RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 WNT10BO00744 389 aa16.94■□□□□ 0.3
RNF40-212ENST00000602784 PRDX5P30044 214 aa16.94■□□□□ 0.3
RNF40-212ENST00000602784 NUCB1Q02818 461 aa16.94■□□□□ 0.3
RNF40-212ENST00000602784 HHIPL2Q6UWX4 724 aa16.94■□□□□ 0.3
RNF40-212ENST00000602784 TEKT1Q969V4 418 aa16.94■□□□□ 0.3
RNF40-212ENST00000602784 GPATCH3Q96I76 525 aa16.94■□□□□ 0.3
RNF40-212ENST00000602784 SNRKQ9NRH2 765 aa16.94■□□□□ 0.3
RNF40-212ENST00000602784 ECHDC1Q9NTX5 307 aa16.94■□□□□ 0.3
RNF40-212ENST00000602784 ABCF2Q9UG63 623 aa16.94■□□□□ 0.3
RNF40-212ENST00000602784 SPDYE2BA6NHP3 402 aa16.93■□□□□ 0.3
RNF40-212ENST00000602784 CYP2E1P05181 493 aaPredicted RBP16.93■□□□□ 0.3
RNF40-212ENST00000602784 SPDYE6P0CI01 402 aa16.93■□□□□ 0.3
RNF40-212ENST00000602784 ZAP70P43403 619 aa16.93■□□□□ 0.3
RNF40-212ENST00000602784 CRKP46108 304 aa16.93■□□□□ 0.3
RNF40-212ENST00000602784 CFAP100Q494V2 611 aa16.93■□□□□ 0.3
RNF40-212ENST00000602784 ERICH6Q7L0X2 663 aa16.93■□□□□ 0.3
RNF40-212ENST00000602784 ZDHHC15Q96MV8 337 aa16.93■□□□□ 0.3
RNF40-212ENST00000602784 BCL11AQ9H165 835 aa16.93■□□□□ 0.3
RNF40-212ENST00000602784 TTC41PQ6P2S7 1318 aa16.93■□□□□ 0.3
RNF40-212ENST00000602784 PITPNM2Q9BZ72 1349 aa16.93■□□□□ 0.3
RNF40-212ENST00000602784 TTF1Q15361 905 aaPredicted RBP16.92■□□□□ 0.3
RNF40-212ENST00000602784 NBPF9Q3BBW0 867 aa16.92■□□□□ 0.3
RNF40-212ENST00000602784 ERICH6BQ5W0A0 696 aa16.92■□□□□ 0.3
RNF40-212ENST00000602784 TMED8Q6PL24 325 aaPredicted RBP16.92■□□□□ 0.3
RNF40-212ENST00000602784 TBC1D9Q6ZT07 1266 aa16.92■□□□□ 0.3
RNF40-212ENST00000602784 CHD1LQ86WJ1 897 aa16.92■□□□□ 0.3
RNF40-212ENST00000602784 SLF2Q8IX21 1173 aa16.92■□□□□ 0.3
RNF40-212ENST00000602784 CNTROBQ8N137 903 aa16.92■□□□□ 0.3
RNF40-212ENST00000602784 FAM163AQ96GL9 167 aaPredicted RBP16.92■□□□□ 0.3
RNF40-212ENST00000602784 LRP2BPQ9P2M1 347 aa16.92■□□□□ 0.3
RNF40-212ENST00000602784 MYO1BO43795 1136 aa16.91■□□□□ 0.3
RNF40-212ENST00000602784 ITGBL1O95965 494 aaPredicted RBP16.91■□□□□ 0.3
RNF40-212ENST00000602784 RBM5P52756 815 aaKnown RBP eCLIP16.91■□□□□ 0.3
RNF40-212ENST00000602784 DZIP1Q86YF9 867 aaKnown RBP16.91■□□□□ 0.3
RNF40-212ENST00000602784 DCPSQ96C86 337 aaKnown RBP16.91■□□□□ 0.3
RNF40-212ENST00000602784 PRMT6Q96LA8 375 aaPredicted RBP16.91■□□□□ 0.3
RNF40-212ENST00000602784 HAUS7Q99871 368 aa16.91■□□□□ 0.3
RNF40-212ENST00000602784 SALL3Q9BXA9 1300 aa16.91■□□□□ 0.3
RNF40-212ENST00000602784 MX1P20591 662 aa16.9■□□□□ 0.3
RNF40-212ENST00000602784 C1QTNF8P60827 252 aa16.9■□□□□ 0.3
RNF40-212ENST00000602784 GSTO1P78417 241 aa16.9■□□□□ 0.3
RNF40-212ENST00000602784 MECOMQ03112 1051 aa16.9■□□□□ 0.3
RNF40-212ENST00000602784 MAP1SQ66K74 1059 aaPredicted RBP16.9■□□□□ 0.3
RNF40-212ENST00000602784 B4GALNT3Q6L9W6 998 aa16.9■□□□□ 0.3
RNF40-212ENST00000602784 CDC37L1Q7L3B6 337 aa16.9■□□□□ 0.3
RNF40-212ENST00000602784 NSUN4Q96CB9 384 aaKnown RBP16.9■□□□□ 0.3
RNF40-212ENST00000602784 STAP2Q9UGK3 403 aa16.9■□□□□ 0.3
RNF40-212ENST00000602784 ERC2O15083 957 aa16.89■□□□□ 0.29
RNF40-212ENST00000602784 LDHCP07864 332 aa16.89■□□□□ 0.29
RNF40-212ENST00000602784 DIXDC1Q155Q3 683 aa16.89■□□□□ 0.29
RNF40-212ENST00000602784 ANGEL2Q5VTE6 544 aaKnown RBP16.89■□□□□ 0.29
RNF40-212ENST00000602784 APOBEC3HQ6NTF7 200 aaKnown RBP16.89■□□□□ 0.29
RNF40-212ENST00000602784 LNPKQ9C0E8 428 aa16.89■□□□□ 0.29
RNF40-212ENST00000602784 BOLA2Q9H3K6 86 aa16.89■□□□□ 0.29
RNF40-212ENST00000602784 PIH1D3Q9NQM4 214 aaKnown RBP16.89■□□□□ 0.29
RNF40-212ENST00000602784 GGA3Q9NZ52 723 aa16.89■□□□□ 0.29
RNF40-212ENST00000602784 RAI14Q9P0K7 980 aa16.89■□□□□ 0.29
RNF40-212ENST00000602784 PCDHAC2Q9Y5I4 1007 aa16.89■□□□□ 0.29
RNF40-212ENST00000602784 GAKO14976 1311 aa16.89■□□□□ 0.29
RNF40-212ENST00000602784 GLRX3O76003 335 aaKnown RBP16.88■□□□□ 0.29
RNF40-212ENST00000602784 KRT26Q7Z3Y9 468 aa16.88■□□□□ 0.29
RNF40-212ENST00000602784 APOBEC3FQ8IUX4 373 aaKnown RBP16.88■□□□□ 0.29
RNF40-212ENST00000602784 SULF1Q8IWU6 871 aa16.88■□□□□ 0.29
RNF40-212ENST00000602784 OTUD7AQ8TE49 926 aaPredicted RBP16.88■□□□□ 0.29
RNF40-212ENST00000602784 ZNF384Q8TF68 577 aa16.88■□□□□ 0.29
RNF40-212ENST00000602784 PAG1Q9NWQ8 432 aa16.88■□□□□ 0.29
RNF40-212ENST00000602784 DAGLAQ9Y4D2 1042 aa16.88■□□□□ 0.29
RNF40-212ENST00000602784 ASTN2O75129 1339 aaPredicted RBP16.88■□□□□ 0.29
RNF40-212ENST00000602784 PDE1AP54750 535 aa16.87■□□□□ 0.29
RNF40-212ENST00000602784 MAP3K12Q12852 859 aa16.87■□□□□ 0.29
RNF40-212ENST00000602784 SPDYE2Q495Y8 402 aa16.87■□□□□ 0.29
RNF40-212ENST00000602784 PI4K2BQ8TCG2 481 aa16.87■□□□□ 0.29
RNF40-212ENST00000602784 DNAJC2Q99543 621 aaKnown RBP16.87■□□□□ 0.29
RNF40-212ENST00000602784 ANTXR1Q9H6X2 564 aa16.87■□□□□ 0.29
RNF40-212ENST00000602784 NDUFB9Q9Y6M9 179 aa16.87■□□□□ 0.29
RNF40-212ENST00000602784 PASKQ96RG2 1323 aa16.87■□□□□ 0.29
RNF40-212ENST00000602784 ECM29Q5VYK3 1845 aa16.86■□□□□ 0.29
RNF40-212ENST00000602784 POLR2AP24928 1970 aaKnown RBP16.86■□□□□ 0.29
RNF40-212ENST00000602784 GPR75-ASB3A0A0A6YYF3 556 aa16.86■□□□□ 0.29
RNF40-212ENST00000602784 GOLIM4O00461 696 aa16.86■□□□□ 0.29
RNF40-212ENST00000602784 IDH1O75874 414 aaKnown RBP16.86■□□□□ 0.29
RNF40-212ENST00000602784 MAP4K4O95819 1239 aaPredicted RBP16.86■□□□□ 0.29
RNF40-212ENST00000602784 FKBP1CQ5VVH2 108 aa16.86■□□□□ 0.29
RNF40-212ENST00000602784 NAA16Q6N069 864 aaPredicted RBP16.86■□□□□ 0.29
RNF40-212ENST00000602784 CENPQQ7L2Z9 268 aaPredicted RBP16.86■□□□□ 0.29
RNF40-212ENST00000602784 USP48Q86UV5 1035 aa16.86■□□□□ 0.29
RNF40-212ENST00000602784 GLIS2Q9BZE0 524 aaPredicted RBP16.86■□□□□ 0.29
RNF40-212ENST00000602784 TDRD3Q9H7E2 651 aaKnown RBP16.86■□□□□ 0.29
RNF40-212ENST00000602784 ZNF70Q9UC06 446 aaPredicted RBP16.86■□□□□ 0.29
RNF40-212ENST00000602784 MROH7-TTC4A0A0A0MT08 1334 aa16.86■□□□□ 0.29
RNF40-212ENST00000602784 AOX1Q06278 1338 aa16.86■□□□□ 0.29
RNF40-212ENST00000602784 MYH2Q9UKX2 1941 aa16.86■□□□□ 0.29
RNF40-212ENST00000602784 TNFAIP1Q13829 316 aa16.85■□□□□ 0.29
RNF40-212ENST00000602784 OSBPL3Q9H4L5 887 aa16.85■□□□□ 0.29
RNF40-212ENST00000602784 PPP2R3BQ9Y5P8 575 aa16.85■□□□□ 0.29
RNF40-212ENST00000602784 DOCK2Q92608 1830 aa16.84■□□□□ 0.29
RNF40-212ENST00000602784 CLRN2A0PK11 232 aa16.84■□□□□ 0.29
RNF40-212ENST00000602784 TSHZ3Q63HK5 1081 aa16.84■□□□□ 0.29
RNF40-212ENST00000602784 CDC42EP5Q6NZY7 148 aa16.84■□□□□ 0.29
RNF40-212ENST00000602784 PLEKHM2Q8IWE5 1019 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms