RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 FBXO3Q9UK99 471 aa22.37■■□□□ 1.17
HOMER3-208ENST00000595756 NOB1Q9ULX3 412 aaKnown RBP22.37■■□□□ 1.17
HOMER3-208ENST00000595756 IQSEC3Q9UPP2 1182 aaPredicted RBP22.37■■□□□ 1.17
HOMER3-208ENST00000595756 FRAT2O75474 233 aaPredicted RBP22.36■■□□□ 1.17
HOMER3-208ENST00000595756 IREB2P48200 963 aaKnown RBP22.36■■□□□ 1.17
HOMER3-208ENST00000595756 CHAF1AQ13111 956 aaPredicted RBP22.36■■□□□ 1.17
HOMER3-208ENST00000595756 NBPF12Q5TAG4 269 aaPredicted RBP22.36■■□□□ 1.17
HOMER3-208ENST00000595756 CTU1Q7Z7A3 348 aaKnown RBP22.36■■□□□ 1.17
HOMER3-208ENST00000595756 SUGT1Q9Y2Z0 365 aa22.36■■□□□ 1.17
HOMER3-208ENST00000595756 MAST3O60307 1309 aa22.35■■□□□ 1.17
HOMER3-208ENST00000595756 SLC5A1P13866 664 aa22.35■■□□□ 1.17
HOMER3-208ENST00000595756 BCAMP50895 628 aa22.35■■□□□ 1.17
HOMER3-208ENST00000595756 GRIK5Q16478 980 aa22.35■■□□□ 1.17
HOMER3-208ENST00000595756 LPIN2Q92539 896 aa22.35■■□□□ 1.17
HOMER3-208ENST00000595756 TDRD3Q9H7E2 651 aaKnown RBP22.35■■□□□ 1.17
HOMER3-208ENST00000595756 HDAC5Q9UQL6 1122 aa22.35■■□□□ 1.17
HOMER3-208ENST00000595756 MANSC4A6NHS7 340 aaPredicted RBP22.34■■□□□ 1.17
HOMER3-208ENST00000595756 CIAO1O76071 339 aa22.34■■□□□ 1.17
HOMER3-208ENST00000595756 RGS19P49795 217 aa22.34■■□□□ 1.17
HOMER3-208ENST00000595756 RARSP54136 660 aaKnown RBP22.34■■□□□ 1.17
HOMER3-208ENST00000595756 ATG9AQ7Z3C6 839 aa22.34■■□□□ 1.17
HOMER3-208ENST00000595756 TEKT1Q969V4 418 aa22.34■■□□□ 1.17
HOMER3-208ENST00000595756 SLC10A4Q96EP9 437 aa22.34■■□□□ 1.17
HOMER3-208ENST00000595756 WNK4Q96J92 1243 aa22.34■■□□□ 1.17
HOMER3-208ENST00000595756 CLMNQ96JQ2 1002 aa22.34■■□□□ 1.17
HOMER3-208ENST00000595756 TBC1D8O95759 1140 aa22.33■■□□□ 1.17
HOMER3-208ENST00000595756 ALDH1A1P00352 501 aa22.33■■□□□ 1.17
HOMER3-208ENST00000595756 TNNI2P48788 182 aa22.33■■□□□ 1.17
HOMER3-208ENST00000595756 ANKRD13AQ8IZ07 590 aa22.33■■□□□ 1.17
HOMER3-208ENST00000595756 USP2O75604 605 aaPredicted RBP22.32■■□□□ 1.16
HOMER3-208ENST00000595756 INHBEP58166 350 aa22.32■■□□□ 1.16
HOMER3-208ENST00000595756 ZNF296Q8WUU4 475 aaPredicted RBP22.32■■□□□ 1.16
HOMER3-208ENST00000595756 ARHGAP45Q92619 1136 aa22.32■■□□□ 1.16
HOMER3-208ENST00000595756 TEPSINQ96N21 525 aa22.32■■□□□ 1.16
HOMER3-208ENST00000595756 MRIQ9BWK5 157 aa22.32■■□□□ 1.16
HOMER3-208ENST00000595756 LRRFIP2Q9Y608 721 aaKnown RBP22.32■■□□□ 1.16
HOMER3-208ENST00000595756 ZDHHC15Q96MV8 337 aa22.31■■□□□ 1.16
HOMER3-208ENST00000595756 TNRC18O15417 2968 aaPredicted RBP22.31■■□□□ 1.16
HOMER3-208ENST00000595756 HTTP42858 3142 aa22.31■■□□□ 1.16
HOMER3-208ENST00000595756 RPAP1Q9BWH6 1393 aaPredicted RBP22.3■■□□□ 1.16
HOMER3-208ENST00000595756 TCP10L2B9ZVM9 353 aa22.3■■□□□ 1.16
HOMER3-208ENST00000595756 GPR25O00155 361 aa22.3■■□□□ 1.16
HOMER3-208ENST00000595756 WDR66Q8TBY9 1149 aa22.3■■□□□ 1.16
HOMER3-208ENST00000595756 PKN2Q16513 984 aaKnown RBP22.29■■□□□ 1.16
HOMER3-208ENST00000595756 ATP2B3Q16720 1220 aa22.29■■□□□ 1.16
HOMER3-208ENST00000595756 INTS3Q68E01 1043 aaKnown RBP22.29■■□□□ 1.16
HOMER3-208ENST00000595756 IFNL1Q8IU54 200 aa22.29■■□□□ 1.16
HOMER3-208ENST00000595756 CDAN1Q8IWY9 1227 aa22.29■■□□□ 1.16
HOMER3-208ENST00000595756 MEIS3Q99687 375 aa22.29■■□□□ 1.16
HOMER3-208ENST00000595756 TMEM39BQ9GZU3 492 aa22.29■■□□□ 1.16
HOMER3-208ENST00000595756 SIL1Q9H173 461 aa22.29■■□□□ 1.16
HOMER3-208ENST00000595756 IL15P40933 162 aaPredicted RBP22.28■■□□□ 1.16
HOMER3-208ENST00000595756 MLLT1Q03111 559 aaPredicted RBP22.28■■□□□ 1.16
HOMER3-208ENST00000595756 FKBP1CQ5VVH2 108 aa22.28■■□□□ 1.16
HOMER3-208ENST00000595756 HHIPL2Q6UWX4 724 aa22.28■■□□□ 1.16
HOMER3-208ENST00000595756 COPRSQ9NQ92 184 aa22.28■■□□□ 1.16
HOMER3-208ENST00000595756 TMOD2Q9NZR1 351 aa22.28■■□□□ 1.16
HOMER3-208ENST00000595756 CEP126Q9P2H0 1117 aa22.28■■□□□ 1.16
HOMER3-208ENST00000595756 ZBTB22O15209 634 aa22.27■■□□□ 1.16
HOMER3-208ENST00000595756 GJA5P36382 358 aa22.27■■□□□ 1.16
HOMER3-208ENST00000595756 APOBEC3HQ6NTF7 200 aaKnown RBP22.27■■□□□ 1.16
HOMER3-208ENST00000595756 FAM83AQ86UY5 434 aa22.27■■□□□ 1.16
HOMER3-208ENST00000595756 IGF2BP3O00425 579 aaKnown RBP eCLIP22.26■■□□□ 1.15
HOMER3-208ENST00000595756 FKTNO75072 461 aa22.26■■□□□ 1.15
HOMER3-208ENST00000595756 GNAI3P08754 354 aa22.26■■□□□ 1.15
HOMER3-208ENST00000595756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.26■■□□□ 1.15
HOMER3-208ENST00000595756 SEMA3EO15041 775 aa22.25■■□□□ 1.15
HOMER3-208ENST00000595756 ELP3Q9H9T3 547 aa22.25■■□□□ 1.15
HOMER3-208ENST00000595756 GNL3LQ9NVN8 582 aaKnown RBP22.25■■□□□ 1.15
HOMER3-208ENST00000595756 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.25■■□□□ 1.15
HOMER3-208ENST00000595756 PA2G4Q9UQ80 394 aaKnown RBP22.25■■□□□ 1.15
HOMER3-208ENST00000595756 SALL1Q9NSC2 1324 aa22.25■■□□□ 1.15
HOMER3-208ENST00000595756 TESPA1A2RU30 521 aaPredicted RBP22.24■■□□□ 1.15
HOMER3-208ENST00000595756 CACNB3P54284 484 aa22.24■■□□□ 1.15
HOMER3-208ENST00000595756 MTX1Q13505 466 aa22.24■■□□□ 1.15
HOMER3-208ENST00000595756 VGLL4Q14135 290 aa22.24■■□□□ 1.15
HOMER3-208ENST00000595756 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.24■■□□□ 1.15
HOMER3-208ENST00000595756 OPTNQ96CV9 577 aa22.24■■□□□ 1.15
HOMER3-208ENST00000595756 HOOK2Q96ED9 719 aa22.24■■□□□ 1.15
HOMER3-208ENST00000595756 R3HDMLQ9H3Y0 253 aa22.24■■□□□ 1.15
HOMER3-208ENST00000595756 HPS5Q9UPZ3 1129 aa22.24■■□□□ 1.15
HOMER3-208ENST00000595756 IPO8O15397 1037 aaKnown RBP22.23■■□□□ 1.15
HOMER3-208ENST00000595756 TRIM27P14373 513 aa22.23■■□□□ 1.15
HOMER3-208ENST00000595756 OTUD7BQ6GQQ9 843 aa22.23■■□□□ 1.15
HOMER3-208ENST00000595756 DENND2AQ9ULE3 1009 aa22.23■■□□□ 1.15
HOMER3-208ENST00000595756 CSADQ9Y600 493 aa22.23■■□□□ 1.15
HOMER3-208ENST00000595756 MYH2Q9UKX2 1941 aa22.22■■□□□ 1.15
HOMER3-208ENST00000595756 MAP3K9P80192 1104 aa22.22■■□□□ 1.15
HOMER3-208ENST00000595756 DAGLAQ9Y4D2 1042 aa22.22■■□□□ 1.15
HOMER3-208ENST00000595756 PDS5AQ29RF7 1337 aaKnown RBP22.22■■□□□ 1.15
HOMER3-208ENST00000595756 DOCK2Q92608 1830 aa22.22■■□□□ 1.15
HOMER3-208ENST00000595756 CENPFP49454 3210 aa22.21■■□□□ 1.15
HOMER3-208ENST00000595756 PRDX5P30044 214 aa22.21■■□□□ 1.15
HOMER3-208ENST00000595756 PHKA1P46020 1223 aa22.21■■□□□ 1.15
HOMER3-208ENST00000595756 FBXO46Q6PJ61 603 aaPredicted RBP22.21■■□□□ 1.15
HOMER3-208ENST00000595756 ATF7IPQ6VMQ6 1270 aa22.21■■□□□ 1.15
HOMER3-208ENST00000595756 SRGAP3O43295 1099 aa22.2■■□□□ 1.14
HOMER3-208ENST00000595756 LDHBP07195 334 aaKnown RBP22.2■■□□□ 1.14
HOMER3-208ENST00000595756 MS4A4AQ96JQ5 239 aa22.2■■□□□ 1.14
HOMER3-208ENST00000595756 YTHDC1Q96MU7 727 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms