RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 HSP90AB4PQ58FF6 505 aa34.69■■■■□ 3.14
SSBP4-206ENST00000599699 PRAMEF18Q5VWM3 479 aa34.69■■■■□ 3.14
SSBP4-206ENST00000599699 C2orf69Q8N8R5 385 aa34.69■■■■□ 3.14
SSBP4-206ENST00000599699 GBA2Q9HCG7 927 aaPredicted RBP34.69■■■■□ 3.14
SSBP4-206ENST00000599699 HDLBPQ00341 1268 aaKnown RBP34.68■■■■□ 3.14
SSBP4-206ENST00000599699 SAPCD2Q86UD0 394 aa34.68■■■■□ 3.14
SSBP4-206ENST00000599699 SIRT2Q8IXJ6 389 aa34.68■■■■□ 3.14
SSBP4-206ENST00000599699 MYH13Q9UKX3 1938 aa34.68■■■■□ 3.14
SSBP4-206ENST00000599699 LDHBP07195 334 aaKnown RBP34.67■■■■□ 3.14
SSBP4-206ENST00000599699 VEGFBP49765 207 aa34.67■■■■□ 3.14
SSBP4-206ENST00000599699 AOX1Q06278 1338 aa34.66■■■■□ 3.14
SSBP4-206ENST00000599699 GRM1Q13255 1194 aa34.66■■■■□ 3.14
SSBP4-206ENST00000599699 JMYQ8N9B5 988 aa34.66■■■■□ 3.14
SSBP4-206ENST00000599699 TDRD3Q9H7E2 651 aaKnown RBP34.66■■■■□ 3.14
SSBP4-206ENST00000599699 SALL1Q9NSC2 1324 aa34.65■■■■□ 3.14
SSBP4-206ENST00000599699 APBB1O00213 710 aa34.65■■■■□ 3.14
SSBP4-206ENST00000599699 ZGPATQ8N5A5 531 aaKnown RBP34.65■■■■□ 3.14
SSBP4-206ENST00000599699 DBNDD2Q9BQY9 259 aa34.65■■■■□ 3.14
SSBP4-206ENST00000599699 ZBTB22O15209 634 aa34.64■■■■□ 3.14
SSBP4-206ENST00000599699 PRDX5P30044 214 aa34.64■■■■□ 3.14
SSBP4-206ENST00000599699 NF2P35240 595 aa34.64■■■■□ 3.14
SSBP4-206ENST00000599699 HUNKP57058 714 aa34.64■■■■□ 3.14
SSBP4-206ENST00000599699 CCDC158Q5M9N0 1113 aa34.64■■■■□ 3.14
SSBP4-206ENST00000599699 TTC39AQ5SRH9 613 aa34.64■■■■□ 3.14
SSBP4-206ENST00000599699 MRIQ9BWK5 157 aa34.64■■■■□ 3.14
SSBP4-206ENST00000599699 DEFB129Q9H1M3 183 aa34.64■■■■□ 3.14
SSBP4-206ENST00000599699 ZNF70Q9UC06 446 aaPredicted RBP34.64■■■■□ 3.14
SSBP4-206ENST00000599699 ABCF2Q9UG63 623 aa34.64■■■■□ 3.14
SSBP4-206ENST00000599699 PDS5AQ29RF7 1337 aaKnown RBP34.63■■■■□ 3.13
SSBP4-206ENST00000599699 UQCRFS1P1P0C7P4 283 aa34.63■■■■□ 3.13
SSBP4-206ENST00000599699 CCDC8Q9H0W5 538 aaPredicted RBP34.63■■■■□ 3.13
SSBP4-206ENST00000599699 ARID4AP29374 1257 aaPredicted RBP34.62■■■■□ 3.13
SSBP4-206ENST00000599699 SPDYE2Q495Y8 402 aa34.62■■■■□ 3.13
SSBP4-206ENST00000599699 CYP4F22Q6NT55 531 aa34.62■■■■□ 3.13
SSBP4-206ENST00000599699 SPATA5Q8NB90 893 aa34.62■■■■□ 3.13
SSBP4-206ENST00000599699 HMG20BQ9P0W2 317 aa34.62■■■■□ 3.13
SSBP4-206ENST00000599699 WDR33Q9C0J8 1336 aaKnown RBP34.61■■■■□ 3.13
SSBP4-206ENST00000599699 ECE1P42892 770 aa34.61■■■■□ 3.13
SSBP4-206ENST00000599699 HHIPL2Q6UWX4 724 aa34.61■■■■□ 3.13
SSBP4-206ENST00000599699 CAPNS2Q96L46 248 aa34.61■■■■□ 3.13
SSBP4-206ENST00000599699 ZDHHC15Q96MV8 337 aa34.61■■■■□ 3.13
SSBP4-206ENST00000599699 TTLL12Q14166 644 aaPredicted RBP34.6■■■■□ 3.13
SSBP4-206ENST00000599699 SPTY2D1Q68D10 685 aaPredicted RBP34.6■■■■□ 3.13
SSBP4-206ENST00000599699 RHPN1Q8TCX5 695 aa34.6■■■■□ 3.13
SSBP4-206ENST00000599699 EAF2Q96CJ1 260 aaPredicted RBP34.6■■■■□ 3.13
SSBP4-206ENST00000599699 BCL11AQ9H165 835 aa34.6■■■■□ 3.13
SSBP4-206ENST00000599699 TNFAIP1Q13829 316 aa34.59■■■■□ 3.13
SSBP4-206ENST00000599699 DIXDC1Q155Q3 683 aa34.59■■■■□ 3.13
SSBP4-206ENST00000599699 PI16Q6UXB8 463 aa34.59■■■■□ 3.13
SSBP4-206ENST00000599699 AACSQ86V21 672 aa34.59■■■■□ 3.13
SSBP4-206ENST00000599699 DZIP1Q86YF9 867 aaKnown RBP34.59■■■■□ 3.13
SSBP4-206ENST00000599699 HHIPL1Q96JK4 782 aa34.59■■■■□ 3.13
SSBP4-206ENST00000599699 IL1RAPL2Q9NP60 686 aa34.59■■■■□ 3.13
SSBP4-206ENST00000599699 DBNLQ9UJU6 430 aaKnown RBP34.59■■■■□ 3.13
SSBP4-206ENST00000599699 PPP2R3BQ9Y5P8 575 aa34.59■■■■□ 3.13
SSBP4-206ENST00000599699 KIF1BPQ96EK5 621 aa34.58■■■■□ 3.13
SSBP4-206ENST00000599699 TLR7Q9NYK1 1049 aaKnown RBP34.58■■■■□ 3.13
SSBP4-206ENST00000599699 TCP10L2B9ZVM9 353 aa34.57■■■■□ 3.12
SSBP4-206ENST00000599699 RAB11FIP3O75154 756 aa34.57■■■■□ 3.12
SSBP4-206ENST00000599699 MCAMP43121 646 aa34.57■■■■□ 3.12
SSBP4-206ENST00000599699 FKBP1BP68106 108 aa34.57■■■■□ 3.12
SSBP4-206ENST00000599699 TMOD2Q9NZR1 351 aa34.57■■■■□ 3.12
SSBP4-206ENST00000599699 ECM29Q5VYK3 1845 aa34.56■■■■□ 3.12
SSBP4-206ENST00000599699 RASA3Q14644 834 aa34.56■■■■□ 3.12
SSBP4-206ENST00000599699 APOBEC3HQ6NTF7 200 aaKnown RBP34.56■■■■□ 3.12
SSBP4-206ENST00000599699 SNRKQ9NRH2 765 aa34.56■■■■□ 3.12
SSBP4-206ENST00000599699 TNNI2P48788 182 aa34.55■■■■□ 3.12
SSBP4-206ENST00000599699 ERICH6Q7L0X2 663 aa34.55■■■■□ 3.12
SSBP4-206ENST00000599699 CLASRPQ8N2M8 674 aaKnown RBP34.55■■■■□ 3.12
SSBP4-206ENST00000599699 CRBNQ96SW2 442 aa34.55■■■■□ 3.12
SSBP4-206ENST00000599699 DAGLAQ9Y4D2 1042 aa34.55■■■■□ 3.12
SSBP4-206ENST00000599699 CACNB3P54284 484 aa34.54■■■■□ 3.12
SSBP4-206ENST00000599699 PRKG1Q13976 671 aa34.54■■■■□ 3.12
SSBP4-206ENST00000599699 TBC1D9Q6ZT07 1266 aa34.54■■■■□ 3.12
SSBP4-206ENST00000599699 MOB2Q70IA6 237 aa34.54■■■■□ 3.12
SSBP4-206ENST00000599699 RGMBQ6NW40 437 aa34.53■■■■□ 3.12
SSBP4-206ENST00000599699 SLF2Q8IX21 1173 aa34.53■■■■□ 3.12
SSBP4-206ENST00000599699 ZNF157P51786 506 aaPredicted RBP34.52■■■■□ 3.12
SSBP4-206ENST00000599699 SUPT20HL1Q3ZLR7 823 aa34.52■■■■□ 3.12
SSBP4-206ENST00000599699 UBE2Q2LH0YL09 131 aa34.51■■■■□ 3.12
SSBP4-206ENST00000599699 ZNF512BQ96KM6 892 aaPredicted RBP34.51■■■■□ 3.12
SSBP4-206ENST00000599699 RAI14Q9P0K7 980 aa34.51■■■■□ 3.12
SSBP4-206ENST00000599699 LRP2BPQ9P2M1 347 aa34.51■■■■□ 3.12
SSBP4-206ENST00000599699 PAPPA2Q9BXP8 1791 aa34.5■■■■□ 3.11
SSBP4-206ENST00000599699 IFIT2P09913 472 aaKnown RBP34.5■■■■□ 3.11
SSBP4-206ENST00000599699 ARMC9Q7Z3E5 817 aa34.5■■■■□ 3.11
SSBP4-206ENST00000599699 AOC2O75106 756 aa34.49■■■■□ 3.11
SSBP4-206ENST00000599699 MECOMQ03112 1051 aa34.49■■■■□ 3.11
SSBP4-206ENST00000599699 NBPF12Q5TAG4 269 aaPredicted RBP34.49■■■■□ 3.11
SSBP4-206ENST00000599699 PCNTO95613 3336 aa34.48■■■■□ 3.11
SSBP4-206ENST00000599699 CDC42EP5Q6NZY7 148 aa34.48■■■■□ 3.11
SSBP4-206ENST00000599699 TMEM39BQ9GZU3 492 aa34.48■■■■□ 3.11
SSBP4-206ENST00000599699 USP40Q9NVE5 1235 aa34.48■■■■□ 3.11
SSBP4-206ENST00000599699 ANGEL1Q9UNK9 670 aaKnown RBP34.48■■■■□ 3.11
SSBP4-206ENST00000599699 PPP1R12BO60237 982 aaPredicted RBP34.47■■■■□ 3.11
SSBP4-206ENST00000599699 HSPA1AP0DMV8 641 aaKnown RBP34.47■■■■□ 3.11
SSBP4-206ENST00000599699 HSPA1BP0DMV9 641 aaKnown RBP34.47■■■■□ 3.11
SSBP4-206ENST00000599699 CCDC102AQ96A19 550 aa34.47■■■■□ 3.11
SSBP4-206ENST00000599699 ZAP70P43403 619 aa34.46■■■■□ 3.11
SSBP4-206ENST00000599699 GSTO1P78417 241 aa34.46■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms