RNA–Protein interactions for RNA: ENST00000618001.4

TGIF1-223, Transcript of TGFB induced factor homeobox 1, human

TSL 2 BASIC

Gene TGIF1, Length 3,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TGIF1-223	ENST00000618001	IPO9	Q96P70	1041 aa	Known RBP	10.26	□□□□□ -0.77
TGIF1-223	ENST00000618001	BICC1	Q9H694	974 aa	Known RBP	10.26	□□□□□ -0.77
TGIF1-223	ENST00000618001	HPS5	Q9UPZ3	1129 aa		10.26	□□□□□ -0.77
TGIF1-223	ENST00000618001	AOX1	Q06278	1338 aa		10.26	□□□□□ -0.77
TGIF1-223	ENST00000618001	SLC34A2	O95436	690 aa		10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	MFSD14B	Q5SR56	506 aa		10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	MRI	Q9BWK5	157 aa		10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	PUS3	Q9BZE2	481 aa	Known RBP	10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	ZBTB22	O15209	634 aa		10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	IREB2	P48200	963 aa	Known RBP	10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	ALDH1L2	Q3SY69	923 aa		10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	IFNL1	Q8IU54	200 aa		10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	TBC1D22A	Q8WUA7	517 aa		10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	SLC10A4	Q96EP9	437 aa		10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	FKTN	O75072	461 aa		10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	USP2	O75604	605 aa	Predicted RBP	10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	GYG1	P46976	350 aa		10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	RASA3	Q14644	834 aa		10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	FBXO46	Q6PJ61	603 aa	Predicted RBP	10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	TEPSIN	Q96N21	525 aa		10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	ZNF70	Q9UC06	446 aa	Predicted RBP	10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	SUGT1	Q9Y2Z0	365 aa		10.25	□□□□□ -0.77
TGIF1-223	ENST00000618001	CLRN2	A0PK11	232 aa		10.24	□□□□□ -0.77
TGIF1-223	ENST00000618001		F8W031	263 aa	Predicted RBP	10.24	□□□□□ -0.77
TGIF1-223	ENST00000618001	PDE8B	O95263	885 aa		10.24	□□□□□ -0.77
TGIF1-223	ENST00000618001	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.24	□□□□□ -0.77
TGIF1-223	ENST00000618001	ANKRD13A	Q8IZ07	590 aa		10.24	□□□□□ -0.77
TGIF1-223	ENST00000618001	TTF2	Q9UNY4	1162 aa	Known RBP	10.24	□□□□□ -0.77
TGIF1-223	ENST00000618001	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.24	□□□□□ -0.77
TGIF1-223	ENST00000618001	PLIN1	O60240	522 aa		10.24	□□□□□ -0.77
TGIF1-223	ENST00000618001	FGFR2	P21802	821 aa		10.24	□□□□□ -0.77
TGIF1-223	ENST00000618001	SLFN5	Q08AF3	891 aa		10.24	□□□□□ -0.77
TGIF1-223	ENST00000618001	DZIP1L	Q8IYY4	767 aa	Known RBP	10.24	□□□□□ -0.77
TGIF1-223	ENST00000618001	RBBP6	Q7Z6E9	1792 aa	Known RBP	10.24	□□□□□ -0.77
TGIF1-223	ENST00000618001	CRK	P46108	304 aa		10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	PRKG1	Q13976	671 aa		10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	TRMT2A	Q8IZ69	625 aa	Known RBP	10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	CLMN	Q96JQ2	1002 aa		10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	USP44	Q9H0E7	712 aa		10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	VEZT	Q9HBM0	779 aa		10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	MKRN3	Q13064	507 aa	Known RBP	10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	CAVIN4	Q5BKX8	364 aa		10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	FKBP1C	Q5VVH2	108 aa		10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	SSH1	Q8WYL5	1049 aa		10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	FZD1	Q9UP38	647 aa		10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	JAG2	Q9Y219	1238 aa		10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	IGF2BP3	O00425	579 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	CT47B1	P0C2W7	299 aa	Predicted RBP	10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	GJA5	P36382	358 aa		10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	LRRC24	Q50LG9	513 aa		10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	R3HDML	Q9H3Y0	253 aa		10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	FBXO3	Q9UK99	471 aa		10.23	□□□□□ -0.77
TGIF1-223	ENST00000618001	RFX5	P48382	616 aa	Predicted RBP	10.22	□□□□□ -0.77
TGIF1-223	ENST00000618001	TNNI2	P48788	182 aa		10.22	□□□□□ -0.77
TGIF1-223	ENST00000618001	RBM5	P52756	815 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
TGIF1-223	ENST00000618001	PUM3	Q15397	648 aa	Known RBP	10.22	□□□□□ -0.77
TGIF1-223	ENST00000618001	METTL24	Q5JXM2	366 aa		10.22	□□□□□ -0.77
TGIF1-223	ENST00000618001	ZDHHC15	Q96MV8	337 aa		10.22	□□□□□ -0.77
TGIF1-223	ENST00000618001	PPP4R2	Q9NY27	417 aa		10.22	□□□□□ -0.77
TGIF1-223	ENST00000618001	MAST3	O60307	1309 aa		10.22	□□□□□ -0.77
TGIF1-223	ENST00000618001	SOX10	P56693	466 aa		10.22	□□□□□ -0.77
TGIF1-223	ENST00000618001	TDRD3	Q9H7E2	651 aa	Known RBP	10.22	□□□□□ -0.77
TGIF1-223	ENST00000618001	HTT	P42858	3142 aa		10.21	□□□□□ -0.77
TGIF1-223	ENST00000618001	OTUD7B	Q6GQQ9	843 aa		10.21	□□□□□ -0.77
TGIF1-223	ENST00000618001	FAM83A	Q86UY5	434 aa		10.21	□□□□□ -0.77
TGIF1-223	ENST00000618001	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.21	□□□□□ -0.77
TGIF1-223	ENST00000618001	VPS37D	Q86XT2	251 aa		10.21	□□□□□ -0.78
TGIF1-223	ENST00000618001	TEKT1	Q969V4	418 aa		10.21	□□□□□ -0.78
TGIF1-223	ENST00000618001	MS4A4A	Q96JQ5	239 aa		10.21	□□□□□ -0.78
TGIF1-223	ENST00000618001	MYH13	Q9UKX3	1938 aa		10.21	□□□□□ -0.78
TGIF1-223	ENST00000618001	CIAO1	O76071	339 aa		10.2	□□□□□ -0.78
TGIF1-223	ENST00000618001	GRIK5	Q16478	980 aa		10.2	□□□□□ -0.78
TGIF1-223	ENST00000618001	HHIPL2	Q6UWX4	724 aa		10.2	□□□□□ -0.78
TGIF1-223	ENST00000618001	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.2	□□□□□ -0.78
TGIF1-223	ENST00000618001	ZCCHC17	Q9NP64	241 aa	Known RBP	10.2	□□□□□ -0.78
TGIF1-223	ENST00000618001	EYA2	O00167	538 aa		10.2	□□□□□ -0.78
TGIF1-223	ENST00000618001	IFIT1	P09914	478 aa	Known RBP	10.2	□□□□□ -0.78
TGIF1-223	ENST00000618001	OPTN	Q96CV9	577 aa		10.2	□□□□□ -0.78
TGIF1-223	ENST00000618001	HOOK2	Q96ED9	719 aa		10.2	□□□□□ -0.78
TGIF1-223	ENST00000618001	ERO1A	Q96HE7	468 aa		10.2	□□□□□ -0.78
TGIF1-223	ENST00000618001	PTPN18	Q99952	460 aa		10.2	□□□□□ -0.78
TGIF1-223	ENST00000618001	LPIN2	Q92539	896 aa		10.2	□□□□□ -0.78
TGIF1-223	ENST00000618001	TMEM39B	Q9GZU3	492 aa		10.2	□□□□□ -0.78
TGIF1-223	ENST00000618001	SALL1	Q9NSC2	1324 aa		10.19	□□□□□ -0.78
TGIF1-223	ENST00000618001	BCAM	P50895	628 aa		10.19	□□□□□ -0.78
TGIF1-223	ENST00000618001	MAP3K9	P80192	1104 aa		10.19	□□□□□ -0.78
TGIF1-223	ENST00000618001	CRHR2	Q13324	411 aa		10.19	□□□□□ -0.78
TGIF1-223	ENST00000618001	VGLL4	Q14135	290 aa		10.19	□□□□□ -0.78
TGIF1-223	ENST00000618001	INTS3	Q68E01	1043 aa	Known RBP	10.19	□□□□□ -0.78
TGIF1-223	ENST00000618001	APOBEC3H	Q6NTF7	200 aa	Known RBP	10.19	□□□□□ -0.78
TGIF1-223	ENST00000618001	OTOP1	Q7RTM1	612 aa		10.19	□□□□□ -0.78
TGIF1-223	ENST00000618001	ATG9A	Q7Z3C6	839 aa		10.19	□□□□□ -0.78
TGIF1-223	ENST00000618001	SPDYE5	A6NIY4	337 aa		10.19	□□□□□ -0.78
TGIF1-223	ENST00000618001	ANP32A	P39687	249 aa	Known RBP	10.19	□□□□□ -0.78
TGIF1-223	ENST00000618001	GTF2A2	P52657	109 aa		10.19	□□□□□ -0.78
TGIF1-223	ENST00000618001	CDAN1	Q8IWY9	1227 aa		10.19	□□□□□ -0.78
TGIF1-223	ENST00000618001	WDR66	Q8TBY9	1149 aa		10.19	□□□□□ -0.78
TGIF1-223	ENST00000618001	ELP3	Q9H9T3	547 aa		10.19	□□□□□ -0.78
TGIF1-223	ENST00000618001	TCP10L2	B9ZVM9	353 aa		10.18	□□□□□ -0.78
TGIF1-223	ENST00000618001	SLC5A1	P13866	664 aa		10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms