RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 EPB41L4AQ9HCS5 686 aaPredicted RBP16.49■□□□□ 0.23
PCDHGA3-202ENST00000612467 ROBO1Q9Y6N7 1651 aa16.49■□□□□ 0.23
PCDHGA3-202ENST00000612467 ANKRD36CQ5JPF3 1778 aa16.49■□□□□ 0.23
PCDHGA3-202ENST00000612467 A0A1B0GVL5 298 aa16.49■□□□□ 0.23
PCDHGA3-202ENST00000612467 MICU3Q86XE3 530 aa16.49■□□□□ 0.23
PCDHGA3-202ENST00000612467 RCOR1Q9UKL0 485 aa16.49■□□□□ 0.23
PCDHGA3-202ENST00000612467 TCRBV5S4A2TA0A5A2 114 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 MBD4O95243 580 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 SNW1Q13573 536 aaKnown RBP16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 SASS6Q6UVJ0 657 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 MIGA1Q8NAN2 632 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 C8orf76Q96K31 380 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 ZKSCAN3Q9BRR0 538 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 CCDC87Q9NVE4 849 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 NIP7Q9Y221 180 aaKnown RBP eCLIP16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 MYH15Q9Y2K3 1946 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 LOC102724428A0A0B4J2F2 783 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 CPLX1O14810 134 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 FGFR2P21802 821 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 PTGS1P23219 599 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 CDC27P30260 824 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 SIK1P57059 783 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 PUM3Q15397 648 aaKnown RBP16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 LRRFIP1Q32MZ4 808 aaKnown RBP16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 C3orf67Q6ZVT6 689 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 PTF1AQ7RTS3 328 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 FSIP1Q8NA03 581 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 SPATA5Q8NB90 893 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 MPHOSPH8Q99549 860 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 PCDHA7Q9UN72 937 aa16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 MYH14Q7Z406 1995 aaKnown RBP16.48■□□□□ 0.23
PCDHGA3-202ENST00000612467 PDIA4P13667 645 aaKnown RBP16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 ZNF165P49910 485 aa16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 DNTTIP2Q5QJE6 756 aaKnown RBP16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 CCDC24Q8N4L8 307 aa16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 AIDAQ96BJ3 306 aa16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 BICDL1Q6ZP65 573 aa16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 RBM43Q6ZSC3 357 aaKnown RBP16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 LPIN2Q92539 896 aa16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 TSC1Q92574 1164 aa16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 STRBPQ96SI9 672 aaKnown RBP16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 ERVV-1B6SEH8 477 aa16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 CAMTA2O94983 1202 aa16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 TAF1P21675 1872 aa16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 ARID4AP29374 1257 aaPredicted RBP16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 EVCP57679 992 aa16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 COL14A1Q05707 1796 aaKnown RBP16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 LRMPQ12912 555 aa16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 RRP12Q5JTH9 1297 aaKnown RBP16.47■□□□□ 0.23
PCDHGA3-202ENST00000612467 CMTR1Q8N1G2 835 aaKnown RBP16.46■□□□□ 0.23
PCDHGA3-202ENST00000612467 UTP14AQ9BVJ6 771 aaKnown RBP16.46■□□□□ 0.23
PCDHGA3-202ENST00000612467 LCORLQ8N3X6 602 aa16.46■□□□□ 0.22
PCDHGA3-202ENST00000612467 CCDC82Q8N4S0 544 aa16.46■□□□□ 0.22
PCDHGA3-202ENST00000612467 ZMYND15Q9H091 742 aa16.46■□□□□ 0.22
PCDHGA3-202ENST00000612467 SPATA31A1Q5TZJ5 1347 aa16.45■□□□□ 0.22
PCDHGA3-202ENST00000612467 UQCRHLA0A096LP55 91 aa16.45■□□□□ 0.22
PCDHGA3-202ENST00000612467 UQCRHP07919 91 aa16.45■□□□□ 0.22
PCDHGA3-202ENST00000612467 TRDNQ13061 729 aa16.45■□□□□ 0.22
PCDHGA3-202ENST00000612467 NOLC1Q14978 699 aaKnown RBP eCLIP16.45■□□□□ 0.22
PCDHGA3-202ENST00000612467 FBXO18Q8NFZ0 1043 aa16.45■□□□□ 0.22
PCDHGA3-202ENST00000612467 TRIM5Q9C035 493 aa16.45■□□□□ 0.22
PCDHGA3-202ENST00000612467 TOMM22Q9NS69 142 aa16.45■□□□□ 0.22
PCDHGA3-202ENST00000612467 MARCKSP29966 332 aaPredicted RBP16.45■□□□□ 0.22
PCDHGA3-202ENST00000612467 NDUFA8P51970 172 aa16.45■□□□□ 0.22
PCDHGA3-202ENST00000612467 UBE3CQ15386 1083 aa16.45■□□□□ 0.22
PCDHGA3-202ENST00000612467 SH2B2O14492 632 aaPredicted RBP16.44■□□□□ 0.22
PCDHGA3-202ENST00000612467 ADGRA1Q86SQ6 560 aa16.44■□□□□ 0.22
PCDHGA3-202ENST00000612467 DRC7Q8IY82 874 aa16.44■□□□□ 0.22
PCDHGA3-202ENST00000612467 IFNL3Q8IZI9 196 aa16.44■□□□□ 0.22
PCDHGA3-202ENST00000612467 ENGASEQ8NFI3 743 aa16.44■□□□□ 0.22
PCDHGA3-202ENST00000612467 PIBF1Q8WXW3 757 aa16.44■□□□□ 0.22
PCDHGA3-202ENST00000612467 ZNF396Q96N95 335 aaPredicted RBP16.44■□□□□ 0.22
PCDHGA3-202ENST00000612467 ANGEL1Q9UNK9 670 aaKnown RBP16.44■□□□□ 0.22
PCDHGA3-202ENST00000612467 KIF3AQ9Y496 699 aa16.44■□□□□ 0.22
PCDHGA3-202ENST00000612467 SLC5A1P13866 664 aa16.44■□□□□ 0.22
PCDHGA3-202ENST00000612467 METAP2P50579 478 aaKnown RBP eCLIP16.44■□□□□ 0.22
PCDHGA3-202ENST00000612467 PIP4K2BP78356 416 aa16.44■□□□□ 0.22
PCDHGA3-202ENST00000612467 TTF1Q15361 905 aaPredicted RBP16.44■□□□□ 0.22
PCDHGA3-202ENST00000612467 CCDC73Q6ZRK6 1079 aa16.44■□□□□ 0.22
PCDHGA3-202ENST00000612467 CCDC186Q7Z3E2 898 aa16.44■□□□□ 0.22
PCDHGA3-202ENST00000612467 SLC51AQ86UW1 340 aa16.44■□□□□ 0.22
PCDHGA3-202ENST00000612467 MROH5Q6ZUA9 1318 aa16.43■□□□□ 0.22
PCDHGA3-202ENST00000612467 GYG1P46976 350 aa16.43■□□□□ 0.22
PCDHGA3-202ENST00000612467 STK38Q15208 465 aa16.43■□□□□ 0.22
PCDHGA3-202ENST00000612467 ISM2Q6H9L7 571 aa16.43■□□□□ 0.22
PCDHGA3-202ENST00000612467 ZSCAN25Q6NSZ9 544 aa16.43■□□□□ 0.22
PCDHGA3-202ENST00000612467 NFXL1Q6ZNB6 911 aa16.43■□□□□ 0.22
PCDHGA3-202ENST00000612467 ZSWIM5Q9P217 1185 aa16.43■□□□□ 0.22
PCDHGA3-202ENST00000612467 RANBP6O60518 1105 aaKnown RBP16.43■□□□□ 0.22
PCDHGA3-202ENST00000612467 NTSR2O95665 410 aa16.43■□□□□ 0.22
PCDHGA3-202ENST00000612467 CHRNDQ07001 517 aa16.43■□□□□ 0.22
PCDHGA3-202ENST00000612467 ARID5BQ14865 1188 aa16.43■□□□□ 0.22
PCDHGA3-202ENST00000612467 SF3A1Q15459 793 aaKnown RBP16.43■□□□□ 0.22
PCDHGA3-202ENST00000612467 FAM182BQ5T319 152 aa16.43■□□□□ 0.22
PCDHGA3-202ENST00000612467 APOA5Q6Q788 366 aa16.43■□□□□ 0.22
PCDHGA3-202ENST00000612467 LINC00301Q8NCQ3 95 aa16.43■□□□□ 0.22
PCDHGA3-202ENST00000612467 ARID3AQ99856 593 aa16.43■□□□□ 0.22
PCDHGA3-202ENST00000612467 BIN1O00499 593 aa16.42■□□□□ 0.22
PCDHGA3-202ENST00000612467 KINO60870 393 aaKnown RBP16.42■□□□□ 0.22
PCDHGA3-202ENST00000612467 MYSM1Q5VVJ2 828 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms