RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 FGFR2P21802 821 aa13.46□□□□□ -0.25
USE1-203ENST00000593597 CRKP46108 304 aa13.46□□□□□ -0.25
USE1-203ENST00000593597 RFX5P48382 616 aaPredicted RBP13.46□□□□□ -0.25
USE1-203ENST00000593597 RBM5P52756 815 aaKnown RBP eCLIP13.46□□□□□ -0.25
USE1-203ENST00000593597 FBXO46Q6PJ61 603 aaPredicted RBP13.46□□□□□ -0.25
USE1-203ENST00000593597 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.46□□□□□ -0.25
USE1-203ENST00000593597 DZIP1LQ8IYY4 767 aaKnown RBP13.46□□□□□ -0.25
USE1-203ENST00000593597 TMEM39BQ9GZU3 492 aa13.46□□□□□ -0.25
USE1-203ENST00000593597 USP44Q9H0E7 712 aa13.46□□□□□ -0.25
USE1-203ENST00000593597 TESPA1A2RU30 521 aaPredicted RBP13.45□□□□□ -0.26
USE1-203ENST00000593597 MYO1BO43795 1136 aa13.45□□□□□ -0.26
USE1-203ENST00000593597 PPP1R12BO60237 982 aaPredicted RBP13.45□□□□□ -0.26
USE1-203ENST00000593597 CACNB3P54284 484 aa13.45□□□□□ -0.26
USE1-203ENST00000593597 CHAF1AQ13111 956 aaPredicted RBP13.45□□□□□ -0.26
USE1-203ENST00000593597 CRHR2Q13324 411 aa13.45□□□□□ -0.26
USE1-203ENST00000593597 PKN2Q16513 984 aaKnown RBP13.45□□□□□ -0.26
USE1-203ENST00000593597 SUPT20HL1Q3ZLR7 823 aa13.45□□□□□ -0.26
USE1-203ENST00000593597 ELP3Q9H9T3 547 aa13.45□□□□□ -0.26
USE1-203ENST00000593597 UNCXA6NJT0 531 aa13.44□□□□□ -0.26
USE1-203ENST00000593597 TCP10L2B9ZVM9 353 aa13.44□□□□□ -0.26
USE1-203ENST00000593597 PDE8BO95263 885 aa13.44□□□□□ -0.26
USE1-203ENST00000593597 BCAMP50895 628 aa13.44□□□□□ -0.26
USE1-203ENST00000593597 SLFN5Q08AF3 891 aa13.44□□□□□ -0.26
USE1-203ENST00000593597 METTL24Q5JXM2 366 aa13.44□□□□□ -0.26
USE1-203ENST00000593597 OTOP1Q7RTM1 612 aa13.44□□□□□ -0.26
USE1-203ENST00000593597 ANKRD13AQ8IZ07 590 aa13.44□□□□□ -0.26
USE1-203ENST00000593597 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.44□□□□□ -0.26
USE1-203ENST00000593597 CDCA7LQ96GN5 454 aa13.44□□□□□ -0.26
USE1-203ENST00000593597 MS4A4AQ96JQ5 239 aa13.44□□□□□ -0.26
USE1-203ENST00000593597 DOCK2Q92608 1830 aa13.43□□□□□ -0.26
USE1-203ENST00000593597 PTPRCP08575 1304 aa13.43□□□□□ -0.26
USE1-203ENST00000593597 KIAA0100Q14667 2235 aaKnown RBP13.43□□□□□ -0.26
USE1-203ENST00000593597 ZEB1P37275 1124 aaPredicted RBP13.43□□□□□ -0.26
USE1-203ENST00000593597 IREB2P48200 963 aaKnown RBP13.43□□□□□ -0.26
USE1-203ENST00000593597 VGLL4Q14135 290 aa13.43□□□□□ -0.26
USE1-203ENST00000593597 BRI3BPQ8WY22 251 aa13.43□□□□□ -0.26
USE1-203ENST00000593597 OPTNQ96CV9 577 aa13.43□□□□□ -0.26
USE1-203ENST00000593597 MYH2Q9UKX2 1941 aa13.43□□□□□ -0.26
USE1-203ENST00000593597 ALDH1A1P00352 501 aa13.42□□□□□ -0.26
USE1-203ENST00000593597 INHBEP58166 350 aa13.42□□□□□ -0.26
USE1-203ENST00000593597 APOBEC3HQ6NTF7 200 aaKnown RBP13.42□□□□□ -0.26
USE1-203ENST00000593597 ATG9AQ7Z3C6 839 aa13.42□□□□□ -0.26
USE1-203ENST00000593597 CD99L2Q8TCZ2 262 aa13.42□□□□□ -0.26
USE1-203ENST00000593597 TRIM17Q9Y577 477 aa13.42□□□□□ -0.26
USE1-203ENST00000593597 SNCAIPQ9Y6H5 919 aa13.42□□□□□ -0.26
USE1-203ENST00000593597 KIF16BQ96L93 1317 aa13.41□□□□□ -0.26
USE1-203ENST00000593597 AK9Q5TCS8 1911 aa13.41□□□□□ -0.26
USE1-203ENST00000593597 E9PSI1 815 aa13.41□□□□□ -0.26
USE1-203ENST00000593597 TNFAIP1Q13829 316 aa13.41□□□□□ -0.26
USE1-203ENST00000593597 TRMT2AQ8IZ69 625 aaKnown RBP13.41□□□□□ -0.26
USE1-203ENST00000593597 ZDHHC15Q96MV8 337 aa13.41□□□□□ -0.26
USE1-203ENST00000593597 PHIPQ8WWQ0 1821 aa13.41□□□□□ -0.26
USE1-203ENST00000593597 PTPRFP10586 1907 aa13.41□□□□□ -0.26
USE1-203ENST00000593597 POTEFA5A3E0 1075 aa13.4□□□□□ -0.26
USE1-203ENST00000593597 HDLBPQ00341 1268 aaKnown RBP13.4□□□□□ -0.26
USE1-203ENST00000593597 FAM43AQ8N2R8 423 aa13.4□□□□□ -0.26
USE1-203ENST00000593597 RPAP1Q9BWH6 1393 aaPredicted RBP13.4□□□□□ -0.26
USE1-203ENST00000593597 EYA2O00167 538 aa13.39□□□□□ -0.27
USE1-203ENST00000593597 PUM3Q15397 648 aaKnown RBP13.39□□□□□ -0.27
USE1-203ENST00000593597 CAVIN4Q5BKX8 364 aa13.39□□□□□ -0.27
USE1-203ENST00000593597 TBC1D22AQ8WUA7 517 aa13.39□□□□□ -0.27
USE1-203ENST00000593597 TEKT1Q969V4 418 aa13.39□□□□□ -0.27
USE1-203ENST00000593597 OTUD5Q96G74 571 aa13.39□□□□□ -0.27
USE1-203ENST00000593597 PTPN22Q9Y2R2 807 aa13.39□□□□□ -0.27
USE1-203ENST00000593597 CCL15-CCL14A0A0B4J2E2 113 aa13.38□□□□□ -0.27
USE1-203ENST00000593597 SPDYE5A6NIY4 337 aa13.38□□□□□ -0.27
USE1-203ENST00000593597 MAP3K9P80192 1104 aa13.38□□□□□ -0.27
USE1-203ENST00000593597 CCL15Q16663 113 aa13.38□□□□□ -0.27
USE1-203ENST00000593597 ALDH1L2Q3SY69 923 aa13.38□□□□□ -0.27
USE1-203ENST00000593597 PRPF38BQ5VTL8 546 aaKnown RBP13.38□□□□□ -0.27
USE1-203ENST00000593597 VPS37DQ86XT2 251 aa13.38□□□□□ -0.27
USE1-203ENST00000593597 ZKSCAN4Q969J2 545 aaPredicted RBP13.38□□□□□ -0.27
USE1-203ENST00000593597 MGAMO43451 1857 aa13.38□□□□□ -0.27
USE1-203ENST00000593597 RFX7Q2KHR2 1363 aa13.37□□□□□ -0.27
USE1-203ENST00000593597 PRDX5P30044 214 aa13.37□□□□□ -0.27
USE1-203ENST00000593597 TNNI2P48788 182 aa13.37□□□□□ -0.27
USE1-203ENST00000593597 DIXDC1Q155Q3 683 aa13.37□□□□□ -0.27
USE1-203ENST00000593597 FAM83AQ86UY5 434 aa13.37□□□□□ -0.27
USE1-203ENST00000593597 ERO1AQ96HE7 468 aa13.37□□□□□ -0.27
USE1-203ENST00000593597 MRIQ9BWK5 157 aa13.37□□□□□ -0.27
USE1-203ENST00000593597 SMC4Q9NTJ3 1288 aa13.37□□□□□ -0.27
USE1-203ENST00000593597 DAGLAQ9Y4D2 1042 aa13.37□□□□□ -0.27
USE1-203ENST00000593597 DOCK1Q14185 1865 aa13.36□□□□□ -0.27
USE1-203ENST00000593597 ATRNL1Q5VV63 1379 aa13.36□□□□□ -0.27
USE1-203ENST00000593597 FRAT2O75474 233 aaPredicted RBP13.36□□□□□ -0.27
USE1-203ENST00000593597 IFIT1P09914 478 aaKnown RBP13.36□□□□□ -0.27
USE1-203ENST00000593597 INPP5BP32019 993 aa13.36□□□□□ -0.27
USE1-203ENST00000593597 SP3Q02447 781 aa13.36□□□□□ -0.27
USE1-203ENST00000593597 NFIAQ12857 509 aa13.36□□□□□ -0.27
USE1-203ENST00000593597 FKBP1CQ5VVH2 108 aa13.36□□□□□ -0.27
USE1-203ENST00000593597 HHIPL2Q6UWX4 724 aa13.36□□□□□ -0.27
USE1-203ENST00000593597 LPIN2Q92539 896 aa13.36□□□□□ -0.27
USE1-203ENST00000593597 ARMC5Q96C12 935 aa13.36□□□□□ -0.27
USE1-203ENST00000593597 WRNIP1Q96S55 665 aa13.36□□□□□ -0.27
USE1-203ENST00000593597 ARHGAP39Q9C0H5 1083 aa13.36□□□□□ -0.27
USE1-203ENST00000593597 SIL1Q9H173 461 aa13.36□□□□□ -0.27
USE1-203ENST00000593597 PA2G4Q9UQ80 394 aaKnown RBP13.36□□□□□ -0.27
USE1-203ENST00000593597 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.36□□□□□ -0.27
USE1-203ENST00000593597 BTBD19C9JJ37 291 aa13.35□□□□□ -0.27
USE1-203ENST00000593597 IRF6O14896 467 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms