RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 CLRN2A0PK11 232 aa13.24□□□□□ -0.29
COL4A1-205ENST00000615732 TAF7LQ5H9L4 462 aa13.24□□□□□ -0.29
COL4A1-205ENST00000615732 SPRYD7Q5W111 196 aa13.24□□□□□ -0.29
COL4A1-205ENST00000615732 FBXO46Q6PJ61 603 aaPredicted RBP13.24□□□□□ -0.29
COL4A1-205ENST00000615732 ANKRD44Q8N8A2 993 aa13.24□□□□□ -0.29
COL4A1-205ENST00000615732 SRCIN1Q9C0H9 1055 aa13.24□□□□□ -0.29
COL4A1-205ENST00000615732 ECM29Q5VYK3 1845 aa13.24□□□□□ -0.29
COL4A1-205ENST00000615732 MKI67P46013 3256 aaKnown RBP13.23□□□□□ -0.29
COL4A1-205ENST00000615732 ANP32AP39687 249 aaKnown RBP13.23□□□□□ -0.29
COL4A1-205ENST00000615732 NUCB1Q02818 461 aa13.23□□□□□ -0.29
COL4A1-205ENST00000615732 DLGAP5Q15398 846 aa13.23□□□□□ -0.29
COL4A1-205ENST00000615732 LDLRAD1Q5T700 205 aa13.23□□□□□ -0.29
COL4A1-205ENST00000615732 CEP85Q6P2H3 762 aa13.23□□□□□ -0.29
COL4A1-205ENST00000615732 ARMC9Q7Z3E5 817 aa13.23□□□□□ -0.29
COL4A1-205ENST00000615732 ZNF804AQ7Z570 1209 aa13.23□□□□□ -0.29
COL4A1-205ENST00000615732 VEZTQ9HBM0 779 aa13.23□□□□□ -0.29
COL4A1-205ENST00000615732 ANGEL1Q9UNK9 670 aaKnown RBP13.23□□□□□ -0.29
COL4A1-205ENST00000615732 CENPFP49454 3210 aa13.23□□□□□ -0.29
COL4A1-205ENST00000615732 GRM8O00222 908 aa13.22□□□□□ -0.29
COL4A1-205ENST00000615732 FKTNO75072 461 aa13.22□□□□□ -0.29
COL4A1-205ENST00000615732 UBTFL1P0CB47 393 aaPredicted RBP13.22□□□□□ -0.29
COL4A1-205ENST00000615732 MMP14P50281 582 aa13.22□□□□□ -0.29
COL4A1-205ENST00000615732 CCDC57Q2TAC2 916 aa13.22□□□□□ -0.29
COL4A1-205ENST00000615732 CFAP100Q494V2 611 aa13.22□□□□□ -0.29
COL4A1-205ENST00000615732 ANKRD45Q5TZF3 282 aa13.22□□□□□ -0.29
COL4A1-205ENST00000615732 CHD1LQ86WJ1 897 aa13.22□□□□□ -0.29
COL4A1-205ENST00000615732 DEFB129Q9H1M3 183 aa13.22□□□□□ -0.29
COL4A1-205ENST00000615732 CNNM1Q9NRU3 951 aa13.22□□□□□ -0.29
COL4A1-205ENST00000615732 BRCA2P51587 3418 aa13.22□□□□□ -0.29
COL4A1-205ENST00000615732 IL1R1P14778 569 aa13.21□□□□□ -0.29
COL4A1-205ENST00000615732 LDHAL6AQ6ZMR3 332 aa13.21□□□□□ -0.29
COL4A1-205ENST00000615732 SIRT2Q8IXJ6 389 aa13.21□□□□□ -0.29
COL4A1-205ENST00000615732 SUCLG2Q96I99 432 aa13.21□□□□□ -0.29
COL4A1-205ENST00000615732 CLMNQ96JQ2 1002 aa13.21□□□□□ -0.29
COL4A1-205ENST00000615732 LNPKQ9C0E8 428 aa13.21□□□□□ -0.29
COL4A1-205ENST00000615732 C9orf78Q9NZ63 289 aaPredicted RBP13.21□□□□□ -0.29
COL4A1-205ENST00000615732 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
COL4A1-205ENST00000615732 ALDH1L1O75891 902 aa13.2□□□□□ -0.3
COL4A1-205ENST00000615732 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
COL4A1-205ENST00000615732 RBM5P52756 815 aaKnown RBP eCLIP13.2□□□□□ -0.3
COL4A1-205ENST00000615732 MAP3K11Q16584 847 aa13.2□□□□□ -0.3
COL4A1-205ENST00000615732 C15orf52Q6ZUT6 534 aaKnown RBP13.2□□□□□ -0.3
COL4A1-205ENST00000615732 PUS3Q9BZE2 481 aaKnown RBP13.2□□□□□ -0.3
COL4A1-205ENST00000615732 HDAC5Q9UQL6 1122 aa13.2□□□□□ -0.3
COL4A1-205ENST00000615732 OTOFQ9HC10 1997 aa13.2□□□□□ -0.3
COL4A1-205ENST00000615732 IGF2BP3O00425 579 aaKnown RBP eCLIP13.19□□□□□ -0.3
COL4A1-205ENST00000615732 ALDH1A1P00352 501 aa13.19□□□□□ -0.3
COL4A1-205ENST00000615732 GYG1P46976 350 aa13.19□□□□□ -0.3
COL4A1-205ENST00000615732 C8orf34Q49A92 452 aa13.19□□□□□ -0.3
COL4A1-205ENST00000615732 IFNL1Q8IU54 200 aa13.19□□□□□ -0.3
COL4A1-205ENST00000615732 MTMR14Q8NCE2 650 aa13.19□□□□□ -0.3
COL4A1-205ENST00000615732 WNK4Q96J92 1243 aa13.19□□□□□ -0.3
COL4A1-205ENST00000615732 DCTPP1Q9H773 170 aa13.19□□□□□ -0.3
COL4A1-205ENST00000615732 RBBP6Q7Z6E9 1792 aaKnown RBP13.18□□□□□ -0.3
COL4A1-205ENST00000615732 MANSC4A6NHS7 340 aaPredicted RBP13.18□□□□□ -0.3
COL4A1-205ENST00000615732 NBPF7P0C2Y1 421 aaPredicted RBP13.18□□□□□ -0.3
COL4A1-205ENST00000615732 ZBTB48P10074 688 aaPredicted RBP13.18□□□□□ -0.3
COL4A1-205ENST00000615732 MFSD14BQ5SR56 506 aa13.18□□□□□ -0.3
COL4A1-205ENST00000615732 NBPF12Q5TAG4 269 aaPredicted RBP13.18□□□□□ -0.3
COL4A1-205ENST00000615732 OTOP1Q7RTM1 612 aa13.18□□□□□ -0.3
COL4A1-205ENST00000615732 CDAN1Q8IWY9 1227 aa13.18□□□□□ -0.3
COL4A1-205ENST00000615732 KAZALD1Q96I82 304 aa13.18□□□□□ -0.3
COL4A1-205ENST00000615732 PRMT6Q96LA8 375 aaPredicted RBP13.18□□□□□ -0.3
COL4A1-205ENST00000615732 IQSEC3Q9UPP2 1182 aaPredicted RBP13.18□□□□□ -0.3
COL4A1-205ENST00000615732 TRIM17Q9Y577 477 aa13.18□□□□□ -0.3
COL4A1-205ENST00000615732 PPP2R3BQ9Y5P8 575 aa13.18□□□□□ -0.3
COL4A1-205ENST00000615732 LRRFIP2Q9Y608 721 aaKnown RBP13.18□□□□□ -0.3
COL4A1-205ENST00000615732 MYO1BO43795 1136 aa13.17□□□□□ -0.3
COL4A1-205ENST00000615732 GJA5P36382 358 aa13.17□□□□□ -0.3
COL4A1-205ENST00000615732 SLC10A4Q96EP9 437 aa13.17□□□□□ -0.3
COL4A1-205ENST00000615732 ARAP2Q8WZ64 1704 aa13.16□□□□□ -0.3
COL4A1-205ENST00000615732 POTEFA5A3E0 1075 aa13.16□□□□□ -0.3
COL4A1-205ENST00000615732 PPP1R12BO60237 982 aaPredicted RBP13.16□□□□□ -0.3
COL4A1-205ENST00000615732 INHBEP58166 350 aa13.16□□□□□ -0.3
COL4A1-205ENST00000615732 FKBP1AP62942 108 aaKnown RBP13.16□□□□□ -0.3
COL4A1-205ENST00000615732 ATP8B2P98198 1209 aa13.16□□□□□ -0.3
COL4A1-205ENST00000615732 CHAF1AQ13111 956 aaPredicted RBP13.16□□□□□ -0.3
COL4A1-205ENST00000615732 RASA3Q14644 834 aa13.16□□□□□ -0.3
COL4A1-205ENST00000615732 LRRC24Q50LG9 513 aa13.16□□□□□ -0.3
COL4A1-205ENST00000615732 USP44Q9H0E7 712 aa13.16□□□□□ -0.3
COL4A1-205ENST00000615732 BICC1Q9H694 974 aaKnown RBP13.16□□□□□ -0.3
COL4A1-205ENST00000615732 TTF2Q9UNY4 1162 aaKnown RBP13.16□□□□□ -0.3
COL4A1-205ENST00000615732 FAM205AQ6ZU69 1335 aa13.15□□□□□ -0.3
COL4A1-205ENST00000615732 HIBADHP31937 336 aaKnown RBP13.15□□□□□ -0.3
COL4A1-205ENST00000615732 UBE4AQ14139 1066 aa13.15□□□□□ -0.3
COL4A1-205ENST00000615732 GRIK5Q16478 980 aa13.15□□□□□ -0.3
COL4A1-205ENST00000615732 SPDYE2Q495Y8 402 aa13.15□□□□□ -0.3
COL4A1-205ENST00000615732 TDRD7Q8NHU6 1098 aaKnown RBP13.15□□□□□ -0.3
COL4A1-205ENST00000615732 KLHDC4Q8TBB5 520 aa13.15□□□□□ -0.3
COL4A1-205ENST00000615732 CD99L2Q8TCZ2 262 aa13.15□□□□□ -0.3
COL4A1-205ENST00000615732 FAM84BQ96KN1 310 aaPredicted RBP13.15□□□□□ -0.3
COL4A1-205ENST00000615732 TDRD3Q9H7E2 651 aaKnown RBP13.15□□□□□ -0.3
COL4A1-205ENST00000615732 ZNF70Q9UC06 446 aaPredicted RBP13.15□□□□□ -0.3
COL4A1-205ENST00000615732 TCP10L2B9ZVM9 353 aa13.14□□□□□ -0.31
COL4A1-205ENST00000615732 APBB1O00213 710 aa13.14□□□□□ -0.31
COL4A1-205ENST00000615732 IREB2P48200 963 aaKnown RBP13.14□□□□□ -0.31
COL4A1-205ENST00000615732 CAP1Q01518 475 aa13.14□□□□□ -0.31
COL4A1-205ENST00000615732 CRHR2Q13324 411 aa13.14□□□□□ -0.31
COL4A1-205ENST00000615732 SUPT20HL1Q3ZLR7 823 aa13.14□□□□□ -0.31
COL4A1-205ENST00000615732 METTL24Q5JXM2 366 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms