RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 NCOR1O75376 2440 aa16.87■□□□□ 0.29
IRF3-218ENST00000597369 SPEF2Q9C093 1822 aa16.86■□□□□ 0.29
IRF3-218ENST00000597369 SNAPC2Q13487 334 aa16.86■□□□□ 0.29
IRF3-218ENST00000597369 ERO1BQ86YB8 467 aa16.86■□□□□ 0.29
IRF3-218ENST00000597369 CPA4Q9UI42 421 aa16.86■□□□□ 0.29
IRF3-218ENST00000597369 ZMYND8Q9ULU4 1186 aaPredicted RBP16.86■□□□□ 0.29
IRF3-218ENST00000597369 ADGRA2Q96PE1 1338 aa16.86■□□□□ 0.29
IRF3-218ENST00000597369 ECM2O94769 699 aaPredicted RBP16.85■□□□□ 0.29
IRF3-218ENST00000597369 PRKCZQ05513 592 aa16.85■□□□□ 0.29
IRF3-218ENST00000597369 C7orf61Q8IZ16 206 aa16.85■□□□□ 0.29
IRF3-218ENST00000597369 ANKLE1Q8NAG6 615 aa16.85■□□□□ 0.29
IRF3-218ENST00000597369 CCDC191Q8NCU4 936 aa16.85■□□□□ 0.29
IRF3-218ENST00000597369 PXYLP1Q8TE99 480 aa16.85■□□□□ 0.29
IRF3-218ENST00000597369 DEFB118Q96PH6 123 aa16.85■□□□□ 0.29
IRF3-218ENST00000597369 UBE2OQ9C0C9 1292 aaKnown RBP16.85■□□□□ 0.29
IRF3-218ENST00000597369 DBF4Q9UBU7 674 aaPredicted RBP16.85■□□□□ 0.29
IRF3-218ENST00000597369 MYH3P11055 1940 aa16.85■□□□□ 0.29
IRF3-218ENST00000597369 AOX1Q06278 1338 aa16.85■□□□□ 0.29
IRF3-218ENST00000597369 IRS2Q9Y4H2 1338 aa16.85■□□□□ 0.29
IRF3-218ENST00000597369 IRF6O14896 467 aa16.84■□□□□ 0.29
IRF3-218ENST00000597369 PPP2R1AP30153 589 aa16.84■□□□□ 0.29
IRF3-218ENST00000597369 FKBP1AP62942 108 aaKnown RBP16.84■□□□□ 0.29
IRF3-218ENST00000597369 CD209Q9NNX6 404 aa16.84■□□□□ 0.29
IRF3-218ENST00000597369 HYPKQ9NX55 129 aa16.84■□□□□ 0.29
IRF3-218ENST00000597369 ADCY3O60266 1144 aa16.83■□□□□ 0.28
IRF3-218ENST00000597369 COL2A1P02458 1487 aaPredicted RBP16.83■□□□□ 0.28
IRF3-218ENST00000597369 SPDYE2Q495Y8 402 aa16.83■□□□□ 0.28
IRF3-218ENST00000597369 ANKRD23Q86SG2 305 aa16.83■□□□□ 0.28
IRF3-218ENST00000597369 ARAP2Q8WZ64 1704 aa16.83■□□□□ 0.28
IRF3-218ENST00000597369 KLRK1P26718 216 aa16.82■□□□□ 0.28
IRF3-218ENST00000597369 HOXD11P31277 338 aaPredicted RBP16.82■□□□□ 0.28
IRF3-218ENST00000597369 FCGRTP55899 365 aa16.82■□□□□ 0.28
IRF3-218ENST00000597369 PPIL2Q13356 520 aa16.82■□□□□ 0.28
IRF3-218ENST00000597369 FAM122AQ96E09 287 aa16.82■□□□□ 0.28
IRF3-218ENST00000597369 SNCAIPQ9Y6H5 919 aa16.82■□□□□ 0.28
IRF3-218ENST00000597369 DOCK3Q8IZD9 2030 aa16.81■□□□□ 0.28
IRF3-218ENST00000597369 INHAP05111 366 aa16.81■□□□□ 0.28
IRF3-218ENST00000597369 HOXB7P09629 217 aa16.81■□□□□ 0.28
IRF3-218ENST00000597369 SYN1P17600 705 aa16.81■□□□□ 0.28
IRF3-218ENST00000597369 HDGFL1Q5TGJ6 251 aa16.81■□□□□ 0.28
IRF3-218ENST00000597369 CDAN1Q8IWY9 1227 aa16.81■□□□□ 0.28
IRF3-218ENST00000597369 TTLL11Q8NHH1 800 aa16.81■□□□□ 0.28
IRF3-218ENST00000597369 DIS3LQ8TF46 1054 aaKnown RBP16.81■□□□□ 0.28
IRF3-218ENST00000597369 ANKRD2Q9GZV1 360 aa16.81■□□□□ 0.28
IRF3-218ENST00000597369 ZNF70Q9UC06 446 aaPredicted RBP16.81■□□□□ 0.28
IRF3-218ENST00000597369 GABRQQ9UN88 632 aa16.81■□□□□ 0.28
IRF3-218ENST00000597369 F8W031 263 aaPredicted RBP16.8■□□□□ 0.28
IRF3-218ENST00000597369 BCRP11274 1271 aa16.8■□□□□ 0.28
IRF3-218ENST00000597369 CTSWP56202 376 aa16.8■□□□□ 0.28
IRF3-218ENST00000597369 IRF5Q13568 498 aa16.8■□□□□ 0.28
IRF3-218ENST00000597369 RIC3Q7Z5B4 369 aa16.8■□□□□ 0.28
IRF3-218ENST00000597369 MAFAQ8NHW3 353 aaPredicted RBP16.8■□□□□ 0.28
IRF3-218ENST00000597369 PNNQ9H307 717 aaKnown RBP16.8■□□□□ 0.28
IRF3-218ENST00000597369 RAPGEFL1Q9UHV5 662 aa16.8■□□□□ 0.28
IRF3-218ENST00000597369 TNFRSF10AO00220 468 aa16.79■□□□□ 0.28
IRF3-218ENST00000597369 PDHXO00330 501 aa16.79■□□□□ 0.28
IRF3-218ENST00000597369 RBM5P52756 815 aaKnown RBP eCLIP16.79■□□□□ 0.28
IRF3-218ENST00000597369 PPATQ06203 517 aa16.79■□□□□ 0.28
IRF3-218ENST00000597369 KRT24Q2M2I5 525 aa16.79■□□□□ 0.28
IRF3-218ENST00000597369 NBPF3Q9H094 633 aa16.79■□□□□ 0.28
IRF3-218ENST00000597369 CWC25Q9NXE8 425 aaPredicted RBP16.79■□□□□ 0.28
IRF3-218ENST00000597369 IL1R1P14778 569 aa16.78■□□□□ 0.28
IRF3-218ENST00000597369 ELNP15502 786 aa16.78■□□□□ 0.28
IRF3-218ENST00000597369 FLT3LGP49771 235 aa16.78■□□□□ 0.28
IRF3-218ENST00000597369 C15orf52Q6ZUT6 534 aaKnown RBP16.78■□□□□ 0.28
IRF3-218ENST00000597369 JARID2Q92833 1246 aaPredicted RBP16.78■□□□□ 0.28
IRF3-218ENST00000597369 FAM161BQ96MY7 647 aa16.78■□□□□ 0.28
IRF3-218ENST00000597369 CDX2Q99626 313 aaPredicted RBP16.78■□□□□ 0.28
IRF3-218ENST00000597369 TMEM39BQ9GZU3 492 aa16.78■□□□□ 0.28
IRF3-218ENST00000597369 GREM2Q9H772 168 aa16.78■□□□□ 0.28
IRF3-218ENST00000597369 BDP1A6H8Y1 2624 aa16.77■□□□□ 0.28
IRF3-218ENST00000597369 CHL1O00533 1208 aa16.77■□□□□ 0.28
IRF3-218ENST00000597369 TNNI2P48788 182 aa16.77■□□□□ 0.28
IRF3-218ENST00000597369 ZNF697Q5TEC3 545 aa16.77■□□□□ 0.28
IRF3-218ENST00000597369 MYD88Q99836 296 aa16.77■□□□□ 0.28
IRF3-218ENST00000597369 TDRD3Q9H7E2 651 aaKnown RBP16.77■□□□□ 0.28
IRF3-218ENST00000597369 SERPINA10Q9UK55 444 aa16.77■□□□□ 0.28
IRF3-218ENST00000597369 MAPK8IP3Q9UPT6 1336 aa16.76■□□□□ 0.27
IRF3-218ENST00000597369 IGHMBP2P38935 993 aaKnown RBP16.76■□□□□ 0.27
IRF3-218ENST00000597369 GOLGA2Q08379 1002 aa16.76■□□□□ 0.27
IRF3-218ENST00000597369 ZKSCAN4Q969J2 545 aaPredicted RBP16.76■□□□□ 0.27
IRF3-218ENST00000597369 DNAH12Q6ZR08 3092 aa16.76■□□□□ 0.27
IRF3-218ENST00000597369 DDX60LQ5H9U9 1706 aaKnown RBP16.76■□□□□ 0.27
IRF3-218ENST00000597369 RIPK4P57078 832 aa16.75■□□□□ 0.27
IRF3-218ENST00000597369 MOGSQ13724 837 aa16.75■□□□□ 0.27
IRF3-218ENST00000597369 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.75■□□□□ 0.27
IRF3-218ENST00000597369 WRNIP1Q96S55 665 aa16.75■□□□□ 0.27
IRF3-218ENST00000597369 KCNH4Q9UQ05 1017 aa16.75■□□□□ 0.27
IRF3-218ENST00000597369 TCP10L2B9ZVM9 353 aa16.74■□□□□ 0.27
IRF3-218ENST00000597369 DZIP1LQ8IYY4 767 aaKnown RBP16.74■□□□□ 0.27
IRF3-218ENST00000597369 PARK7Q99497 189 aaKnown RBP16.74■□□□□ 0.27
IRF3-218ENST00000597369 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.74■□□□□ 0.273e-13■■□□□ 12.4
IRF3-218ENST00000597369 C11orf49Q9H6J7 331 aa16.74■□□□□ 0.27
IRF3-218ENST00000597369 PIEZO1Q92508 2521 aa16.74■□□□□ 0.27
IRF3-218ENST00000597369 KCNJ4P48050 445 aa16.73■□□□□ 0.27
IRF3-218ENST00000597369 TJAP1Q5JTD0 557 aa16.73■□□□□ 0.27
IRF3-218ENST00000597369 HOOK2Q96ED9 719 aa16.73■□□□□ 0.27
IRF3-218ENST00000597369 SEMA6BQ9H3T3 888 aa16.73■□□□□ 0.27
IRF3-218ENST00000597369 LMOD3Q0VAK6 560 aa16.72■□□□□ 0.27
IRF3-218ENST00000597369 METTL22Q9BUU2 404 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms