RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 ANKRD13AQ8IZ07 590 aa17.53■□□□□ 0.4
C19orf54-206ENST00000596940 LPIN2Q92539 896 aa17.53■□□□□ 0.4
C19orf54-206ENST00000596940 TEKT1Q969V4 418 aa17.53■□□□□ 0.4
C19orf54-206ENST00000596940 CFHR5Q9BXR6 569 aa17.53■□□□□ 0.4
C19orf54-206ENST00000596940 TDRD3Q9H7E2 651 aaKnown RBP17.53■□□□□ 0.4
C19orf54-206ENST00000596940 BCAMP50895 628 aa17.52■□□□□ 0.4
C19orf54-206ENST00000596940 NBPF12Q5TAG4 269 aaPredicted RBP17.52■□□□□ 0.4
C19orf54-206ENST00000596940 OTUD7BQ6GQQ9 843 aa17.52■□□□□ 0.4
C19orf54-206ENST00000596940 KLHDC4Q8TBB5 520 aa17.52■□□□□ 0.4
C19orf54-206ENST00000596940 TMOD2Q9NZR1 351 aa17.52■□□□□ 0.4
C19orf54-206ENST00000596940 IQSEC3Q9UPP2 1182 aaPredicted RBP17.52■□□□□ 0.4
C19orf54-206ENST00000596940 CIAO1O76071 339 aa17.51■□□□□ 0.39
C19orf54-206ENST00000596940 FGFR2P21802 821 aa17.51■□□□□ 0.39
C19orf54-206ENST00000596940 WDR66Q8TBY9 1149 aa17.51■□□□□ 0.39
C19orf54-206ENST00000596940 ARHGAP45Q92619 1136 aa17.51■□□□□ 0.39
C19orf54-206ENST00000596940 HOOK2Q96ED9 719 aa17.51■□□□□ 0.39
C19orf54-206ENST00000596940 GNL3LQ9NVN8 582 aaKnown RBP17.51■□□□□ 0.39
C19orf54-206ENST00000596940 CEP126Q9P2H0 1117 aa17.51■□□□□ 0.39
C19orf54-206ENST00000596940 CASP8AP2Q9UKL3 1982 aa17.5■□□□□ 0.39
C19orf54-206ENST00000596940 GPR25O00155 361 aa17.5■□□□□ 0.39
C19orf54-206ENST00000596940 IPO8O15397 1037 aaKnown RBP17.5■□□□□ 0.39
C19orf54-206ENST00000596940 USP2O75604 605 aaPredicted RBP17.5■□□□□ 0.39
C19orf54-206ENST00000596940 RFX5P48382 616 aaPredicted RBP17.5■□□□□ 0.39
C19orf54-206ENST00000596940 ZNF296Q8WUU4 475 aaPredicted RBP17.5■□□□□ 0.39
C19orf54-206ENST00000596940 ZNF646O15015 1829 aaPredicted RBP17.49■□□□□ 0.39
C19orf54-206ENST00000596940 TCP10L2B9ZVM9 353 aa17.49■□□□□ 0.39
C19orf54-206ENST00000596940 FKTNO75072 461 aa17.49■□□□□ 0.39
C19orf54-206ENST00000596940 RARSP54136 660 aaKnown RBP17.49■□□□□ 0.39
C19orf54-206ENST00000596940 FKBP1CQ5VVH2 108 aa17.49■□□□□ 0.39
C19orf54-206ENST00000596940 WNK4Q96J92 1243 aa17.49■□□□□ 0.39
C19orf54-206ENST00000596940 ZDHHC15Q96MV8 337 aa17.49■□□□□ 0.39
C19orf54-206ENST00000596940 FZD1Q9UP38 647 aa17.49■□□□□ 0.39
C19orf54-206ENST00000596940 GNAI3P08754 354 aa17.48■□□□□ 0.39
C19orf54-206ENST00000596940 IL15P40933 162 aaPredicted RBP17.48■□□□□ 0.39
C19orf54-206ENST00000596940 HHIPL2Q6UWX4 724 aa17.48■□□□□ 0.39
C19orf54-206ENST00000596940 IFNL1Q8IU54 200 aa17.48■□□□□ 0.39
C19orf54-206ENST00000596940 CLMNQ96JQ2 1002 aa17.48■□□□□ 0.39
C19orf54-206ENST00000596940 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.48■□□□□ 0.39
C19orf54-206ENST00000596940 AOX1Q06278 1338 aa17.47■□□□□ 0.39
C19orf54-206ENST00000596940 ATP2B3Q16720 1220 aa17.47■□□□□ 0.39
C19orf54-206ENST00000596940 ATG9AQ7Z3C6 839 aa17.47■□□□□ 0.39
C19orf54-206ENST00000596940 FAM83AQ86UY5 434 aa17.47■□□□□ 0.39
C19orf54-206ENST00000596940 AKAP11Q9UKA4 1901 aa17.47■□□□□ 0.39
C19orf54-206ENST00000596940 SEMA3EO15041 775 aa17.46■□□□□ 0.39
C19orf54-206ENST00000596940 MAP3K9P80192 1104 aa17.46■□□□□ 0.39
C19orf54-206ENST00000596940 INTS3Q68E01 1043 aaKnown RBP17.46■□□□□ 0.39
C19orf54-206ENST00000596940 TEPSINQ96N21 525 aa17.46■□□□□ 0.39
C19orf54-206ENST00000596940 TMEM39BQ9GZU3 492 aa17.46■□□□□ 0.39
C19orf54-206ENST00000596940 SIL1Q9H173 461 aa17.46■□□□□ 0.39
C19orf54-206ENST00000596940 CSADQ9Y600 493 aa17.46■□□□□ 0.39
C19orf54-206ENST00000596940 LRRFIP2Q9Y608 721 aaKnown RBP17.46■□□□□ 0.39
C19orf54-206ENST00000596940 SSC5DA1L4H1 1573 aa17.45■□□□□ 0.38
C19orf54-206ENST00000596940 GRIK5Q16478 980 aa17.45■□□□□ 0.38
C19orf54-206ENST00000596940 COPRSQ9NQ92 184 aa17.45■□□□□ 0.38
C19orf54-206ENST00000596940 WDHD1O75717 1129 aaPredicted RBP17.44■□□□□ 0.38
C19orf54-206ENST00000596940 DCAF15Q66K64 600 aa17.44■□□□□ 0.38
C19orf54-206ENST00000596940 APOBEC3HQ6NTF7 200 aaKnown RBP17.44■□□□□ 0.38
C19orf54-206ENST00000596940 ELP3Q9H9T3 547 aa17.44■□□□□ 0.38
C19orf54-206ENST00000596940 DENND2AQ9ULE3 1009 aa17.44■□□□□ 0.38
C19orf54-206ENST00000596940 HPS5Q9UPZ3 1129 aa17.44■□□□□ 0.38
C19orf54-206ENST00000596940 A0A1B0GUL6 1792 aa17.43■□□□□ 0.38
C19orf54-206ENST00000596940 TESPA1A2RU30 521 aaPredicted RBP17.43■□□□□ 0.38
C19orf54-206ENST00000596940 ZBTB22O15209 634 aa17.43■□□□□ 0.38
C19orf54-206ENST00000596940 LDHBP07195 334 aaKnown RBP17.43■□□□□ 0.38
C19orf54-206ENST00000596940 GTF2A2P52657 109 aa17.43■□□□□ 0.38
C19orf54-206ENST00000596940 FBXO46Q6PJ61 603 aaPredicted RBP17.43■□□□□ 0.38
C19orf54-206ENST00000596940 ZGPATQ8N5A5 531 aaKnown RBP17.43■□□□□ 0.38
C19orf54-206ENST00000596940 OPTNQ96CV9 577 aa17.43■□□□□ 0.38
C19orf54-206ENST00000596940 AKAP2Q9Y2D5 859 aa17.43■□□□□ 0.38
C19orf54-206ENST00000596940 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.42■□□□□ 0.38
C19orf54-206ENST00000596940 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.42■□□□□ 0.38
C19orf54-206ENST00000596940 MEIS3Q99687 375 aa17.42■□□□□ 0.38
C19orf54-206ENST00000596940 IGF2BP3O00425 579 aaKnown RBP eCLIP17.41■□□□□ 0.38
C19orf54-206ENST00000596940 SRGAP3O43295 1099 aa17.41■□□□□ 0.38
C19orf54-206ENST00000596940 CACNB3P54284 484 aa17.41■□□□□ 0.38
C19orf54-206ENST00000596940 VGLL4Q14135 290 aa17.41■□□□□ 0.38
C19orf54-206ENST00000596940 ARHGEF6Q15052 776 aa17.41■□□□□ 0.38
C19orf54-206ENST00000596940 ERO1AQ96HE7 468 aa17.41■□□□□ 0.38
C19orf54-206ENST00000596940 SALL1Q9NSC2 1324 aa17.41■□□□□ 0.38
C19orf54-206ENST00000596940 GJA5P36382 358 aa17.4■□□□□ 0.38
C19orf54-206ENST00000596940 MTX1Q13505 466 aa17.4■□□□□ 0.38
C19orf54-206ENST00000596940 ATF7IPQ6VMQ6 1270 aa17.4■□□□□ 0.38
C19orf54-206ENST00000596940 ERO1BQ86YB8 467 aa17.4■□□□□ 0.38
C19orf54-206ENST00000596940 SLF2Q8IX21 1173 aa17.4■□□□□ 0.38
C19orf54-206ENST00000596940 FAM151AQ8WW52 585 aa17.4■□□□□ 0.38
C19orf54-206ENST00000596940 FRAT1Q92837 279 aaPredicted RBP17.4■□□□□ 0.38
C19orf54-206ENST00000596940 R3HDMLQ9H3Y0 253 aa17.4■□□□□ 0.38
C19orf54-206ENST00000596940 PA2G4Q9UQ80 394 aaKnown RBP17.4■□□□□ 0.38
C19orf54-206ENST00000596940 GNAI2P04899 355 aa17.39■□□□□ 0.37
C19orf54-206ENST00000596940 MVPQ14764 893 aaKnown RBP17.39■□□□□ 0.37
C19orf54-206ENST00000596940 SPTY2D1Q68D10 685 aaPredicted RBP17.39■□□□□ 0.37
C19orf54-206ENST00000596940 CCDC102BQ68D86 513 aa17.39■□□□□ 0.37
C19orf54-206ENST00000596940 CDAN1Q8IWY9 1227 aa17.39■□□□□ 0.37
C19orf54-206ENST00000596940 MS4A4AQ96JQ5 239 aa17.39■□□□□ 0.37
C19orf54-206ENST00000596940 WRNIP1Q96S55 665 aa17.39■□□□□ 0.37
C19orf54-206ENST00000596940 ZNF341Q9BYN7 854 aa17.39■□□□□ 0.37
C19orf54-206ENST00000596940 RPAP1Q9BWH6 1393 aaPredicted RBP17.39■□□□□ 0.37
C19orf54-206ENST00000596940 CCL15-CCL14A0A0B4J2E2 113 aa17.38■□□□□ 0.37
C19orf54-206ENST00000596940 SPDYE5A6NIY4 337 aa17.38■□□□□ 0.37
C19orf54-206ENST00000596940 CETPP11597 493 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms