RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 ZNF500O60304 480 aaPredicted RBP16.17■□□□□ 0.18
SSBP2-220ENST00000615665 SKILP12757 684 aa16.17■□□□□ 0.18
SSBP2-220ENST00000615665 PDE4CQ08493 712 aa16.17■□□□□ 0.18
SSBP2-220ENST00000615665 IFIT1BQ5T764 474 aaKnown RBP16.17■□□□□ 0.18
SSBP2-220ENST00000615665 ANO1Q5XXA6 986 aa16.17■□□□□ 0.18
SSBP2-220ENST00000615665 MAGEC2Q9UBF1 373 aaPredicted RBP16.17■□□□□ 0.18
SSBP2-220ENST00000615665 TSPY2A6NKD2 308 aa16.16■□□□□ 0.18
SSBP2-220ENST00000615665 SPATA5Q8NB90 893 aa16.16■□□□□ 0.18
SSBP2-220ENST00000615665 PDIA3P30101 505 aaKnown RBP16.16■□□□□ 0.18
SSBP2-220ENST00000615665 PDE4BQ07343 736 aa16.16■□□□□ 0.18
SSBP2-220ENST00000615665 STIM1Q13586 685 aa16.16■□□□□ 0.18
SSBP2-220ENST00000615665 NLRP3Q96P20 1036 aa16.16■□□□□ 0.18
SSBP2-220ENST00000615665 USP28Q96RU2 1077 aa16.16■□□□□ 0.18
SSBP2-220ENST00000615665 CCDC150Q8NCX0 1101 aa16.16■□□□□ 0.18
SSBP2-220ENST00000615665 ZKSCAN3Q9BRR0 538 aa16.16■□□□□ 0.18
SSBP2-220ENST00000615665 PDIA6Q15084 440 aa16.15■□□□□ 0.18
SSBP2-220ENST00000615665 ZNF287Q9HBT7 754 aa16.15■□□□□ 0.18
SSBP2-220ENST00000615665 TOB2Q14106 344 aaPredicted RBP16.15■□□□□ 0.18
SSBP2-220ENST00000615665 SETDB2Q96T68 719 aa16.15■□□□□ 0.18
SSBP2-220ENST00000615665 M0R2C6 588 aa16.15■□□□□ 0.18
SSBP2-220ENST00000615665 KANK3Q6NY19 840 aa16.15■□□□□ 0.18
SSBP2-220ENST00000615665 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.15■□□□□ 0.18
SSBP2-220ENST00000615665 NSUN7Q8NE18 718 aaKnown RBP16.15■□□□□ 0.18
SSBP2-220ENST00000615665 CDK5RAP3Q96JB5 506 aa16.15■□□□□ 0.18
SSBP2-220ENST00000615665 RABL6Q3YEC7 729 aaPredicted RBP16.15■□□□□ 0.18
SSBP2-220ENST00000615665 ZNF75DP51815 510 aa16.14■□□□□ 0.17
SSBP2-220ENST00000615665 ZNF444Q8N0Y2 327 aaPredicted RBP16.14■□□□□ 0.17
SSBP2-220ENST00000615665 UTYO14607 1347 aa16.14■□□□□ 0.17
SSBP2-220ENST00000615665 KIF5BP33176 963 aa16.14■□□□□ 0.17
SSBP2-220ENST00000615665 SPTY2D1Q68D10 685 aaPredicted RBP16.14■□□□□ 0.17
SSBP2-220ENST00000615665 OSBP2Q969R2 916 aa16.14■□□□□ 0.17
SSBP2-220ENST00000615665 VIRMAQ69YN4 1812 aaKnown RBP16.14■□□□□ 0.17
SSBP2-220ENST00000615665 NBPF26B4DH59 902 aa16.14■□□□□ 0.17
SSBP2-220ENST00000615665 PDE6AP16499 860 aa16.14■□□□□ 0.17
SSBP2-220ENST00000615665 NBPF14Q5TI25 921 aa16.14■□□□□ 0.17
SSBP2-220ENST00000615665 NBPF10Q6P3W6 841 aaKnown RBP16.14■□□□□ 0.17
SSBP2-220ENST00000615665 C17orf53Q8N3J3 647 aaPredicted RBP16.14■□□□□ 0.17
SSBP2-220ENST00000615665 NBPF15Q8N660 670 aa16.14■□□□□ 0.17
SSBP2-220ENST00000615665 ZBTB1Q9Y2K1 713 aa16.14■□□□□ 0.17
SSBP2-220ENST00000615665 RTL9Q8NET4 1388 aa16.14■□□□□ 0.17
SSBP2-220ENST00000615665 LMOD1P29536 600 aaPredicted RBP16.13■□□□□ 0.17
SSBP2-220ENST00000615665 CEP135Q66GS9 1140 aa16.13■□□□□ 0.17
SSBP2-220ENST00000615665 ZHX1Q9UKY1 873 aaPredicted RBP16.13■□□□□ 0.17
SSBP2-220ENST00000615665 RIMS1Q86UR5 1692 aaKnown RBP16.13■□□□□ 0.17
SSBP2-220ENST00000615665 PDE8BO95263 885 aa16.13■□□□□ 0.17
SSBP2-220ENST00000615665 UBASH3AP57075 661 aa16.13■□□□□ 0.17
SSBP2-220ENST00000615665 PHKBQ93100 1093 aa16.13■□□□□ 0.17
SSBP2-220ENST00000615665 RFX7Q2KHR2 1363 aa16.13■□□□□ 0.17
SSBP2-220ENST00000615665 ZSCAN12O43309 604 aa16.13■□□□□ 0.17
SSBP2-220ENST00000615665 PIGBQ92521 554 aa16.13■□□□□ 0.17
SSBP2-220ENST00000615665 MYL10Q9BUA6 226 aa16.13■□□□□ 0.17
SSBP2-220ENST00000615665 NRXN3Q9Y4C0 1643 aa16.13■□□□□ 0.17
SSBP2-220ENST00000615665 OVOS2A0A0G2JMS6 1433 aa16.13■□□□□ 0.17
SSBP2-220ENST00000615665 YEATS4O95619 227 aa16.13■□□□□ 0.17
SSBP2-220ENST00000615665 ATP2B2Q01814 1243 aa16.13■□□□□ 0.17
SSBP2-220ENST00000615665 CTDSPL2Q05D32 466 aa16.13■□□□□ 0.17
SSBP2-220ENST00000615665 GOLGA6L1Q8N7Z2 621 aa16.13■□□□□ 0.17
SSBP2-220ENST00000615665 KAT14Q9H8E8 782 aa16.13■□□□□ 0.17
SSBP2-220ENST00000615665 PAXBP1Q9Y5B6 917 aa16.13■□□□□ 0.17
SSBP2-220ENST00000615665 GPS2Q13227 327 aa16.12■□□□□ 0.17
SSBP2-220ENST00000615665 SLC4A8Q2Y0W8 1093 aa16.12■□□□□ 0.17
SSBP2-220ENST00000615665 MYSM1Q5VVJ2 828 aa16.12■□□□□ 0.17
SSBP2-220ENST00000615665 KRT40Q6A162 431 aa16.12■□□□□ 0.17
SSBP2-220ENST00000615665 NLRP10Q86W26 655 aa16.12■□□□□ 0.17
SSBP2-220ENST00000615665 RPAP1Q9BWH6 1393 aaPredicted RBP16.12■□□□□ 0.17
SSBP2-220ENST00000615665 CCDC194A0A1B0GVG4 234 aa16.12■□□□□ 0.17
SSBP2-220ENST00000615665 PHKA1P46020 1223 aa16.12■□□□□ 0.17
SSBP2-220ENST00000615665 PI16Q6UXB8 463 aa16.12■□□□□ 0.17
SSBP2-220ENST00000615665 TRIM75PA6NK02 468 aa16.11■□□□□ 0.17
SSBP2-220ENST00000615665 CBX1P83916 185 aa16.11■□□□□ 0.17
SSBP2-220ENST00000615665 SLFNL1Q499Z3 407 aa16.11■□□□□ 0.17
SSBP2-220ENST00000615665 RPGRQ92834 1020 aaKnown RBP16.11■□□□□ 0.17
SSBP2-220ENST00000615665 NYXQ9GZU5 481 aa16.11■□□□□ 0.17
SSBP2-220ENST00000615665 AKAP12Q02952 1782 aa16.11■□□□□ 0.17
SSBP2-220ENST00000615665 PXDNQ92626 1479 aa16.11■□□□□ 0.17
SSBP2-220ENST00000615665 BMP15O95972 392 aa16.11■□□□□ 0.17
SSBP2-220ENST00000615665 FOXO4P98177 505 aa16.11■□□□□ 0.17
SSBP2-220ENST00000615665 SNW1Q13573 536 aaKnown RBP16.11■□□□□ 0.17
SSBP2-220ENST00000615665 TICAM2Q86XR7 235 aa16.11■□□□□ 0.17
SSBP2-220ENST00000615665 KRI1Q8N9T8 703 aaKnown RBP16.11■□□□□ 0.17
SSBP2-220ENST00000615665 PATL2C9JE40 543 aaKnown RBP16.11■□□□□ 0.17
SSBP2-220ENST00000615665 BAG3O95817 575 aa16.11■□□□□ 0.17
SSBP2-220ENST00000615665 LDHCP07864 332 aa16.11■□□□□ 0.17
SSBP2-220ENST00000615665 TERF1P54274 439 aa16.11■□□□□ 0.17
SSBP2-220ENST00000615665 UBE3CQ15386 1083 aa16.11■□□□□ 0.17
SSBP2-220ENST00000615665 SKIDA1Q1XH10 827 aa16.11■□□□□ 0.17
SSBP2-220ENST00000615665 IFNKQ9P0W0 207 aa16.11■□□□□ 0.17
SSBP2-220ENST00000615665 ADALQ6DHV7 355 aa16.11■□□□□ 0.17
SSBP2-220ENST00000615665 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.11■□□□□ 0.17
SSBP2-220ENST00000615665 RESTQ13127 1097 aa16.1■□□□□ 0.17
SSBP2-220ENST00000615665 KAZALD1Q96I82 304 aa16.1■□□□□ 0.17
SSBP2-220ENST00000615665 MRVI1Q9Y6F6 885 aa16.1■□□□□ 0.17
SSBP2-220ENST00000615665 ZNF202O95125 648 aa16.1■□□□□ 0.17
SSBP2-220ENST00000615665 CALM1P0DP23 149 aa16.1■□□□□ 0.17
SSBP2-220ENST00000615665 CALM2P0DP24 149 aa16.1■□□□□ 0.17
SSBP2-220ENST00000615665 CALM3P0DP25 149 aa16.1■□□□□ 0.17
SSBP2-220ENST00000615665 RFC4P35249 363 aa16.1■□□□□ 0.17
SSBP2-220ENST00000615665 IL6STP40189 918 aaPredicted RBP16.1■□□□□ 0.17
SSBP2-220ENST00000615665 DENND2AQ9ULE3 1009 aa16.1■□□□□ 0.17
SSBP2-220ENST00000615665 CCDC70Q6NSX1 233 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms