RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 SPDYE2Q495Y8 402 aa22.52■■□□□ 1.2
CCDC12-208ENST00000603885 DZIP1LQ8IYY4 767 aaKnown RBP22.52■■□□□ 1.2
CCDC12-208ENST00000603885 GNAI2P04899 355 aa22.51■■□□□ 1.19
CCDC12-208ENST00000603885 HDLBPQ00341 1268 aaKnown RBP22.51■■□□□ 1.19
CCDC12-208ENST00000603885 GRIK5Q16478 980 aa22.51■■□□□ 1.19
CCDC12-208ENST00000603885 SUPT20HL1Q3ZLR7 823 aa22.51■■□□□ 1.19
CCDC12-208ENST00000603885 SAGE1Q9NXZ1 904 aa22.51■■□□□ 1.19
CCDC12-208ENST00000603885 ZNF70Q9UC06 446 aaPredicted RBP22.51■■□□□ 1.19
CCDC12-208ENST00000603885 ANGEL1Q9UNK9 670 aaKnown RBP22.51■■□□□ 1.19
CCDC12-208ENST00000603885 SUGT1Q9Y2Z0 365 aa22.51■■□□□ 1.19
CCDC12-208ENST00000603885 RASA3Q14644 834 aa22.5■■□□□ 1.19
CCDC12-208ENST00000603885 WDR66Q8TBY9 1149 aa22.5■■□□□ 1.19
CCDC12-208ENST00000603885 TEKT1Q969V4 418 aa22.5■■□□□ 1.19
CCDC12-208ENST00000603885 CSRNP1Q96S65 589 aa22.5■■□□□ 1.19
CCDC12-208ENST00000603885 TDRD3Q9H7E2 651 aaKnown RBP22.5■■□□□ 1.19
CCDC12-208ENST00000603885 GNL3LQ9NVN8 582 aaKnown RBP22.5■■□□□ 1.19
CCDC12-208ENST00000603885 MYH13Q9UKX3 1938 aa22.5■■□□□ 1.19
CCDC12-208ENST00000603885 MAST3O60307 1309 aa22.5■■□□□ 1.19
CCDC12-208ENST00000603885 PPP1R12BO60237 982 aaPredicted RBP22.49■■□□□ 1.19
CCDC12-208ENST00000603885 TMEM57Q8N5G2 664 aa22.49■■□□□ 1.19
CCDC12-208ENST00000603885 SSC5DA1L4H1 1573 aa22.49■■□□□ 1.19
CCDC12-208ENST00000603885 AKAP11Q9UKA4 1901 aa22.49■■□□□ 1.19
CCDC12-208ENST00000603885 LDLRAD1Q5T700 205 aa22.48■■□□□ 1.19
CCDC12-208ENST00000603885 RNF186Q9NXI6 227 aa22.48■■□□□ 1.19
CCDC12-208ENST00000603885 MAP3K11Q16584 847 aa22.47■■□□□ 1.19
CCDC12-208ENST00000603885 NBPF12Q5TAG4 269 aaPredicted RBP22.47■■□□□ 1.19
CCDC12-208ENST00000603885 FTSJ3Q8IY81 847 aaKnown RBP22.47■■□□□ 1.19
CCDC12-208ENST00000603885 MRIQ9BWK5 157 aa22.47■■□□□ 1.19
CCDC12-208ENST00000603885 FZD1Q9UP38 647 aa22.47■■□□□ 1.19
CCDC12-208ENST00000603885 TRPA1O75762 1119 aa22.46■■□□□ 1.19
CCDC12-208ENST00000603885 TNNI2P48788 182 aa22.46■■□□□ 1.19
CCDC12-208ENST00000603885 ZDHHC15Q96MV8 337 aa22.46■■□□□ 1.19
CCDC12-208ENST00000603885 TCP10L2B9ZVM9 353 aa22.45■■□□□ 1.18
CCDC12-208ENST00000603885 SEMA3EO15041 775 aa22.45■■□□□ 1.18
CCDC12-208ENST00000603885 AKAP2Q9Y2D5 859 aa22.45■■□□□ 1.18
CCDC12-208ENST00000603885 UNCXA6NJT0 531 aa22.44■■□□□ 1.18
CCDC12-208ENST00000603885 PHKA1P46020 1223 aa22.44■■□□□ 1.18
CCDC12-208ENST00000603885 IREB2P48200 963 aaKnown RBP22.44■■□□□ 1.18
CCDC12-208ENST00000603885 MKRN3Q13064 507 aaKnown RBP22.44■■□□□ 1.18
CCDC12-208ENST00000603885 HHIPL2Q6UWX4 724 aa22.44■■□□□ 1.18
CCDC12-208ENST00000603885 TMOD2Q9NZR1 351 aa22.44■■□□□ 1.18
CCDC12-208ENST00000603885 CASP8AP2Q9UKL3 1982 aa22.44■■□□□ 1.18
CCDC12-208ENST00000603885 DENND2AQ9ULE3 1009 aa22.44■■□□□ 1.18
CCDC12-208ENST00000603885 ADORA1P30542 326 aa22.43■■□□□ 1.18
CCDC12-208ENST00000603885 TFCP2Q12800 502 aa22.43■■□□□ 1.18
CCDC12-208ENST00000603885 CCDC102BQ68D86 513 aa22.43■■□□□ 1.18
CCDC12-208ENST00000603885 SLC10A4Q96EP9 437 aa22.43■■□□□ 1.18
CCDC12-208ENST00000603885 PNMA6EA0A0J9YXQ4 647 aa22.42■■□□□ 1.18
CCDC12-208ENST00000603885 A0A1B0GUL7 405 aa22.42■■□□□ 1.18
CCDC12-208ENST00000603885 ZBTB22O15209 634 aa22.42■■□□□ 1.18
CCDC12-208ENST00000603885 TIMM10P62072 90 aa22.42■■□□□ 1.18
CCDC12-208ENST00000603885 SREBF2Q12772 1141 aa22.42■■□□□ 1.18
CCDC12-208ENST00000603885 SPRYD7Q5W111 196 aa22.42■■□□□ 1.18
CCDC12-208ENST00000603885 APOBEC3HQ6NTF7 200 aaKnown RBP22.42■■□□□ 1.18
CCDC12-208ENST00000603885 TMEM39BQ9GZU3 492 aa22.42■■□□□ 1.18
CCDC12-208ENST00000603885 SALL1Q9NSC2 1324 aa22.41■■□□□ 1.18
CCDC12-208ENST00000603885 USP2O75604 605 aaPredicted RBP22.41■■□□□ 1.18
CCDC12-208ENST00000603885 LDHBP07195 334 aaKnown RBP22.41■■□□□ 1.18
CCDC12-208ENST00000603885 PRDX5P30044 214 aa22.41■■□□□ 1.18
CCDC12-208ENST00000603885 TM4SF4P48230 202 aa22.41■■□□□ 1.18
CCDC12-208ENST00000603885 CACNB3P54284 484 aa22.41■■□□□ 1.18
CCDC12-208ENST00000603885 G3BP1Q13283 466 aaKnown RBP eCLIP22.41■■□□□ 1.18
CCDC12-208ENST00000603885 ITPRIPQ8IWB1 547 aa22.41■■□□□ 1.18
CCDC12-208ENST00000603885 CLMNQ96JQ2 1002 aa22.41■■□□□ 1.18
CCDC12-208ENST00000603885 TEPSINQ96N21 525 aa22.41■■□□□ 1.18
CCDC12-208ENST00000603885 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.41■■□□□ 1.18
CCDC12-208ENST00000603885 MVPQ14764 893 aaKnown RBP22.4■■□□□ 1.18
CCDC12-208ENST00000603885 FKBP1CQ5VVH2 108 aa22.4■■□□□ 1.18
CCDC12-208ENST00000603885 ANKRD13AQ8IZ07 590 aa22.4■■□□□ 1.18
CCDC12-208ENST00000603885 XAGE2Q96GT9 111 aa22.4■■□□□ 1.18
CCDC12-208ENST00000603885 ABHD8Q96I13 439 aa22.4■■□□□ 1.18
CCDC12-208ENST00000603885 ZBTB48P10074 688 aaPredicted RBP22.39■■□□□ 1.17
CCDC12-208ENST00000603885 RLBP1P12271 317 aa22.39■■□□□ 1.17
CCDC12-208ENST00000603885 FAM83AQ86UY5 434 aa22.39■■□□□ 1.17
CCDC12-208ENST00000603885 CDAN1Q8IWY9 1227 aa22.39■■□□□ 1.17
CCDC12-208ENST00000603885 ZGPATQ8N5A5 531 aaKnown RBP22.39■■□□□ 1.17
CCDC12-208ENST00000603885 PDS5AQ29RF7 1337 aaKnown RBP22.38■■□□□ 1.17
CCDC12-208ENST00000603885 RASGRF1Q13972 1273 aa22.38■■□□□ 1.17
CCDC12-208ENST00000603885 DIXDC1Q155Q3 683 aa22.38■■□□□ 1.17
CCDC12-208ENST00000603885 WNK4Q96J92 1243 aa22.38■■□□□ 1.17
CCDC12-208ENST00000603885 NEUROD6Q96NK8 337 aa22.38■■□□□ 1.17
CCDC12-208ENST00000603885 DAGLAQ9Y4D2 1042 aa22.38■■□□□ 1.17
CCDC12-208ENST00000603885 MANSC4A6NHS7 340 aaPredicted RBP22.37■■□□□ 1.17
CCDC12-208ENST00000603885 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.37■■□□□ 1.17
CCDC12-208ENST00000603885 ZBTB7BO15156 539 aaPredicted RBP22.36■■□□□ 1.17
CCDC12-208ENST00000603885 INHBEP58166 350 aa22.36■■□□□ 1.17
CCDC12-208ENST00000603885 ATP8B2P98198 1209 aa22.36■■□□□ 1.17
CCDC12-208ENST00000603885 DGKZQ13574 1117 aa22.36■■□□□ 1.17
CCDC12-208ENST00000603885 POLA2Q14181 598 aa22.36■■□□□ 1.17
CCDC12-208ENST00000603885 GORABQ5T7V8 394 aa22.36■■□□□ 1.17
CCDC12-208ENST00000603885 SSH3Q8TE77 659 aa22.36■■□□□ 1.17
CCDC12-208ENST00000603885 HOOK2Q96ED9 719 aa22.36■■□□□ 1.17
CCDC12-208ENST00000603885 MCOLN1Q9GZU1 580 aa22.36■■□□□ 1.17
CCDC12-208ENST00000603885 C1orf115Q9H7X2 142 aa22.36■■□□□ 1.17
CCDC12-208ENST00000603885 OTOFQ9HC10 1997 aa22.36■■□□□ 1.17
CCDC12-208ENST00000603885 ABCF2Q9UG63 623 aa22.35■■□□□ 1.17
CCDC12-208ENST00000603885 RPAP1Q9BWH6 1393 aaPredicted RBP22.35■■□□□ 1.17
CCDC12-208ENST00000603885 TBC1D8O95759 1140 aa22.34■■□□□ 1.17
CCDC12-208ENST00000603885 OS9Q13438 667 aaPredicted RBP22.34■■□□□ 1.17
CCDC12-208ENST00000603885 SPTY2D1Q68D10 685 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms