RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 SSC5DA1L4H1 1573 aa17.26■□□□□ 0.35
APOC1-208ENST00000592535 SPDYE2Q495Y8 402 aa17.25■□□□□ 0.35
APOC1-208ENST00000592535 DZIP1LQ8IYY4 767 aaKnown RBP17.25■□□□□ 0.35
APOC1-208ENST00000592535 ZNF70Q9UC06 446 aaPredicted RBP17.25■□□□□ 0.35
APOC1-208ENST00000592535 FZD1Q9UP38 647 aa17.25■□□□□ 0.35
APOC1-208ENST00000592535 PPP2R3BQ9Y5P8 575 aa17.25■□□□□ 0.35
APOC1-208ENST00000592535 CASP8AP2Q9UKL3 1982 aa17.24■□□□□ 0.35
APOC1-208ENST00000592535 CA12O43570 354 aa17.24■□□□□ 0.35
APOC1-208ENST00000592535 ARMC9Q7Z3E5 817 aa17.24■□□□□ 0.35
APOC1-208ENST00000592535 PNMA6EA0A0J9YXQ4 647 aa17.23■□□□□ 0.35
APOC1-208ENST00000592535 RLBP1P12271 317 aa17.23■□□□□ 0.35
APOC1-208ENST00000592535 ADORA1P30542 326 aa17.23■□□□□ 0.35
APOC1-208ENST00000592535 PHKA1P46020 1223 aa17.23■□□□□ 0.35
APOC1-208ENST00000592535 HDLBPQ00341 1268 aaKnown RBP17.23■□□□□ 0.35
APOC1-208ENST00000592535 RASA3Q14644 834 aa17.23■□□□□ 0.35
APOC1-208ENST00000592535 FTSJ3Q8IY81 847 aaKnown RBP17.23■□□□□ 0.35
APOC1-208ENST00000592535 ANGEL1Q9UNK9 670 aaKnown RBP17.23■□□□□ 0.35
APOC1-208ENST00000592535 TFCP2Q12800 502 aa17.22■□□□□ 0.35
APOC1-208ENST00000592535 NBPF12Q5TAG4 269 aaPredicted RBP17.22■□□□□ 0.35
APOC1-208ENST00000592535 WDR66Q8TBY9 1149 aa17.22■□□□□ 0.35
APOC1-208ENST00000592535 TEKT1Q969V4 418 aa17.22■□□□□ 0.35
APOC1-208ENST00000592535 CSRNP1Q96S65 589 aa17.22■□□□□ 0.35
APOC1-208ENST00000592535 SUGT1Q9Y2Z0 365 aa17.22■□□□□ 0.35
APOC1-208ENST00000592535 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.22■□□□□ 0.35
APOC1-208ENST00000592535 OTOFQ9HC10 1997 aa17.21■□□□□ 0.35
APOC1-208ENST00000592535 TCP10L2B9ZVM9 353 aa17.21■□□□□ 0.35
APOC1-208ENST00000592535 TIMM10P62072 90 aa17.21■□□□□ 0.35
APOC1-208ENST00000592535 TNFAIP1Q13829 316 aa17.21■□□□□ 0.35
APOC1-208ENST00000592535 LDLRAD1Q5T700 205 aa17.21■□□□□ 0.35
APOC1-208ENST00000592535 GNL3LQ9NVN8 582 aaKnown RBP17.21■□□□□ 0.35
APOC1-208ENST00000592535 MAST3O60307 1309 aa17.21■□□□□ 0.34
APOC1-208ENST00000592535 A0A1B0GUL7 405 aa17.2■□□□□ 0.34
APOC1-208ENST00000592535 CAPN15O75808 1086 aa17.2■□□□□ 0.34
APOC1-208ENST00000592535 MAP3K11Q16584 847 aa17.2■□□□□ 0.34
APOC1-208ENST00000592535 SUPT20HL1Q3ZLR7 823 aa17.2■□□□□ 0.34
APOC1-208ENST00000592535 CCDC102BQ68D86 513 aa17.2■□□□□ 0.34
APOC1-208ENST00000592535 ITPRIPQ8IWB1 547 aa17.2■□□□□ 0.34
APOC1-208ENST00000592535 ZDHHC15Q96MV8 337 aa17.2■□□□□ 0.34
APOC1-208ENST00000592535 MRIQ9BWK5 157 aa17.2■□□□□ 0.34
APOC1-208ENST00000592535 C1orf115Q9H7X2 142 aa17.2■□□□□ 0.34
APOC1-208ENST00000592535 RNF186Q9NXI6 227 aa17.2■□□□□ 0.34
APOC1-208ENST00000592535 SEMA3EO15041 775 aa17.19■□□□□ 0.34
APOC1-208ENST00000592535 PPP1R12BO60237 982 aaPredicted RBP17.19■□□□□ 0.34
APOC1-208ENST00000592535 PRDX5P30044 214 aa17.19■□□□□ 0.34
APOC1-208ENST00000592535 CACNB3P54284 484 aa17.19■□□□□ 0.34
APOC1-208ENST00000592535 MKRN3Q13064 507 aaKnown RBP17.19■□□□□ 0.34
APOC1-208ENST00000592535 APOBEC3HQ6NTF7 200 aaKnown RBP17.19■□□□□ 0.34
APOC1-208ENST00000592535 HHIPL2Q6UWX4 724 aa17.19■□□□□ 0.34
APOC1-208ENST00000592535 CDAN1Q8IWY9 1227 aa17.19■□□□□ 0.34
APOC1-208ENST00000592535 TEPSINQ96N21 525 aa17.19■□□□□ 0.34
APOC1-208ENST00000592535 DENND2AQ9ULE3 1009 aa17.19■□□□□ 0.34
APOC1-208ENST00000592535 AKAP2Q9Y2D5 859 aa17.19■□□□□ 0.34
APOC1-208ENST00000592535 MYH2Q9UKX2 1941 aa17.18■□□□□ 0.34
APOC1-208ENST00000592535 ZBTB7BO15156 539 aaPredicted RBP17.18■□□□□ 0.34
APOC1-208ENST00000592535 USP2O75604 605 aaPredicted RBP17.18■□□□□ 0.34
APOC1-208ENST00000592535 TRPA1O75762 1119 aa17.18■□□□□ 0.34
APOC1-208ENST00000592535 TNNI2P48788 182 aa17.18■□□□□ 0.34
APOC1-208ENST00000592535 G3BP1Q13283 466 aaKnown RBP eCLIP17.18■□□□□ 0.34
APOC1-208ENST00000592535 POLA2Q14181 598 aa17.18■□□□□ 0.34
APOC1-208ENST00000592535 REM2Q8IYK8 340 aaPredicted RBP17.18■□□□□ 0.34
APOC1-208ENST00000592535 XAGE2Q96GT9 111 aa17.18■□□□□ 0.34
APOC1-208ENST00000592535 TMEM39BQ9GZU3 492 aa17.18■□□□□ 0.34
APOC1-208ENST00000592535 SAGE1Q9NXZ1 904 aa17.18■□□□□ 0.34
APOC1-208ENST00000592535 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.18■□□□□ 0.34
APOC1-208ENST00000592535 SALL1Q9NSC2 1324 aa17.18■□□□□ 0.34
APOC1-208ENST00000592535 LAMB1P07942 1786 aa17.17■□□□□ 0.34
APOC1-208ENST00000592535 ZBTB22O15209 634 aa17.17■□□□□ 0.34
APOC1-208ENST00000592535 ATP8B2P98198 1209 aa17.17■□□□□ 0.34
APOC1-208ENST00000592535 RASGRF1Q13972 1273 aa17.17■□□□□ 0.34
APOC1-208ENST00000592535 DIXDC1Q155Q3 683 aa17.17■□□□□ 0.34
APOC1-208ENST00000592535 PANK1Q8TE04 598 aa17.17■□□□□ 0.34
APOC1-208ENST00000592535 CLMNQ96JQ2 1002 aa17.17■□□□□ 0.34
APOC1-208ENST00000592535 LDHBP07195 334 aaKnown RBP17.16■□□□□ 0.34
APOC1-208ENST00000592535 IREB2P48200 963 aaKnown RBP17.16■□□□□ 0.34
APOC1-208ENST00000592535 MVPQ14764 893 aaKnown RBP17.16■□□□□ 0.34
APOC1-208ENST00000592535 SPRYD7Q5W111 196 aa17.16■□□□□ 0.34
APOC1-208ENST00000592535 SSH3Q8TE77 659 aa17.16■□□□□ 0.34
APOC1-208ENST00000592535 SLC10A4Q96EP9 437 aa17.16■□□□□ 0.34
APOC1-208ENST00000592535 NEUROD6Q96NK8 337 aa17.16■□□□□ 0.34
APOC1-208ENST00000592535 TMOD2Q9NZR1 351 aa17.16■□□□□ 0.34
APOC1-208ENST00000592535 DAGLAQ9Y4D2 1042 aa17.16■□□□□ 0.34
APOC1-208ENST00000592535 AK9Q5TCS8 1911 aa17.14■□□□□ 0.33
APOC1-208ENST00000592535 TM4SF4P48230 202 aa17.14■□□□□ 0.33
APOC1-208ENST00000592535 FKBP1CQ5VVH2 108 aa17.14■□□□□ 0.33
APOC1-208ENST00000592535 WNK4Q96J92 1243 aa17.14■□□□□ 0.33
APOC1-208ENST00000592535 PDS5AQ29RF7 1337 aaKnown RBP17.14■□□□□ 0.33
APOC1-208ENST00000592535 UNCXA6NJT0 531 aa17.13■□□□□ 0.33
APOC1-208ENST00000592535 SURF6O75683 361 aaKnown RBP17.13■□□□□ 0.33
APOC1-208ENST00000592535 OS9Q13438 667 aaPredicted RBP17.13■□□□□ 0.33
APOC1-208ENST00000592535 CDC42EP5Q6NZY7 148 aa17.13■□□□□ 0.33
APOC1-208ENST00000592535 FAM83AQ86UY5 434 aa17.13■□□□□ 0.33
APOC1-208ENST00000592535 ANKRD13AQ8IZ07 590 aa17.13■□□□□ 0.33
APOC1-208ENST00000592535 ZGPATQ8N5A5 531 aaKnown RBP17.13■□□□□ 0.33
APOC1-208ENST00000592535 ABCF2Q9UG63 623 aa17.13■□□□□ 0.33
APOC1-208ENST00000592535 SREBF2Q12772 1141 aa17.12■□□□□ 0.33
APOC1-208ENST00000592535 GORABQ5T7V8 394 aa17.12■□□□□ 0.33
APOC1-208ENST00000592535 HMG20BQ9P0W2 317 aa17.12■□□□□ 0.33
APOC1-208ENST00000592535 RPAP1Q9BWH6 1393 aaPredicted RBP17.12■□□□□ 0.33
APOC1-208ENST00000592535 TBC1D8O95759 1140 aa17.11■□□□□ 0.33
APOC1-208ENST00000592535 ZBTB48P10074 688 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms