RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 GNAI2P04899 355 aa32.38■■■□□ 2.77
PNKP-216ENST00000601816 HDLBPQ00341 1268 aaKnown RBP32.38■■■□□ 2.77
PNKP-216ENST00000601816 MTX1Q13505 466 aa32.38■■■□□ 2.77
PNKP-216ENST00000601816 TDRD3Q9H7E2 651 aaKnown RBP32.38■■■□□ 2.77
PNKP-216ENST00000601816 ZNF70Q9UC06 446 aaPredicted RBP32.38■■■□□ 2.77
PNKP-216ENST00000601816 ANGEL1Q9UNK9 670 aaKnown RBP32.38■■■□□ 2.77
PNKP-216ENST00000601816 TNFAIP1Q13829 316 aa32.37■■■□□ 2.77
PNKP-216ENST00000601816 REM2Q8IYK8 340 aaPredicted RBP32.37■■■□□ 2.77
PNKP-216ENST00000601816 SUGT1Q9Y2Z0 365 aa32.37■■■□□ 2.77
PNKP-216ENST00000601816 RASA3Q14644 834 aa32.36■■■□□ 2.77
PNKP-216ENST00000601816 SUPT20HL1Q3ZLR7 823 aa32.36■■■□□ 2.77
PNKP-216ENST00000601816 TMEM57Q8N5G2 664 aa32.36■■■□□ 2.77
PNKP-216ENST00000601816 TEKT1Q969V4 418 aa32.36■■■□□ 2.77
PNKP-216ENST00000601816 CSRNP1Q96S65 589 aa32.36■■■□□ 2.77
PNKP-216ENST00000601816 SAGE1Q9NXZ1 904 aa32.36■■■□□ 2.77
PNKP-216ENST00000601816 MAST3O60307 1309 aa32.35■■■□□ 2.77
PNKP-216ENST00000601816 WDR66Q8TBY9 1149 aa32.35■■■□□ 2.77
PNKP-216ENST00000601816 GNL3LQ9NVN8 582 aaKnown RBP32.35■■■□□ 2.77
PNKP-216ENST00000601816 SSC5DA1L4H1 1573 aa32.35■■■□□ 2.77
PNKP-216ENST00000601816 PPP1R12BO60237 982 aaPredicted RBP32.34■■■□□ 2.77
PNKP-216ENST00000601816 LDLRAD1Q5T700 205 aa32.34■■■□□ 2.77
PNKP-216ENST00000601816 NBPF12Q5TAG4 269 aaPredicted RBP32.33■■■□□ 2.77
PNKP-216ENST00000601816 RNF186Q9NXI6 227 aa32.33■■■□□ 2.77
PNKP-216ENST00000601816 FZD1Q9UP38 647 aa32.33■■■□□ 2.77
PNKP-216ENST00000601816 FTSJ3Q8IY81 847 aaKnown RBP32.32■■■□□ 2.76
PNKP-216ENST00000601816 MYH13Q9UKX3 1938 aa32.32■■■□□ 2.76
PNKP-216ENST00000601816 MAP3K11Q16584 847 aa32.31■■■□□ 2.76
PNKP-216ENST00000601816 MRIQ9BWK5 157 aa32.31■■■□□ 2.76
PNKP-216ENST00000601816 TCP10L2B9ZVM9 353 aa32.3■■■□□ 2.76
PNKP-216ENST00000601816 TRPA1O75762 1119 aa32.3■■■□□ 2.76
PNKP-216ENST00000601816 PHKA1P46020 1223 aa32.3■■■□□ 2.76
PNKP-216ENST00000601816 TNNI2P48788 182 aa32.3■■■□□ 2.76
PNKP-216ENST00000601816 ZDHHC15Q96MV8 337 aa32.3■■■□□ 2.76
PNKP-216ENST00000601816 SEMA3EO15041 775 aa32.29■■■□□ 2.76
PNKP-216ENST00000601816 ADORA1P30542 326 aa32.28■■■□□ 2.76
PNKP-216ENST00000601816 MKRN3Q13064 507 aaKnown RBP32.28■■■□□ 2.76
PNKP-216ENST00000601816 DENND2AQ9ULE3 1009 aa32.28■■■□□ 2.76
PNKP-216ENST00000601816 AKAP2Q9Y2D5 859 aa32.28■■■□□ 2.76
PNKP-216ENST00000601816 AKAP11Q9UKA4 1901 aa32.28■■■□□ 2.76
PNKP-216ENST00000601816 PNMA6EA0A0J9YXQ4 647 aa32.27■■■□□ 2.76
PNKP-216ENST00000601816 TFCP2Q12800 502 aa32.27■■■□□ 2.76
PNKP-216ENST00000601816 HHIPL2Q6UWX4 724 aa32.27■■■□□ 2.76
PNKP-216ENST00000601816 TMOD2Q9NZR1 351 aa32.27■■■□□ 2.76
PNKP-216ENST00000601816 IREB2P48200 963 aaKnown RBP32.26■■■□□ 2.75
PNKP-216ENST00000601816 TIMM10P62072 90 aa32.26■■■□□ 2.75
PNKP-216ENST00000601816 CCDC102BQ68D86 513 aa32.26■■■□□ 2.75
PNKP-216ENST00000601816 SLC10A4Q96EP9 437 aa32.26■■■□□ 2.75
PNKP-216ENST00000601816 A0A1B0GUL7 405 aa32.25■■■□□ 2.75
PNKP-216ENST00000601816 UNCXA6NJT0 531 aa32.25■■■□□ 2.75
PNKP-216ENST00000601816 SPRYD7Q5W111 196 aa32.25■■■□□ 2.75
PNKP-216ENST00000601816 APOBEC3HQ6NTF7 200 aaKnown RBP32.25■■■□□ 2.75
PNKP-216ENST00000601816 ZBTB4Q9P1Z0 1013 aaPredicted RBP32.25■■■□□ 2.75
PNKP-216ENST00000601816 CACNB3P54284 484 aa32.24■■■□□ 2.75
PNKP-216ENST00000601816 SREBF2Q12772 1141 aa32.24■■■□□ 2.75
PNKP-216ENST00000601816 ITPRIPQ8IWB1 547 aa32.24■■■□□ 2.75
PNKP-216ENST00000601816 CLMNQ96JQ2 1002 aa32.24■■■□□ 2.75
PNKP-216ENST00000601816 TEPSINQ96N21 525 aa32.24■■■□□ 2.75
PNKP-216ENST00000601816 TMEM39BQ9GZU3 492 aa32.24■■■□□ 2.75
PNKP-216ENST00000601816 SALL1Q9NSC2 1324 aa32.24■■■□□ 2.75
PNKP-216ENST00000601816 ZBTB22O15209 634 aa32.23■■■□□ 2.75
PNKP-216ENST00000601816 USP2O75604 605 aaPredicted RBP32.23■■■□□ 2.75
PNKP-216ENST00000601816 PRDX5P30044 214 aa32.23■■■□□ 2.75
PNKP-216ENST00000601816 G3BP1Q13283 466 aaKnown RBP eCLIP32.23■■■□□ 2.75
PNKP-216ENST00000601816 CASP8AP2Q9UKL3 1982 aa32.22■■■□□ 2.75
PNKP-216ENST00000601816 LDHBP07195 334 aaKnown RBP32.22■■■□□ 2.75
PNKP-216ENST00000601816 RLBP1P12271 317 aa32.22■■■□□ 2.75
PNKP-216ENST00000601816 TM4SF4P48230 202 aa32.22■■■□□ 2.75
PNKP-216ENST00000601816 MVPQ14764 893 aaKnown RBP32.22■■■□□ 2.75
PNKP-216ENST00000601816 CDAN1Q8IWY9 1227 aa32.22■■■□□ 2.75
PNKP-216ENST00000601816 XAGE2Q96GT9 111 aa32.22■■■□□ 2.75
PNKP-216ENST00000601816 FKBP1CQ5VVH2 108 aa32.21■■■□□ 2.75
PNKP-216ENST00000601816 ANKRD13AQ8IZ07 590 aa32.21■■■□□ 2.75
PNKP-216ENST00000601816 ABHD8Q96I13 439 aa32.21■■■□□ 2.75
PNKP-216ENST00000601816 RASGRF1Q13972 1273 aa32.2■■■□□ 2.75
PNKP-216ENST00000601816 ZGPATQ8N5A5 531 aaKnown RBP32.2■■■□□ 2.75
PNKP-216ENST00000601816 WNK4Q96J92 1243 aa32.2■■■□□ 2.75
PNKP-216ENST00000601816 NEUROD6Q96NK8 337 aa32.2■■■□□ 2.75
PNKP-216ENST00000601816 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.2■■■□□ 2.75
PNKP-216ENST00000601816 ZBTB48P10074 688 aaPredicted RBP32.19■■■□□ 2.74
PNKP-216ENST00000601816 DIXDC1Q155Q3 683 aa32.19■■■□□ 2.74
PNKP-216ENST00000601816 FAM83AQ86UY5 434 aa32.19■■■□□ 2.74
PNKP-216ENST00000601816 C1orf115Q9H7X2 142 aa32.19■■■□□ 2.74
PNKP-216ENST00000601816 DAGLAQ9Y4D2 1042 aa32.19■■■□□ 2.74
PNKP-216ENST00000601816 PDS5AQ29RF7 1337 aaKnown RBP32.19■■■□□ 2.74
PNKP-216ENST00000601816 POLA2Q14181 598 aa32.18■■■□□ 2.74
PNKP-216ENST00000601816 MANSC4A6NHS7 340 aaPredicted RBP32.17■■■□□ 2.74
PNKP-216ENST00000601816 ZBTB7BO15156 539 aaPredicted RBP32.17■■■□□ 2.74
PNKP-216ENST00000601816 ATP8B2P98198 1209 aa32.17■■■□□ 2.74
PNKP-216ENST00000601816 GORABQ5T7V8 394 aa32.16■■■□□ 2.74
PNKP-216ENST00000601816 SSH3Q8TE77 659 aa32.16■■■□□ 2.74
PNKP-216ENST00000601816 DGKZQ13574 1117 aa32.15■■■□□ 2.74
PNKP-216ENST00000601816 MCOLN1Q9GZU1 580 aa32.15■■■□□ 2.74
PNKP-216ENST00000601816 TBC1D8O95759 1140 aa32.14■■■□□ 2.74
PNKP-216ENST00000601816 OS9Q13438 667 aaPredicted RBP32.14■■■□□ 2.74
PNKP-216ENST00000601816 CDC42EP5Q6NZY7 148 aa32.14■■■□□ 2.74
PNKP-216ENST00000601816 HOOK2Q96ED9 719 aa32.14■■■□□ 2.74
PNKP-216ENST00000601816 ABCF2Q9UG63 623 aa32.14■■■□□ 2.74
PNKP-216ENST00000601816 OTOFQ9HC10 1997 aa32.14■■■□□ 2.74
PNKP-216ENST00000601816 INHBEP58166 350 aa32.13■■■□□ 2.73
PNKP-216ENST00000601816 DZIP1Q86YF9 867 aaKnown RBP32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms