RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 DGKZQ13574 1117 aa19.68■□□□□ 0.74
USHBP1-204ENST00000594190 NBPF9Q3BBW0 867 aa19.68■□□□□ 0.74
USHBP1-204ENST00000594190 TTC22Q5TAA0 569 aa19.68■□□□□ 0.74
USHBP1-204ENST00000594190 SULF1Q8IWU6 871 aa19.68■□□□□ 0.74
USHBP1-204ENST00000594190 SIL1Q9H173 461 aa19.68■□□□□ 0.74
USHBP1-204ENST00000594190 CD209Q9NNX6 404 aa19.68■□□□□ 0.74
USHBP1-204ENST00000594190 TAF5LO75529 589 aa19.67■□□□□ 0.74
USHBP1-204ENST00000594190 SASH1O94885 1247 aa19.67■□□□□ 0.74
USHBP1-204ENST00000594190 IFIT2P09913 472 aaKnown RBP19.67■□□□□ 0.74
USHBP1-204ENST00000594190 MMP14P50281 582 aa19.67■□□□□ 0.74
USHBP1-204ENST00000594190 NOGQ13253 232 aa19.67■□□□□ 0.74
USHBP1-204ENST00000594190 RGMBQ6NW40 437 aa19.67■□□□□ 0.74
USHBP1-204ENST00000594190 IL1RAPL2Q9NP60 686 aa19.67■□□□□ 0.74
USHBP1-204ENST00000594190 ERC2O15083 957 aa19.66■□□□□ 0.74
USHBP1-204ENST00000594190 IL1R1P14778 569 aa19.66■□□□□ 0.74
USHBP1-204ENST00000594190 TTLL5Q6EMB2 1281 aa19.66■□□□□ 0.74
USHBP1-204ENST00000594190 CERS5Q8N5B7 392 aa19.66■□□□□ 0.74
USHBP1-204ENST00000594190 C2orf69Q8N8R5 385 aa19.66■□□□□ 0.74
USHBP1-204ENST00000594190 ZNF594Q96JF6 807 aaPredicted RBP19.66■□□□□ 0.74
USHBP1-204ENST00000594190 HELBQ8NG08 1087 aaPredicted RBP19.65■□□□□ 0.74
USHBP1-204ENST00000594190 KLHDC4Q8TBB5 520 aa19.65■□□□□ 0.74
USHBP1-204ENST00000594190 SCAF8Q9UPN6 1271 aaKnown RBP19.65■□□□□ 0.74
USHBP1-204ENST00000594190 AKAP2Q9Y2D5 859 aa19.65■□□□□ 0.74
USHBP1-204ENST00000594190 SLC10A3P09131 477 aa19.64■□□□□ 0.73
USHBP1-204ENST00000594190 GTF2IP78347 998 aa19.64■□□□□ 0.73
USHBP1-204ENST00000594190 C8orf34Q49A92 452 aa19.64■□□□□ 0.73
USHBP1-204ENST00000594190 ATG9AQ7Z3C6 839 aa19.64■□□□□ 0.73
USHBP1-204ENST00000594190 AACSQ86V21 672 aa19.64■□□□□ 0.73
USHBP1-204ENST00000594190 PCDH10Q9P2E7 1040 aa19.64■□□□□ 0.73
USHBP1-204ENST00000594190 CEP126Q9P2H0 1117 aa19.64■□□□□ 0.73
USHBP1-204ENST00000594190 GLRX3O76003 335 aaKnown RBP19.63■□□□□ 0.73
USHBP1-204ENST00000594190 FKBP1BP68106 108 aa19.63■□□□□ 0.73
USHBP1-204ENST00000594190 LDHAL6AQ6ZMR3 332 aa19.63■□□□□ 0.73
USHBP1-204ENST00000594190 CCDC102AQ96A19 550 aa19.63■□□□□ 0.73
USHBP1-204ENST00000594190 TSHZ2Q9NRE2 1034 aa19.63■□□□□ 0.73
USHBP1-204ENST00000594190 ECHDC1Q9NTX5 307 aa19.63■□□□□ 0.73
USHBP1-204ENST00000594190 MROH5Q6ZUA9 1318 aa19.62■□□□□ 0.73
USHBP1-204ENST00000594190 FKBP1AP62942 108 aaKnown RBP19.62■□□□□ 0.73
USHBP1-204ENST00000594190 TFCP2Q12800 502 aa19.62■□□□□ 0.73
USHBP1-204ENST00000594190 TNNI3KQ59H18 835 aa19.62■□□□□ 0.73
USHBP1-204ENST00000594190 MTMR14Q8NCE2 650 aa19.62■□□□□ 0.73
USHBP1-204ENST00000594190 OTUD7AQ8TE49 926 aaPredicted RBP19.62■□□□□ 0.73
USHBP1-204ENST00000594190 CNNM1Q9NRU3 951 aa19.62■□□□□ 0.73
USHBP1-204ENST00000594190 RIPOR2Q9Y4F9 1068 aa19.62■□□□□ 0.73
USHBP1-204ENST00000594190 FPGT-TNNI3KV9GXZ4 949 aa19.62■□□□□ 0.73
USHBP1-204ENST00000594190 CASC1Q6TDU7 716 aa19.61■□□□□ 0.73
USHBP1-204ENST00000594190 RASAL3Q86YV0 1011 aa19.61■□□□□ 0.73
USHBP1-204ENST00000594190 KIAA0825Q8IV33 1275 aa19.61■□□□□ 0.73
USHBP1-204ENST00000594190 OGFOD1Q8N543 542 aa19.61■□□□□ 0.73
USHBP1-204ENST00000594190 PUS3Q9BZE2 481 aaKnown RBP19.61■□□□□ 0.73
USHBP1-204ENST00000594190 KCNJ4P48050 445 aa19.6■□□□□ 0.73
USHBP1-204ENST00000594190 ZNF157P51786 506 aaPredicted RBP19.6■□□□□ 0.73
USHBP1-204ENST00000594190 KIF23Q02241 960 aaPredicted RBP19.6■□□□□ 0.73
USHBP1-204ENST00000594190 PRAMEF18Q5VWM3 479 aa19.6■□□□□ 0.73
USHBP1-204ENST00000594190 MOB2Q70IA6 237 aa19.6■□□□□ 0.73
USHBP1-204ENST00000594190 EAF2Q96CJ1 260 aaPredicted RBP19.6■□□□□ 0.73
USHBP1-204ENST00000594190 COL1A1P02452 1464 aaPredicted RBP19.6■□□□□ 0.73
USHBP1-204ENST00000594190 SSC5DA1L4H1 1573 aa19.59■□□□□ 0.73
USHBP1-204ENST00000594190 CDC45O75419 566 aa19.59■□□□□ 0.73
USHBP1-204ENST00000594190 GSPT1P15170 499 aaKnown RBP19.59■□□□□ 0.73
USHBP1-204ENST00000594190 LRRC24Q50LG9 513 aa19.59■□□□□ 0.73
USHBP1-204ENST00000594190 FBXW7Q969H0 707 aa19.59■□□□□ 0.73
USHBP1-204ENST00000594190 CSRNP1Q96S65 589 aa19.59■□□□□ 0.73
USHBP1-204ENST00000594190 BCL11AQ9H165 835 aa19.59■□□□□ 0.73
USHBP1-204ENST00000594190 SAGE1Q9NXZ1 904 aa19.59■□□□□ 0.73
USHBP1-204ENST00000594190 PCDHAC2Q9Y5I4 1007 aa19.59■□□□□ 0.73
USHBP1-204ENST00000594190 FAM205AQ6ZU69 1335 aa19.58■□□□□ 0.73
USHBP1-204ENST00000594190 UBE4AQ14139 1066 aa19.58■□□□□ 0.72
USHBP1-204ENST00000594190 METTL24Q5JXM2 366 aa19.58■□□□□ 0.72
USHBP1-204ENST00000594190 VGLL2Q8N8G2 317 aa19.58■□□□□ 0.72
USHBP1-204ENST00000594190 TDRD7Q8NHU6 1098 aaKnown RBP19.58■□□□□ 0.72
USHBP1-204ENST00000594190 UPF2Q9HAU5 1272 aaKnown RBP19.58■□□□□ 0.72
USHBP1-204ENST00000594190 ZNF804AQ7Z570 1209 aa19.57■□□□□ 0.72
USHBP1-204ENST00000594190 TICAM2Q86XR7 235 aa19.57■□□□□ 0.72
USHBP1-204ENST00000594190 PI4K2BQ8TCG2 481 aa19.57■□□□□ 0.72
USHBP1-204ENST00000594190 FAM84BQ96KN1 310 aaPredicted RBP19.57■□□□□ 0.72
USHBP1-204ENST00000594190 OTOFQ9HC10 1997 aa19.56■□□□□ 0.72
USHBP1-204ENST00000594190 SDSP20132 328 aa19.56■□□□□ 0.72
USHBP1-204ENST00000594190 CCDC8Q9H0W5 538 aaPredicted RBP19.56■□□□□ 0.72
USHBP1-204ENST00000594190 RNF186Q9NXI6 227 aa19.56■□□□□ 0.72
USHBP1-204ENST00000594190 HDAC9Q9UKV0 1011 aa19.56■□□□□ 0.72
USHBP1-204ENST00000594190 MYH13Q9UKX3 1938 aa19.56■□□□□ 0.72
USHBP1-204ENST00000594190 PDE8BO95263 885 aa19.55■□□□□ 0.72
USHBP1-204ENST00000594190 ATP5JP18859 108 aa19.55■□□□□ 0.72
USHBP1-204ENST00000594190 APOBEC3FQ8IUX4 373 aaKnown RBP19.55■□□□□ 0.72
USHBP1-204ENST00000594190 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.55■□□□□ 0.72
USHBP1-204ENST00000594190 AK9Q5TCS8 1911 aa19.55■□□□□ 0.72
USHBP1-204ENST00000594190 PDE4DIPQ5VU43 2346 aa19.54■□□□□ 0.72
USHBP1-204ENST00000594190 A0A1B0GUL7 405 aa19.54■□□□□ 0.72
USHBP1-204ENST00000594190 SPDYE2BA6NHP3 402 aa19.54■□□□□ 0.72
USHBP1-204ENST00000594190 UBE2Q2LH0YL09 131 aa19.54■□□□□ 0.72
USHBP1-204ENST00000594190 SPDYE6P0CI01 402 aa19.54■□□□□ 0.72
USHBP1-204ENST00000594190 PUM3Q15397 648 aaKnown RBP19.54■□□□□ 0.72
USHBP1-204ENST00000594190 ATP2B3Q16720 1220 aa19.54■□□□□ 0.72
USHBP1-204ENST00000594190 LDLRAD1Q5T700 205 aa19.54■□□□□ 0.72
USHBP1-204ENST00000594190 PRMT6Q96LA8 375 aaPredicted RBP19.54■□□□□ 0.72
USHBP1-204ENST00000594190 DBNLQ9UJU6 430 aaKnown RBP19.54■□□□□ 0.72
USHBP1-204ENST00000594190 TRIM6-TRIM34B2RNG4 842 aa19.53■□□□□ 0.72
USHBP1-204ENST00000594190 TRPA1O75762 1119 aa19.53■□□□□ 0.72
USHBP1-204ENST00000594190 GYG1P46976 350 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms