RNA–Protein interactions for RNA: ENST00000598271.5

FKRP-216, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-216ENST00000598271 ZBED3Q96IU2 234 aaPredicted RBP11.98□□□□□ -0.49
FKRP-216ENST00000598271 CCDC136Q96JN2 1154 aa11.98□□□□□ -0.49
FKRP-216ENST00000598271 CLMNQ96JQ2 1002 aa11.98□□□□□ -0.49
FKRP-216ENST00000598271 FAM84BQ96KN1 310 aaPredicted RBP11.98□□□□□ -0.49
FKRP-216ENST00000598271 NOB1Q9ULX3 412 aaKnown RBP11.98□□□□□ -0.49
FKRP-216ENST00000598271 SSC5DA1L4H1 1573 aa11.97□□□□□ -0.49
FKRP-216ENST00000598271 UBTFL1P0CB47 393 aaPredicted RBP11.97□□□□□ -0.49
FKRP-216ENST00000598271 CRKP46108 304 aa11.97□□□□□ -0.49
FKRP-216ENST00000598271 SOX10P56693 466 aa11.97□□□□□ -0.49
FKRP-216ENST00000598271 SREBF2Q12772 1141 aa11.97□□□□□ -0.49
FKRP-216ENST00000598271 AAMPQ13685 434 aa11.97□□□□□ -0.49
FKRP-216ENST00000598271 RASA3Q14644 834 aa11.97□□□□□ -0.49
FKRP-216ENST00000598271 DZIP1LQ8IYY4 767 aaKnown RBP11.97□□□□□ -0.49
FKRP-216ENST00000598271 TDRD7Q8NHU6 1098 aaKnown RBP11.97□□□□□ -0.49
FKRP-216ENST00000598271 PANK1Q8TE04 598 aa11.97□□□□□ -0.49
FKRP-216ENST00000598271 ZNF70Q9UC06 446 aaPredicted RBP11.97□□□□□ -0.49
FKRP-216ENST00000598271 RIPOR2Q9Y4F9 1068 aa11.97□□□□□ -0.49
FKRP-216ENST00000598271 OTOFQ9HC10 1997 aa11.97□□□□□ -0.49
FKRP-216ENST00000598271 UTYO14607 1347 aa11.96□□□□□ -0.49
FKRP-216ENST00000598271 FAM205AQ6ZU69 1335 aa11.96□□□□□ -0.49
FKRP-216ENST00000598271 IFIT1P09914 478 aaKnown RBP11.96□□□□□ -0.49
FKRP-216ENST00000598271 SLC5A1P13866 664 aa11.96□□□□□ -0.49
FKRP-216ENST00000598271 IREB2P48200 963 aaKnown RBP11.96□□□□□ -0.49
FKRP-216ENST00000598271 BCAMP50895 628 aa11.96□□□□□ -0.49
FKRP-216ENST00000598271 CACNB3P54284 484 aa11.96□□□□□ -0.49
FKRP-216ENST00000598271 FKBP1AP62942 108 aaKnown RBP11.96□□□□□ -0.49
FKRP-216ENST00000598271 GRIK5Q16478 980 aa11.96□□□□□ -0.49
FKRP-216ENST00000598271 RABL6Q3YEC7 729 aaPredicted RBP11.96□□□□□ -0.49
FKRP-216ENST00000598271 SUPT20HL1Q3ZLR7 823 aa11.96□□□□□ -0.49
FKRP-216ENST00000598271 CTU1Q7Z7A3 348 aaKnown RBP11.96□□□□□ -0.49
FKRP-216ENST00000598271 REM2Q8IYK8 340 aaPredicted RBP11.96□□□□□ -0.49
FKRP-216ENST00000598271 USP44Q9H0E7 712 aa11.96□□□□□ -0.49
FKRP-216ENST00000598271 PDE8BO95263 885 aa11.95□□□□□ -0.5
FKRP-216ENST00000598271 TRIM27P14373 513 aa11.95□□□□□ -0.5
FKRP-216ENST00000598271 MLLT1Q03111 559 aaPredicted RBP11.95□□□□□ -0.5
FKRP-216ENST00000598271 TNFAIP1Q13829 316 aa11.95□□□□□ -0.5
FKRP-216ENST00000598271 PUM3Q15397 648 aaKnown RBP11.95□□□□□ -0.5
FKRP-216ENST00000598271 SPRYD7Q5W111 196 aa11.95□□□□□ -0.5
FKRP-216ENST00000598271 FTSJ3Q8IY81 847 aaKnown RBP11.95□□□□□ -0.5
FKRP-216ENST00000598271 MTMR14Q8NCE2 650 aa11.95□□□□□ -0.5
FKRP-216ENST00000598271 ZNF296Q8WUU4 475 aaPredicted RBP11.95□□□□□ -0.5
FKRP-216ENST00000598271 WNK4Q96J92 1243 aa11.95□□□□□ -0.5
FKRP-216ENST00000598271 ELP3Q9H9T3 547 aa11.95□□□□□ -0.5
FKRP-216ENST00000598271 TMOD2Q9NZR1 351 aa11.95□□□□□ -0.5
FKRP-216ENST00000598271 COG6Q9Y2V7 657 aa11.95□□□□□ -0.5
FKRP-216ENST00000598271 PPP2R3BQ9Y5P8 575 aa11.95□□□□□ -0.5
FKRP-216ENST00000598271 EYA2O00167 538 aa11.94□□□□□ -0.5
FKRP-216ENST00000598271 RLBP1P12271 317 aa11.94□□□□□ -0.5
FKRP-216ENST00000598271 TNNI2P48788 182 aa11.94□□□□□ -0.5
FKRP-216ENST00000598271 MVPQ14764 893 aaKnown RBP11.94□□□□□ -0.5
FKRP-216ENST00000598271 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
FKRP-216ENST00000598271 CDAN1Q8IWY9 1227 aa11.94□□□□□ -0.5
FKRP-216ENST00000598271 API5Q9BZZ5 524 aaKnown RBP11.94□□□□□ -0.5
FKRP-216ENST00000598271 TMEM39BQ9GZU3 492 aa11.94□□□□□ -0.5
FKRP-216ENST00000598271 PA2G4Q9UQ80 394 aaKnown RBP11.94□□□□□ -0.5
FKRP-216ENST00000598271 TNNQ9UQP3 1299 aa11.94□□□□□ -0.5
FKRP-216ENST00000598271 LRRFIP2Q9Y608 721 aaKnown RBP11.94□□□□□ -0.5
FKRP-216ENST00000598271 GPR25O00155 361 aa11.93□□□□□ -0.5
FKRP-216ENST00000598271 LDLRAD1Q5T700 205 aa11.93□□□□□ -0.5
FKRP-216ENST00000598271 FBXO33Q7Z6M2 555 aa11.93□□□□□ -0.5
FKRP-216ENST00000598271 TBC1D22AQ8WUA7 517 aa11.93□□□□□ -0.5
FKRP-216ENST00000598271 TEKT1Q969V4 418 aa11.93□□□□□ -0.5
FKRP-216ENST00000598271 SERPINA10Q9UK55 444 aa11.93□□□□□ -0.5
FKRP-216ENST00000598271 MANSC4A6NHS7 340 aaPredicted RBP11.92□□□□□ -0.5
FKRP-216ENST00000598271 FKTNO75072 461 aa11.92□□□□□ -0.5
FKRP-216ENST00000598271 USP2O75604 605 aaPredicted RBP11.92□□□□□ -0.5
FKRP-216ENST00000598271 TM4SF4P48230 202 aa11.92□□□□□ -0.5
FKRP-216ENST00000598271 ATP2B3Q16720 1220 aa11.92□□□□□ -0.5
FKRP-216ENST00000598271 VGLL2Q8N8G2 317 aa11.92□□□□□ -0.5
FKRP-216ENST00000598271 CLUAP1Q96AJ1 413 aa11.92□□□□□ -0.5
FKRP-216ENST00000598271 R3HDMLQ9H3Y0 253 aa11.92□□□□□ -0.5
FKRP-216ENST00000598271 CEP126Q9P2H0 1117 aa11.92□□□□□ -0.5
FKRP-216ENST00000598271 MAST3O60307 1309 aa11.91□□□□□ -0.5
FKRP-216ENST00000598271 GJA5P36382 358 aa11.91□□□□□ -0.5
FKRP-216ENST00000598271 RFX5P48382 616 aaPredicted RBP11.91□□□□□ -0.5
FKRP-216ENST00000598271 IFNL1Q8IU54 200 aa11.91□□□□□ -0.5
FKRP-216ENST00000598271 ANKRD13AQ8IZ07 590 aa11.91□□□□□ -0.5
FKRP-216ENST00000598271 TMEM57Q8N5G2 664 aa11.91□□□□□ -0.5
FKRP-216ENST00000598271 LPIN2Q92539 896 aa11.91□□□□□ -0.5
FKRP-216ENST00000598271 OPTNQ96CV9 577 aa11.91□□□□□ -0.5
FKRP-216ENST00000598271 MEIS3Q99687 375 aa11.91□□□□□ -0.5
FKRP-216ENST00000598271 DDX19BQ9UMR2 479 aa11.91□□□□□ -0.5
FKRP-216ENST00000598271 CSADQ9Y600 493 aa11.91□□□□□ -0.5
FKRP-216ENST00000598271 IGF2BP3O00425 579 aaKnown RBP eCLIP11.9□□□□□ -0.5
FKRP-216ENST00000598271 ECM2O94769 699 aaPredicted RBP11.9□□□□□ -0.5
FKRP-216ENST00000598271 TCP10Q12799 353 aa11.9□□□□□ -0.5
FKRP-216ENST00000598271 OTUD5Q96G74 571 aa11.9□□□□□ -0.5
FKRP-216ENST00000598271 CHMP4BQ9H444 224 aaKnown RBP11.9□□□□□ -0.5
FKRP-216ENST00000598271 GNL3LQ9NVN8 582 aaKnown RBP11.9□□□□□ -0.5
FKRP-216ENST00000598271 HPS5Q9UPZ3 1129 aa11.9□□□□□ -0.5
FKRP-216ENST00000598271 ALDH1A1P00352 501 aa11.89□□□□□ -0.51
FKRP-216ENST00000598271 ZBTB48P10074 688 aaPredicted RBP11.89□□□□□ -0.51
FKRP-216ENST00000598271 FGFR2P21802 821 aa11.89□□□□□ -0.51
FKRP-216ENST00000598271 ADORA1P30542 326 aa11.89□□□□□ -0.51
FKRP-216ENST00000598271 DIXDC1Q155Q3 683 aa11.89□□□□□ -0.51
FKRP-216ENST00000598271 MAP3K11Q16584 847 aa11.89□□□□□ -0.51
FKRP-216ENST00000598271 OTUD7BQ6GQQ9 843 aa11.89□□□□□ -0.51
FKRP-216ENST00000598271 ATG9AQ7Z3C6 839 aa11.89□□□□□ -0.51
FKRP-216ENST00000598271 ITPRIPQ8IWB1 547 aa11.89□□□□□ -0.51
FKRP-216ENST00000598271 TRIM17Q9Y577 477 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms