RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 RASGRF1Q13972 1273 aa13.27□□□□□ -0.29
TUBE1-210ENST00000604967 PRKG1Q13976 671 aa13.27□□□□□ -0.29
TUBE1-210ENST00000604967 DIXDC1Q155Q3 683 aa13.27□□□□□ -0.29
TUBE1-210ENST00000604967 NBPF12Q5TAG4 269 aaPredicted RBP13.27□□□□□ -0.29
TUBE1-210ENST00000604967 CCDC102BQ68D86 513 aa13.27□□□□□ -0.29
TUBE1-210ENST00000604967 PI16Q6UXB8 463 aa13.27□□□□□ -0.29
TUBE1-210ENST00000604967 ITPRIPQ8IWB1 547 aa13.27□□□□□ -0.29
TUBE1-210ENST00000604967 A0A1B0GUL7 405 aa13.26□□□□□ -0.29
TUBE1-210ENST00000604967 MAP2K2P36507 400 aa13.26□□□□□ -0.29
TUBE1-210ENST00000604967 RASA3Q14644 834 aa13.26□□□□□ -0.29
TUBE1-210ENST00000604967 LDLRAD1Q5T700 205 aa13.26□□□□□ -0.29
TUBE1-210ENST00000604967 APOBEC3FQ8IUX4 373 aaKnown RBP13.26□□□□□ -0.29
TUBE1-210ENST00000604967 XAGE2Q96GT9 111 aa13.26□□□□□ -0.29
TUBE1-210ENST00000604967 VEZTQ9HBM0 779 aa13.26□□□□□ -0.29
TUBE1-210ENST00000604967 ZNF157P51786 506 aaPredicted RBP13.25□□□□□ -0.29
TUBE1-210ENST00000604967 RBM5P52756 815 aaKnown RBP eCLIP13.25□□□□□ -0.29
TUBE1-210ENST00000604967 KIF23Q02241 960 aaPredicted RBP13.25□□□□□ -0.29
TUBE1-210ENST00000604967 CEP85Q6P2H3 762 aa13.25□□□□□ -0.29
TUBE1-210ENST00000604967 SIRT2Q8IXJ6 389 aa13.25□□□□□ -0.29
TUBE1-210ENST00000604967 FTSJ3Q8IY81 847 aaKnown RBP13.25□□□□□ -0.29
TUBE1-210ENST00000604967 CLMNQ96JQ2 1002 aa13.25□□□□□ -0.29
TUBE1-210ENST00000604967 ZDHHC15Q96MV8 337 aa13.25□□□□□ -0.29
TUBE1-210ENST00000604967 TMEM39BQ9GZU3 492 aa13.25□□□□□ -0.29
TUBE1-210ENST00000604967 RCAN3Q9UKA8 241 aa13.25□□□□□ -0.29
TUBE1-210ENST00000604967 MYH13Q9UKX3 1938 aa13.24□□□□□ -0.29
TUBE1-210ENST00000604967 TCP10L2B9ZVM9 353 aa13.24□□□□□ -0.29
TUBE1-210ENST00000604967 ZBTB22O15209 634 aa13.24□□□□□ -0.29
TUBE1-210ENST00000604967 FRAT2O75474 233 aaPredicted RBP13.24□□□□□ -0.29
TUBE1-210ENST00000604967 FKBP1BP68106 108 aa13.24□□□□□ -0.29
TUBE1-210ENST00000604967 HDLBPQ00341 1268 aaKnown RBP13.24□□□□□ -0.29
TUBE1-210ENST00000604967 MAP2K1Q02750 393 aaPredicted RBP13.24□□□□□ -0.29
TUBE1-210ENST00000604967 NOGQ13253 232 aa13.24□□□□□ -0.29
TUBE1-210ENST00000604967 TBC1D22AQ8WUA7 517 aa13.24□□□□□ -0.29
TUBE1-210ENST00000604967 CSRNP1Q96S65 589 aa13.24□□□□□ -0.29
TUBE1-210ENST00000604967 TLR7Q9NYK1 1049 aaKnown RBP13.24□□□□□ -0.29
TUBE1-210ENST00000604967 HDAC5Q9UQL6 1122 aa13.24□□□□□ -0.29
TUBE1-210ENST00000604967 COG6Q9Y2V7 657 aa13.24□□□□□ -0.29
TUBE1-210ENST00000604967 NOP58Q9Y2X3 529 aaKnown RBP13.24□□□□□ -0.29
TUBE1-210ENST00000604967 DAGLAQ9Y4D2 1042 aa13.24□□□□□ -0.29
TUBE1-210ENST00000604967 SALL1Q9NSC2 1324 aa13.23□□□□□ -0.29
TUBE1-210ENST00000604967 USP2O75604 605 aaPredicted RBP13.23□□□□□ -0.29
TUBE1-210ENST00000604967 GJA5P36382 358 aa13.23□□□□□ -0.29
TUBE1-210ENST00000604967 CTCFP49711 727 aaPredicted RBP13.23□□□□□ -0.29
TUBE1-210ENST00000604967 MAP3K11Q16584 847 aa13.23□□□□□ -0.29
TUBE1-210ENST00000604967 IFFO2Q5TF58 517 aa13.23□□□□□ -0.29
TUBE1-210ENST00000604967 MRIQ9BWK5 157 aa13.23□□□□□ -0.29
TUBE1-210ENST00000604967 HMG20BQ9P0W2 317 aa13.23□□□□□ -0.29
TUBE1-210ENST00000604967 OTOFQ9HC10 1997 aa13.22□□□□□ -0.29
TUBE1-210ENST00000604967 SLURP2P0DP57 97 aa13.22□□□□□ -0.29
TUBE1-210ENST00000604967 MCAMP43121 646 aa13.22□□□□□ -0.29
TUBE1-210ENST00000604967 NFIAQ12857 509 aa13.22□□□□□ -0.29
TUBE1-210ENST00000604967 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
TUBE1-210ENST00000604967 MVPQ14764 893 aaKnown RBP13.22□□□□□ -0.29
TUBE1-210ENST00000604967 HHIPL2Q6UWX4 724 aa13.22□□□□□ -0.29
TUBE1-210ENST00000604967 TBC1D9Q6ZT07 1266 aa13.22□□□□□ -0.29
TUBE1-210ENST00000604967 ZFPM1Q8IX07 1006 aa13.22□□□□□ -0.29
TUBE1-210ENST00000604967 WDR66Q8TBY9 1149 aa13.22□□□□□ -0.29
TUBE1-210ENST00000604967 TEKT1Q969V4 418 aa13.22□□□□□ -0.29
TUBE1-210ENST00000604967 CCDC102AQ96A19 550 aa13.22□□□□□ -0.29
TUBE1-210ENST00000604967 DBNDD2Q9BQY9 259 aa13.22□□□□□ -0.29
TUBE1-210ENST00000604967 PRDM10Q9NQV6 1147 aa13.22□□□□□ -0.29
TUBE1-210ENST00000604967 ZBTB40Q9NUA8 1239 aa13.22□□□□□ -0.29
TUBE1-210ENST00000604967 ANGEL1Q9UNK9 670 aaKnown RBP13.22□□□□□ -0.29
TUBE1-210ENST00000604967 SUGT1Q9Y2Z0 365 aa13.22□□□□□ -0.29
TUBE1-210ENST00000604967 SURF6O75683 361 aaKnown RBP13.21□□□□□ -0.29
TUBE1-210ENST00000604967 G3BP1Q13283 466 aaKnown RBP eCLIP13.21□□□□□ -0.29
TUBE1-210ENST00000604967 TNNI3KQ59H18 835 aa13.21□□□□□ -0.29
TUBE1-210ENST00000604967 CDC42EP5Q6NZY7 148 aa13.21□□□□□ -0.29
TUBE1-210ENST00000604967 EAF2Q96CJ1 260 aaPredicted RBP13.21□□□□□ -0.29
TUBE1-210ENST00000604967 NEUROD6Q96NK8 337 aa13.21□□□□□ -0.29
TUBE1-210ENST00000604967 RNF186Q9NXI6 227 aa13.21□□□□□ -0.29
TUBE1-210ENST00000604967 DENND2AQ9ULE3 1009 aa13.21□□□□□ -0.29
TUBE1-210ENST00000604967 PPP2R3BQ9Y5P8 575 aa13.21□□□□□ -0.29
TUBE1-210ENST00000604967 FPGT-TNNI3KV9GXZ4 949 aa13.21□□□□□ -0.29
TUBE1-210ENST00000604967 RFX7Q2KHR2 1363 aa13.2□□□□□ -0.3
TUBE1-210ENST00000604967 PDS5AQ29RF7 1337 aaKnown RBP13.2□□□□□ -0.3
TUBE1-210ENST00000604967 ARID4AP29374 1257 aaPredicted RBP13.2□□□□□ -0.3
TUBE1-210ENST00000604967 TTLL12Q14166 644 aaPredicted RBP13.2□□□□□ -0.3
TUBE1-210ENST00000604967 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
TUBE1-210ENST00000604967 AIDAQ96BJ3 306 aa13.2□□□□□ -0.3
TUBE1-210ENST00000604967 R3HDMLQ9H3Y0 253 aa13.2□□□□□ -0.3
TUBE1-210ENST00000604967 FAM198AQ9UFP1 575 aa13.2□□□□□ -0.3
TUBE1-210ENST00000604967 DBNLQ9UJU6 430 aaKnown RBP13.2□□□□□ -0.3
TUBE1-210ENST00000604967 EXOC6BQ9Y2D4 811 aa13.2□□□□□ -0.3
TUBE1-210ENST00000604967 AKAP2Q9Y2D5 859 aa13.2□□□□□ -0.3
TUBE1-210ENST00000604967 AKAP11Q9UKA4 1901 aa13.19□□□□□ -0.3
TUBE1-210ENST00000604967 GAKO14976 1311 aa13.19□□□□□ -0.3
TUBE1-210ENST00000604967 SEMA3EO15041 775 aa13.19□□□□□ -0.3
TUBE1-210ENST00000604967 MYO1BO43795 1136 aa13.19□□□□□ -0.3
TUBE1-210ENST00000604967 LDHBP07195 334 aaKnown RBP13.19□□□□□ -0.3
TUBE1-210ENST00000604967 SPRYD7Q5W111 196 aa13.19□□□□□ -0.3
TUBE1-210ENST00000604967 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.19□□□□□ -0.3
TUBE1-210ENST00000604967 TNS4Q8IZW8 715 aa13.19□□□□□ -0.3
TUBE1-210ENST00000604967 SNRKQ9NRH2 765 aa13.19□□□□□ -0.3
TUBE1-210ENST00000604967 ATRNL1Q5VV63 1379 aa13.19□□□□□ -0.3
TUBE1-210ENST00000604967 TRPA1O75762 1119 aa13.18□□□□□ -0.3
TUBE1-210ENST00000604967 MECOMQ03112 1051 aa13.18□□□□□ -0.3
TUBE1-210ENST00000604967 SH3BP5LQ7L8J4 393 aa13.18□□□□□ -0.3
TUBE1-210ENST00000604967 SPATA5Q8NB90 893 aa13.18□□□□□ -0.3
TUBE1-210ENST00000604967 CCDC8Q9H0W5 538 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms