RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 UBE2Q2LH0YL09 131 aa20.83■□□□□ 0.93
NOTCH3-205ENST00000600841 SLC10A3P09131 477 aa20.83■□□□□ 0.93
NOTCH3-205ENST00000600841 ADORA1P30542 326 aa20.83■□□□□ 0.93
NOTCH3-205ENST00000600841 PHKA1P46020 1223 aa20.83■□□□□ 0.93
NOTCH3-205ENST00000600841 G3BP1Q13283 466 aaKnown RBP eCLIP20.83■□□□□ 0.93
NOTCH3-205ENST00000600841 TEKT1Q969V4 418 aa20.83■□□□□ 0.93
NOTCH3-205ENST00000600841 PRDM10Q9NQV6 1147 aa20.83■□□□□ 0.93
NOTCH3-205ENST00000600841 ZNF70Q9UC06 446 aaPredicted RBP20.83■□□□□ 0.93
NOTCH3-205ENST00000600841 SEMA3EO15041 775 aa20.82■□□□□ 0.92
NOTCH3-205ENST00000600841 ZBTB7BO15156 539 aaPredicted RBP20.82■□□□□ 0.92
NOTCH3-205ENST00000600841 HSPA8P11142 646 aaKnown RBP20.82■□□□□ 0.92
NOTCH3-205ENST00000600841 MS4A1P11836 297 aa20.82■□□□□ 0.92
NOTCH3-205ENST00000600841 LBX1P52954 281 aa20.82■□□□□ 0.92
NOTCH3-205ENST00000600841 TIMM10P62072 90 aa20.82■□□□□ 0.92
NOTCH3-205ENST00000600841 TNFAIP1Q13829 316 aa20.82■□□□□ 0.92
NOTCH3-205ENST00000600841 ARMC9Q7Z3E5 817 aa20.82■□□□□ 0.92
NOTCH3-205ENST00000600841 PANK1Q8TE04 598 aa20.82■□□□□ 0.92
NOTCH3-205ENST00000600841 ZIC5Q96T25 663 aa20.82■□□□□ 0.92
NOTCH3-205ENST00000600841 MRIQ9BWK5 157 aa20.82■□□□□ 0.92
NOTCH3-205ENST00000600841 TDRD3Q9H7E2 651 aaKnown RBP20.82■□□□□ 0.92
NOTCH3-205ENST00000600841 C1orf115Q9H7X2 142 aa20.82■□□□□ 0.92
NOTCH3-205ENST00000600841 DENND2AQ9ULE3 1009 aa20.82■□□□□ 0.92
NOTCH3-205ENST00000600841 A0A1B0GUL7 405 aa20.81■□□□□ 0.92
NOTCH3-205ENST00000600841 CA12O43570 354 aa20.81■□□□□ 0.92
NOTCH3-205ENST00000600841 ATP8B2P98198 1209 aa20.81■□□□□ 0.92
NOTCH3-205ENST00000600841 PRKG1Q13976 671 aa20.81■□□□□ 0.92
NOTCH3-205ENST00000600841 IFFO2Q5TF58 517 aa20.81■□□□□ 0.92
NOTCH3-205ENST00000600841 CCDC102BQ68D86 513 aa20.81■□□□□ 0.92
NOTCH3-205ENST00000600841 RASAL3Q86YV0 1011 aa20.81■□□□□ 0.92
NOTCH3-205ENST00000600841 KIF23Q02241 960 aaPredicted RBP20.8■□□□□ 0.92
NOTCH3-205ENST00000600841 POLA2Q14181 598 aa20.8■□□□□ 0.92
NOTCH3-205ENST00000600841 RASA3Q14644 834 aa20.8■□□□□ 0.92
NOTCH3-205ENST00000600841 SUPT20HL1Q3ZLR7 823 aa20.8■□□□□ 0.92
NOTCH3-205ENST00000600841 SSH3Q8TE77 659 aa20.8■□□□□ 0.92
NOTCH3-205ENST00000600841 XAGE2Q96GT9 111 aa20.8■□□□□ 0.92
NOTCH3-205ENST00000600841 ZDHHC15Q96MV8 337 aa20.8■□□□□ 0.92
NOTCH3-205ENST00000600841 RCAN3Q9UKA8 241 aa20.8■□□□□ 0.92
NOTCH3-205ENST00000600841 ZBTB22O15209 634 aa20.79■□□□□ 0.92
NOTCH3-205ENST00000600841 PPP1R12BO60237 982 aaPredicted RBP20.79■□□□□ 0.92
NOTCH3-205ENST00000600841 MVPQ14764 893 aaKnown RBP20.79■□□□□ 0.92
NOTCH3-205ENST00000600841 TNS4Q8IZW8 715 aa20.79■□□□□ 0.92
NOTCH3-205ENST00000600841 NEUROD6Q96NK8 337 aa20.79■□□□□ 0.92
NOTCH3-205ENST00000600841 ANGEL1Q9UNK9 670 aaKnown RBP20.79■□□□□ 0.92
NOTCH3-205ENST00000600841 OS9Q13438 667 aaPredicted RBP20.78■□□□□ 0.92
NOTCH3-205ENST00000600841 HHIPL2Q6UWX4 724 aa20.78■□□□□ 0.92
NOTCH3-205ENST00000600841 SALL1Q9NSC2 1324 aa20.78■□□□□ 0.92
NOTCH3-205ENST00000600841 SSC5DA1L4H1 1573 aa20.77■□□□□ 0.92
NOTCH3-205ENST00000600841 TCP10L2B9ZVM9 353 aa20.77■□□□□ 0.92
NOTCH3-205ENST00000600841 LDHBP07195 334 aaKnown RBP20.77■□□□□ 0.92
NOTCH3-205ENST00000600841 TNNI2P48788 182 aa20.77■□□□□ 0.92
NOTCH3-205ENST00000600841 GORABQ5T7V8 394 aa20.77■□□□□ 0.92
NOTCH3-205ENST00000600841 NBPF12Q5TAG4 269 aaPredicted RBP20.77■□□□□ 0.92
NOTCH3-205ENST00000600841 ZGPATQ8N5A5 531 aaKnown RBP20.77■□□□□ 0.92
NOTCH3-205ENST00000600841 TMOD2Q9NZR1 351 aa20.77■□□□□ 0.92
NOTCH3-205ENST00000600841 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.77■□□□□ 0.92
NOTCH3-205ENST00000600841 AKAP11Q9UKA4 1901 aa20.76■□□□□ 0.91
NOTCH3-205ENST00000600841 SURF6O75683 361 aaKnown RBP20.76■□□□□ 0.91
NOTCH3-205ENST00000600841 PRDX5P30044 214 aa20.76■□□□□ 0.91
NOTCH3-205ENST00000600841 RASGRF1Q13972 1273 aa20.76■□□□□ 0.91
NOTCH3-205ENST00000600841 LDLRAD1Q5T700 205 aa20.76■□□□□ 0.91
NOTCH3-205ENST00000600841 APOBEC3HQ6NTF7 200 aaKnown RBP20.76■□□□□ 0.91
NOTCH3-205ENST00000600841 REM2Q8IYK8 340 aaPredicted RBP20.76■□□□□ 0.91
NOTCH3-205ENST00000600841 TSKSQ9UJT2 592 aa20.76■□□□□ 0.91
NOTCH3-205ENST00000600841 PDS5AQ29RF7 1337 aaKnown RBP20.76■□□□□ 0.91
NOTCH3-205ENST00000600841 MAP3K11Q16584 847 aa20.75■□□□□ 0.91
NOTCH3-205ENST00000600841 FZD1Q9UP38 647 aa20.75■□□□□ 0.91
NOTCH3-205ENST00000600841 CACNB3P54284 484 aa20.74■□□□□ 0.91
NOTCH3-205ENST00000600841 DIXDC1Q155Q3 683 aa20.74■□□□□ 0.91
NOTCH3-205ENST00000600841 CEP85Q6P2H3 762 aa20.74■□□□□ 0.91
NOTCH3-205ENST00000600841 CSRNP1Q96S65 589 aa20.74■□□□□ 0.91
NOTCH3-205ENST00000600841 TMEM39BQ9GZU3 492 aa20.74■□□□□ 0.91
NOTCH3-205ENST00000600841 IREB2P48200 963 aaKnown RBP20.73■□□□□ 0.91
NOTCH3-205ENST00000600841 FKBP1CQ5VVH2 108 aa20.73■□□□□ 0.91
NOTCH3-205ENST00000600841 TEPSINQ96N21 525 aa20.73■□□□□ 0.91
NOTCH3-205ENST00000600841 GPR108Q9NPR9 543 aa20.73■□□□□ 0.91
NOTCH3-205ENST00000600841 ABCF2Q9UG63 623 aa20.73■□□□□ 0.91
NOTCH3-205ENST00000600841 DDX19BQ9UMR2 479 aa20.73■□□□□ 0.91
NOTCH3-205ENST00000600841 NOP58Q9Y2X3 529 aaKnown RBP20.73■□□□□ 0.91
NOTCH3-205ENST00000600841 DAGLAQ9Y4D2 1042 aa20.73■□□□□ 0.91
NOTCH3-205ENST00000600841 UNCXA6NJT0 531 aa20.72■□□□□ 0.91
NOTCH3-205ENST00000600841 MKRN3Q13064 507 aaKnown RBP20.72■□□□□ 0.91
NOTCH3-205ENST00000600841 SPTY2D1Q68D10 685 aaPredicted RBP20.72■□□□□ 0.91
NOTCH3-205ENST00000600841 FAM83AQ86UY5 434 aa20.72■□□□□ 0.91
NOTCH3-205ENST00000600841 DZIP1Q86YF9 867 aaKnown RBP20.72■□□□□ 0.91
NOTCH3-205ENST00000600841 SLC10A4Q96EP9 437 aa20.72■□□□□ 0.91
NOTCH3-205ENST00000600841 SAGE1Q9NXZ1 904 aa20.72■□□□□ 0.91
NOTCH3-205ENST00000600841 COG6Q9Y2V7 657 aa20.72■□□□□ 0.91
NOTCH3-205ENST00000600841 MYH2Q9UKX2 1941 aa20.72■□□□□ 0.91
NOTCH3-205ENST00000600841 USP2O75604 605 aaPredicted RBP20.71■□□□□ 0.91
NOTCH3-205ENST00000600841 TNNI3KQ59H18 835 aa20.71■□□□□ 0.91
NOTCH3-205ENST00000600841 CDAN1Q8IWY9 1227 aa20.71■□□□□ 0.91
NOTCH3-205ENST00000600841 FPGT-TNNI3KV9GXZ4 949 aa20.71■□□□□ 0.91
NOTCH3-205ENST00000600841 UQCRFS1P1P0C7P4 283 aa20.7■□□□□ 0.9
NOTCH3-205ENST00000600841 ARID4AP29374 1257 aaPredicted RBP20.7■□□□□ 0.9
NOTCH3-205ENST00000600841 SLF2Q8IX21 1173 aa20.7■□□□□ 0.9
NOTCH3-205ENST00000600841 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.7■□□□□ 0.9
NOTCH3-205ENST00000600841 SPATA5Q8NB90 893 aa20.7■□□□□ 0.9
NOTCH3-205ENST00000600841 CHMP4BQ9H444 224 aaKnown RBP20.7■□□□□ 0.9
NOTCH3-205ENST00000600841 RNF186Q9NXI6 227 aa20.7■□□□□ 0.9
NOTCH3-205ENST00000600841 HMG20BQ9P0W2 317 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms