.98
SYNGR3-206ENST00000618464 MTX1Q13505 466 aa27.41■■□□□ 1.98
SYNGR3-206ENST00000618464 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.41■■□□□ 1.98
SYNGR3-206ENST00000618464 MYH13Q9UKX3 1938 aa27.41■■□□□ 1.98
SYNGR3-206ENST00000618464 SSC5DA1L4H1 1573 aa27.4■■□□□ 1.98
SYNGR3-206ENST00000618464 ADORA1P30542 326 aa27.4■■□□□ 1.98
SYNGR3-206ENST00000618464 MLLT1Q03111 559 aaPredicted RBP27.4■■□□□ 1.98
SYNGR3-206ENST00000618464 RASA3Q14644 834 aa27.4■■□□□ 1.98
SYNGR3-206ENST00000618464 FTSJ3Q8IY81 847 aaKnown RBP27.4■■□□□ 1.98
SYNGR3-206ENST00000618464 NBPF12Q5TAG4 269 aaPredicted RBP27.39■■□□□ 1.98
SYNGR3-206ENST00000618464 TEKT1Q969V4 418 aa27.39■■□□□ 1.98
SYNGR3-206ENST00000618464 TCP10L2B9ZVM9 353 aa27.38■■□□□ 1.97
SYNGR3-206ENST00000618464 TBC1D8O95759 1140 aa27.38■■□□□ 1.97
SYNGR3-206ENST00000618464 PHKA1P46020 1223 aa27.38■■□□□ 1.97
SYNGR3-206ENST00000618464 LDLRAD1Q5T700 205 aa27.38■■□□□ 1.97
SYNGR3-206ENST00000618464 WDR66Q8TBY9 1149 aa27.38■■□□□ 1.97
SYNGR3-206ENST00000618464 PNMA6EA0A0J9YXQ4 647 aa27.37■■□□□ 1.97
SYNGR3-206ENST00000618464 TM4SF4P48230 202 aa27.37■■□□□ 1.97
SYNGR3-206ENST00000618464 HDLBPQ00341 1268 aaKnown RBP27.37■■□□□ 1.97
SYNGR3-206ENST00000618464 TFCP2Q12800 502 aa27.37■■□□□ 1.97
SYNGR3-206ENST00000618464 TNFAIP1Q13829 316 aa27.37■■□□□ 1.97
SYNGR3-206ENST00000618464 SUPT20HL1Q3ZLR7 823 aa27.37■■□□□ 1.97
SYNGR3-206ENST00000618464 GNL3LQ9NVN8 582 aaKnown RBP27.37■■□□□ 1.97
SYNGR3-206ENST00000618464 RLBP1P12271 317 aa27.36■■□□□ 1.97
SYNGR3-206ENST00000618464 TIMM10P62072 90 aa27.36■■□□□ 1.97
SYNGR3-206ENST00000618464 ITPRIPQ8IWB1 547 aa27.36■■□□□ 1.97
SYNGR3-206ENST00000618464 SUGT1Q9Y2Z0 365 aa27.36■■□□□ 1.97
SYNGR3-206ENST00000618464 MAST3O60307 1309 aa27.36■■□□□ 1.97
SYNGR3-206ENST00000618464 PPP1R12BO60237 982 aaPredicted RBP27.35■■□□□ 1.97
SYNGR3-206ENST00000618464 CACNB3P54284 484 aa27.35■■□□□ 1.97
SYNGR3-206ENST00000618464 CTU1Q7Z7A3 348 aaKnown RBP27.35■■□□□ 1.97
SYNGR3-206ENST00000618464 CCDC102BQ68D86 513 aa27.34■■□□□ 1.97
SYNGR3-206ENST00000618464 CDAN1Q8IWY9 1227 aa27.34■■□□□ 1.97
SYNGR3-206ENST00000618464 ZDHHC15Q96MV8 337 aa27.34■■□□□ 1.97
SYNGR3-206ENST00000618464 C1orf115Q9H7X2 142 aa27.34■■□□□ 1.97
SYNGR3-206ENST00000618464 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.34■■□□□ 1.97
SYNGR3-206ENST00000618464 A0A1B0GUL7 405 aa27.33■■□□□ 1.97
SYNGR3-206ENST00000618464 CLMNQ96JQ2 1002 aa27.33■■□□□ 1.97
SYNGR3-206ENST00000618464 TMEM39BQ9GZU3 492 aa27.33■■□□□ 1.97
SYNGR3-206ENST00000618464 PRDX5P30044 214 aa27.32■■□□□ 1.96
SYNGR3-206ENST00000618464 TNNI2P48788 182 aa27.32■■□□□ 1.96
SYNGR3-206ENST00000618464 MAP3K11Q16584 847 aa27.32■■□□□ 1.96
SYNGR3-206ENST00000618464 SPRYD7Q5W111 196 aa27.32■■□□□ 1.96
SYNGR3-206ENST00000618464 ZNF296Q8WUU4 475 aaPredicted RBP27.32■■□□□ 1.96
SYNGR3-206ENST00000618464 DENND2AQ9ULE3 1009 aa27.32■■□□□ 1.96
SYNGR3-206ENST00000618464 AKAP2Q9Y2D5 859 aa27.32■■□□□ 1.96
SYNGR3-206ENST00000618464 G3BP1Q13283 466 aaKnown RBP eCLIP27.31■■□□□ 1.96
SYNGR3-206ENST00000618464 APOBEC3HQ6NTF7 200 aaKnown RBP27.31■■□□□ 1.96
SYNGR3-206ENST00000618464 SLC10A4Q96EP9 437 aa27.31■■□□□ 1.96
SYNGR3-206ENST00000618464 XAGE2Q96GT9 111 aa27.31■■□□□ 1.96
SYNGR3-206ENST00000618464 MRIQ9BWK5 157 aa27.31■■□□□ 1.96
SYNGR3-206ENST00000618464 TMOD2Q9NZR1 351 aa27.31■■□□□ 1.96
SYNGR3-206ENST00000618464 SEMA3EO15041 775 aa27.3■■□□□ 1.96
SYNGR3-206ENST00000618464 LDHBP07195 334 aaKnown RBP27.3■■□□□ 1.96
SYNGR3-206ENST00000618464 SREBF2Q12772 1141 aa27.3■■□□□ 1.96
SYNGR3-206ENST00000618464 DIXDC1Q155Q3 683 aa27.3■■□□□ 1.96
SYNGR3-206ENST00000618464 HHIPL2Q6UWX4 724 aa27.3■■□□□ 1.96
SYNGR3-206ENST00000618464 TEPSINQ96N21 525 aa27.3■■□□□ 1.96
SYNGR3-206ENST00000618464 NEUROD6Q96NK8 337 aa27.3■■□□□ 1.96
SYNGR3-206ENST00000618464 USP2O75604 605 aaPredicted RBP27.29■■□□□ 1.96
SYNGR3-206ENST00000618464 IREB2P48200 963 aaKnown RBP27.29■■□□□ 1.96
SYNGR3-206ENST00000618464 R3HDMLQ9H3Y0 253 aa27.29■■□□□ 1.96
SYNGR3-206ENST00000618464 GPR25O00155 361 aa27.28■■□□□ 1.96
SYNGR3-206ENST00000618464 RASGRF1Q13972 1273 aa27.28■■□□□ 1.96
SYNGR3-206ENST00000618464 PANK1Q8TE04 598 aa27.28■■□□□ 1.96
SYNGR3-206ENST00000618464 SALL1Q9NSC2 1324 aa27.27■■□□□ 1.96
SYNGR3-206ENST00000618464 ZBTB7BO15156 539 aaPredicted RBP27.27■■□□□ 1.96
SYNGR3-206ENST00000618464 SOX10P56693 466 aa27.27■■□□□ 1.96
SYNGR3-206ENST00000618464 POLA2Q14181 598 aa27.27■■□□□ 1.96
SYNGR3-206ENST00000618464 MVPQ14764 893 aaKnown RBP27.27■■□□□ 1.96
SYNGR3-206ENST00000618464 DAGLAQ9Y4D2 1042 aa27.27■■□□□ 1.96
SYNGR3-206ENST00000618464 ATP8B2P98198 1209 aa27.26■■□□□ 1.95
SYNGR3-206ENST00000618464 WNK4Q96J92 1243 aa27.26■■□□□ 1.95
SYNGR3-206ENST00000618464 OS9Q13438 667 aaPredicted RBP27.25■■□□□ 1.95
SYNGR3-206ENST00000618464 GORABQ5T7V8 394 aa27.25■■□□□ 1.95
SYNGR3-206ENST00000618464 ANKRD13AQ8IZ07 590 aa27.25■■□□□ 1.95
SYNGR3-206ENST00000618464 HPS5Q9UPZ3 1129 aa27.25■■□□□ 1.95
SYNGR3-206ENST00000618464 OTOFQ9HC10 1997 aa27.24■■□□□ 1.95
SYNGR3-206ENST00000618464 NOM1Q5C9Z4 860 aaKnown RBP27.24■■□□□ 1.95
SYNGR3-206ENST00000618464 SSH3Q8TE77 659 aa27.24■■□□□ 1.95
SYNGR3-206ENST00000618464 CFHR5Q9BXR6 569 aa27.24■■□□□ 1.95
SYNGR3-206ENST00000618464 ABCF2Q9UG63 623 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms