RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 CSRNP1Q96S65 589 aa17.14■□□□□ 0.33
SCAF1-203ENST00000598359 CEP126Q9P2H0 1117 aa17.14■□□□□ 0.33
SCAF1-203ENST00000598359 COL1A1P02452 1464 aaPredicted RBP17.13■□□□□ 0.33
SCAF1-203ENST00000598359 ECM29Q5VYK3 1845 aa17.13■□□□□ 0.33
SCAF1-203ENST00000598359 CIAO1O76071 339 aa17.13■□□□□ 0.33
SCAF1-203ENST00000598359 ATP2B3Q16720 1220 aa17.13■□□□□ 0.33
SCAF1-203ENST00000598359 NBPF12Q5TAG4 269 aaPredicted RBP17.13■□□□□ 0.33
SCAF1-203ENST00000598359 DZIP1LQ8IYY4 767 aaKnown RBP17.13■□□□□ 0.33
SCAF1-203ENST00000598359 TMEM57Q8N5G2 664 aa17.13■□□□□ 0.33
SCAF1-203ENST00000598359 ZNF70Q9UC06 446 aaPredicted RBP17.13■□□□□ 0.33
SCAF1-203ENST00000598359 SERPINA10Q9UK55 444 aa17.13■□□□□ 0.33
SCAF1-203ENST00000598359 ANGEL1Q9UNK9 670 aaKnown RBP17.13■□□□□ 0.33
SCAF1-203ENST00000598359 SRGAP3O43295 1099 aa17.12■□□□□ 0.33
SCAF1-203ENST00000598359 TRPA1O75762 1119 aa17.12■□□□□ 0.33
SCAF1-203ENST00000598359 ADORA1P30542 326 aa17.12■□□□□ 0.33
SCAF1-203ENST00000598359 RASA3Q14644 834 aa17.12■□□□□ 0.33
SCAF1-203ENST00000598359 SPDYE2Q495Y8 402 aa17.12■□□□□ 0.33
SCAF1-203ENST00000598359 ARMC9Q7Z3E5 817 aa17.12■□□□□ 0.33
SCAF1-203ENST00000598359 CDAN1Q8IWY9 1227 aa17.12■□□□□ 0.33
SCAF1-203ENST00000598359 COPRSQ9NQ92 184 aa17.12■□□□□ 0.33
SCAF1-203ENST00000598359 HDAC5Q9UQL6 1122 aa17.12■□□□□ 0.33
SCAF1-203ENST00000598359 TCP10L2B9ZVM9 353 aa17.11■□□□□ 0.33
SCAF1-203ENST00000598359 IL15P40933 162 aaPredicted RBP17.11■□□□□ 0.33
SCAF1-203ENST00000598359 CACNB3P54284 484 aa17.11■□□□□ 0.33
SCAF1-203ENST00000598359 ZKSCAN2Q63HK3 967 aa17.11■□□□□ 0.33
SCAF1-203ENST00000598359 TBC1D22AQ8WUA7 517 aa17.11■□□□□ 0.33
SCAF1-203ENST00000598359 RNF186Q9NXI6 227 aa17.11■□□□□ 0.33
SCAF1-203ENST00000598359 FBXO3Q9UK99 471 aa17.11■□□□□ 0.33
SCAF1-203ENST00000598359 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.11■□□□□ 0.33
SCAF1-203ENST00000598359 AKAP11Q9UKA4 1901 aa17.11■□□□□ 0.33
SCAF1-203ENST00000598359 PHKA1P46020 1223 aa17.1■□□□□ 0.33
SCAF1-203ENST00000598359 CLMNQ96JQ2 1002 aa17.1■□□□□ 0.33
SCAF1-203ENST00000598359 ZBED9Q6R2W3 1325 aa17.1■□□□□ 0.33
SCAF1-203ENST00000598359 PNMA6EA0A0J9YXQ4 647 aa17.09■□□□□ 0.33
SCAF1-203ENST00000598359 GNAI2P04899 355 aa17.09■□□□□ 0.33
SCAF1-203ENST00000598359 TIMM10P62072 90 aa17.09■□□□□ 0.33
SCAF1-203ENST00000598359 TFCP2Q12800 502 aa17.09■□□□□ 0.33
SCAF1-203ENST00000598359 LDLRAD1Q5T700 205 aa17.09■□□□□ 0.33
SCAF1-203ENST00000598359 TEKT1Q969V4 418 aa17.09■□□□□ 0.33
SCAF1-203ENST00000598359 TMEM39BQ9GZU3 492 aa17.09■□□□□ 0.33
SCAF1-203ENST00000598359 PPP2R3BQ9Y5P8 575 aa17.09■□□□□ 0.33
SCAF1-203ENST00000598359 RLBP1P12271 317 aa17.08■□□□□ 0.32
SCAF1-203ENST00000598359 SOX10P56693 466 aa17.08■□□□□ 0.32
SCAF1-203ENST00000598359 MTX1Q13505 466 aa17.08■□□□□ 0.32
SCAF1-203ENST00000598359 C1orf115Q9H7X2 142 aa17.08■□□□□ 0.32
SCAF1-203ENST00000598359 PPP1R12BO60237 982 aaPredicted RBP17.07■□□□□ 0.32
SCAF1-203ENST00000598359 SUPT20HL1Q3ZLR7 823 aa17.07■□□□□ 0.32
SCAF1-203ENST00000598359 PRPF38BQ5VTL8 546 aaKnown RBP17.07■□□□□ 0.32
SCAF1-203ENST00000598359 TEPSINQ96N21 525 aa17.07■□□□□ 0.32
SCAF1-203ENST00000598359 SAGE1Q9NXZ1 904 aa17.07■□□□□ 0.32
SCAF1-203ENST00000598359 MYH13Q9UKX3 1938 aa17.07■□□□□ 0.32
SCAF1-203ENST00000598359 USP2O75604 605 aaPredicted RBP17.06■□□□□ 0.32
SCAF1-203ENST00000598359 PRDX5P30044 214 aa17.06■□□□□ 0.32
SCAF1-203ENST00000598359 HDLBPQ00341 1268 aaKnown RBP17.06■□□□□ 0.32
SCAF1-203ENST00000598359 TNFAIP1Q13829 316 aa17.06■□□□□ 0.32
SCAF1-203ENST00000598359 DIXDC1Q155Q3 683 aa17.06■□□□□ 0.32
SCAF1-203ENST00000598359 CCDC102BQ68D86 513 aa17.06■□□□□ 0.32
SCAF1-203ENST00000598359 APOBEC3HQ6NTF7 200 aaKnown RBP17.06■□□□□ 0.32
SCAF1-203ENST00000598359 FTSJ3Q8IY81 847 aaKnown RBP17.06■□□□□ 0.32
SCAF1-203ENST00000598359 WDR66Q8TBY9 1149 aa17.06■□□□□ 0.32
SCAF1-203ENST00000598359 SLC10A4Q96EP9 437 aa17.06■□□□□ 0.32
SCAF1-203ENST00000598359 ZDHHC15Q96MV8 337 aa17.06■□□□□ 0.32
SCAF1-203ENST00000598359 A0A1B0GUL7 405 aa17.05■□□□□ 0.32
SCAF1-203ENST00000598359 MAP3K11Q16584 847 aa17.05■□□□□ 0.32
SCAF1-203ENST00000598359 SPRYD7Q5W111 196 aa17.05■□□□□ 0.32
SCAF1-203ENST00000598359 ITPRIPQ8IWB1 547 aa17.05■□□□□ 0.32
SCAF1-203ENST00000598359 GNL3LQ9NVN8 582 aaKnown RBP17.05■□□□□ 0.32
SCAF1-203ENST00000598359 MAST3O60307 1309 aa17.04■□□□□ 0.32
SCAF1-203ENST00000598359 TBC1D8O95759 1140 aa17.04■□□□□ 0.32
SCAF1-203ENST00000598359 XAGE2Q96GT9 111 aa17.04■□□□□ 0.32
SCAF1-203ENST00000598359 NEUROD6Q96NK8 337 aa17.04■□□□□ 0.32
SCAF1-203ENST00000598359 SUGT1Q9Y2Z0 365 aa17.04■□□□□ 0.32
SCAF1-203ENST00000598359 LDHBP07195 334 aaKnown RBP17.03■□□□□ 0.32
SCAF1-203ENST00000598359 GJA5P36382 358 aa17.03■□□□□ 0.32
SCAF1-203ENST00000598359 IREB2P48200 963 aaKnown RBP17.03■□□□□ 0.32
SCAF1-203ENST00000598359 TNNI2P48788 182 aa17.03■□□□□ 0.32
SCAF1-203ENST00000598359 RASGRF1Q13972 1273 aa17.03■□□□□ 0.32
SCAF1-203ENST00000598359 HHIPL2Q6UWX4 724 aa17.03■□□□□ 0.32
SCAF1-203ENST00000598359 REM2Q8IYK8 340 aaPredicted RBP17.03■□□□□ 0.32
SCAF1-203ENST00000598359 PANK1Q8TE04 598 aa17.03■□□□□ 0.32
SCAF1-203ENST00000598359 WNK4Q96J92 1243 aa17.03■□□□□ 0.32
SCAF1-203ENST00000598359 MRIQ9BWK5 157 aa17.03■□□□□ 0.32
SCAF1-203ENST00000598359 DENND2AQ9ULE3 1009 aa17.03■□□□□ 0.32
SCAF1-203ENST00000598359 DAGLAQ9Y4D2 1042 aa17.03■□□□□ 0.32
SCAF1-203ENST00000598359 TM4SF4P48230 202 aa17.02■□□□□ 0.32
SCAF1-203ENST00000598359 G3BP1Q13283 466 aaKnown RBP eCLIP17.02■□□□□ 0.32
SCAF1-203ENST00000598359 R3HDMLQ9H3Y0 253 aa17.02■□□□□ 0.32
SCAF1-203ENST00000598359 ELP3Q9H9T3 547 aa17.02■□□□□ 0.32
SCAF1-203ENST00000598359 TMOD2Q9NZR1 351 aa17.02■□□□□ 0.32
SCAF1-203ENST00000598359 AKAP2Q9Y2D5 859 aa17.02■□□□□ 0.32
SCAF1-203ENST00000598359 OTOFQ9HC10 1997 aa17.02■□□□□ 0.31
SCAF1-203ENST00000598359 CDC42EP5Q6NZY7 148 aa17.01■□□□□ 0.31
SCAF1-203ENST00000598359 PI16Q6UXB8 463 aa17.01■□□□□ 0.31
SCAF1-203ENST00000598359 ANKRD13AQ8IZ07 590 aa17.01■□□□□ 0.31
SCAF1-203ENST00000598359 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
SCAF1-203ENST00000598359 SALL1Q9NSC2 1324 aa17■□□□□ 0.31
SCAF1-203ENST00000598359 SEMA3EO15041 775 aa17■□□□□ 0.31
SCAF1-203ENST00000598359 ZBTB7BO15156 539 aaPredicted RBP17■□□□□ 0.31
SCAF1-203ENST00000598359 SREBF2Q12772 1141 aa17■□□□□ 0.31
SCAF1-203ENST00000598359 TCP10Q12799 353 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms