RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 PA2G4Q9UQ80 394 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-213ENST00000597325 APBB1O00213 710 aa14.84□□□□□ -0.03
SHKBP1-213ENST00000597325 IGF2BP3O00425 579 aaKnown RBP eCLIP14.84□□□□□ -0.03
SHKBP1-213ENST00000597325 RAB11FIP3O75154 756 aa14.84□□□□□ -0.03
SHKBP1-213ENST00000597325 IGHMBP2P38935 993 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-213ENST00000597325 INHBEP58166 350 aa14.84□□□□□ -0.03
SHKBP1-213ENST00000597325 KLHDC4Q8TBB5 520 aa14.84□□□□□ -0.03
SHKBP1-213ENST00000597325 SPEF2Q9C093 1822 aa14.84□□□□□ -0.03
SHKBP1-213ENST00000597325 RIMBP2O15034 1052 aa14.83□□□□□ -0.04
SHKBP1-213ENST00000597325 DOK7Q18PE1 504 aa14.83□□□□□ -0.04
SHKBP1-213ENST00000597325 SLC4A8Q2Y0W8 1093 aa14.83□□□□□ -0.04
SHKBP1-213ENST00000597325 LDLRAD1Q5T700 205 aa14.83□□□□□ -0.04
SHKBP1-213ENST00000597325 TMC4Q7Z404 712 aa14.83□□□□□ -0.04
SHKBP1-213ENST00000597325 ANKRD18AQ8IVF6 992 aa14.83□□□□□ -0.04
SHKBP1-213ENST00000597325 ZNF594Q96JF6 807 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-213ENST00000597325 MPHOSPH8Q99549 860 aa14.83□□□□□ -0.04
SHKBP1-213ENST00000597325 FBXO3Q9UK99 471 aa14.83□□□□□ -0.04
SHKBP1-213ENST00000597325 NOP58Q9Y2X3 529 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-213ENST00000597325 MANSC4A6NHS7 340 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-213ENST00000597325 WTIPA6NIX2 430 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-213ENST00000597325 CIAO1O76071 339 aa14.82□□□□□ -0.04
SHKBP1-213ENST00000597325 TTLL12Q14166 644 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-213ENST00000597325 SLC9C1Q4G0N8 1177 aa14.82□□□□□ -0.04
SHKBP1-213ENST00000597325 LDHAL6AQ6ZMR3 332 aa14.82□□□□□ -0.04
SHKBP1-213ENST00000597325 NBPF11Q86T75 865 aa14.82□□□□□ -0.04
SHKBP1-213ENST00000597325 AGBL3Q8NEM8 1001 aa14.82□□□□□ -0.04
SHKBP1-213ENST00000597325 KIF1BPQ96EK5 621 aa14.82□□□□□ -0.04
SHKBP1-213ENST00000597325 GMLQ99445 158 aa14.82□□□□□ -0.04
SHKBP1-213ENST00000597325 LRRCC1Q9C099 1032 aa14.82□□□□□ -0.04
SHKBP1-213ENST00000597325 MYOZ2Q9NPC6 264 aa14.82□□□□□ -0.04
SHKBP1-213ENST00000597325 SEC31BQ9NQW1 1179 aa14.82□□□□□ -0.04
SHKBP1-213ENST00000597325 CNNM1Q9NRU3 951 aa14.82□□□□□ -0.04
SHKBP1-213ENST00000597325 PSME4Q14997 1843 aa14.82□□□□□ -0.04
SHKBP1-213ENST00000597325 EYA2O00167 538 aa14.81□□□□□ -0.04
SHKBP1-213ENST00000597325 IL15P40933 162 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-213ENST00000597325 SP3Q02447 781 aa14.81□□□□□ -0.04
SHKBP1-213ENST00000597325 ANKRD45Q5TZF3 282 aa14.81□□□□□ -0.04
SHKBP1-213ENST00000597325 DPF3Q92784 378 aa14.81□□□□□ -0.04
SHKBP1-213ENST00000597325 SHISA4Q96DD7 197 aa14.81□□□□□ -0.04
SHKBP1-213ENST00000597325 STXBP5LQ9Y2K9 1186 aa14.81□□□□□ -0.04
SHKBP1-213ENST00000597325 PTCH2Q9Y6C5 1203 aa14.81□□□□□ -0.04
SHKBP1-213ENST00000597325 NUCB1Q02818 461 aa14.8□□□□□ -0.04
SHKBP1-213ENST00000597325 CRHR2Q13324 411 aa14.8□□□□□ -0.04
SHKBP1-213ENST00000597325 GPR153Q6NV75 609 aa14.8□□□□□ -0.04
SHKBP1-213ENST00000597325 RSBN1LQ6PCB5 846 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-213ENST00000597325 UBE2Q1Q7Z7E8 422 aa14.8□□□□□ -0.04
SHKBP1-213ENST00000597325 BCL11AQ9H165 835 aa14.8□□□□□ -0.04
SHKBP1-213ENST00000597325 NSFL1CQ9UNZ2 370 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-213ENST00000597325 COL4A1P02462 1669 aa14.8□□□□□ -0.04
SHKBP1-213ENST00000597325 ZNF646O15015 1829 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-213ENST00000597325 METTL24Q5JXM2 366 aa14.79□□□□□ -0.04
SHKBP1-213ENST00000597325 MROH5Q6ZUA9 1318 aa14.79□□□□□ -0.04
SHKBP1-213ENST00000597325 CHD1LQ86WJ1 897 aa14.79□□□□□ -0.04
SHKBP1-213ENST00000597325 RHPN1Q8TCX5 695 aa14.79□□□□□ -0.04
SHKBP1-213ENST00000597325 PRDM6Q9NQX0 595 aa14.79□□□□□ -0.04
SHKBP1-213ENST00000597325 C6orf229H3BNL8 230 aa14.78□□□□□ -0.04
SHKBP1-213ENST00000597325 ZBTB48P10074 688 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-213ENST00000597325 NF2P35240 595 aa14.78□□□□□ -0.04
SHKBP1-213ENST00000597325 RPS8P62241 208 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-213ENST00000597325 GPSM2P81274 684 aa14.78□□□□□ -0.04
SHKBP1-213ENST00000597325 NBPF9Q3BBW0 867 aa14.78□□□□□ -0.04
SHKBP1-213ENST00000597325 LRRC24Q50LG9 513 aa14.78□□□□□ -0.04
SHKBP1-213ENST00000597325 CELF1Q92879 486 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-213ENST00000597325 PUS3Q9BZE2 481 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-213ENST00000597325 LNPKQ9C0E8 428 aa14.78□□□□□ -0.04
SHKBP1-213ENST00000597325 BSDC1Q9NW68 430 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-213ENST00000597325 CEP126Q9P2H0 1117 aa14.78□□□□□ -0.04
SHKBP1-213ENST00000597325 SMARCA5O60264 1052 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-213ENST00000597325 USP17L8P0C7I0 530 aa14.77□□□□□ -0.05
SHKBP1-213ENST00000597325 ATG9AQ7Z3C6 839 aa14.77□□□□□ -0.05
SHKBP1-213ENST00000597325 ARMC9Q7Z3E5 817 aa14.77□□□□□ -0.05
SHKBP1-213ENST00000597325 CLASRPQ8N2M8 674 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-213ENST00000597325 TBC1D16Q8TBP0 767 aa14.77□□□□□ -0.05
SHKBP1-213ENST00000597325 EYA3Q99504 573 aa14.77□□□□□ -0.05
SHKBP1-213ENST00000597325 SASH1O94885 1247 aa14.76□□□□□ -0.05
SHKBP1-213ENST00000597325 MYCP01106 439 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-213ENST00000597325 TFCP2Q12800 502 aa14.76□□□□□ -0.05
SHKBP1-213ENST00000597325 DEFB123Q8N688 67 aa14.76□□□□□ -0.05
SHKBP1-213ENST00000597325 PTPN18Q99952 460 aa14.76□□□□□ -0.05
SHKBP1-213ENST00000597325 IL1RAPL2Q9NP60 686 aa14.76□□□□□ -0.05
SHKBP1-213ENST00000597325 AKAP2Q9Y2D5 859 aa14.76□□□□□ -0.05
SHKBP1-213ENST00000597325 RIPOR2Q9Y4F9 1068 aa14.76□□□□□ -0.05
SHKBP1-213ENST00000597325 A0A1B0GUL6 1792 aa14.75□□□□□ -0.05
SHKBP1-213ENST00000597325 IFIT2P09913 472 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-213ENST00000597325 PRKG1Q13976 671 aa14.75□□□□□ -0.05
SHKBP1-213ENST00000597325 MAP3K11Q16584 847 aa14.75□□□□□ -0.05
SHKBP1-213ENST00000597325 Q7L0L9 218 aa14.75□□□□□ -0.05
SHKBP1-213ENST00000597325 AACSQ86V21 672 aa14.75□□□□□ -0.05
SHKBP1-213ENST00000597325 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.75□□□□□ -0.05
SHKBP1-213ENST00000597325 SH3TC2Q8TF17 1288 aa14.75□□□□□ -0.05
SHKBP1-213ENST00000597325 WNK4Q96J92 1243 aa14.75□□□□□ -0.05
SHKBP1-213ENST00000597325 FZD1Q9UP38 647 aa14.75□□□□□ -0.05
SHKBP1-213ENST00000597325 CDH23Q9H251 3354 aa14.74□□□□□ -0.05
SHKBP1-213ENST00000597325 WNT10BO00744 389 aa14.74□□□□□ -0.05
SHKBP1-213ENST00000597325 CHRNDQ07001 517 aa14.74□□□□□ -0.05
SHKBP1-213ENST00000597325 GPATCH3Q96I76 525 aa14.74□□□□□ -0.05
SHKBP1-213ENST00000597325 ANKRD2Q9GZV1 360 aa14.74□□□□□ -0.05
SHKBP1-213ENST00000597325 MTMR10Q9NXD2 777 aa14.74□□□□□ -0.05
SHKBP1-213ENST00000597325 ANGEL1Q9UNK9 670 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-213ENST00000597325 NR2E3Q9Y5X4 410 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms