RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 ZNF70Q9UC06 446 aaPredicted RBP25.07■■□□□ 1.6
CIRBP-239ENST00000592467 PPP2R3BQ9Y5P8 575 aa25.07■■□□□ 1.6
CIRBP-239ENST00000592467 MYO1BO43795 1136 aa25.06■■□□□ 1.6
CIRBP-239ENST00000592467 RBM5P52756 815 aaKnown RBP eCLIP25.06■■□□□ 1.6
CIRBP-239ENST00000592467 TFCP2Q12800 502 aa25.06■■□□□ 1.6
CIRBP-239ENST00000592467 POLA2Q14181 598 aa25.06■■□□□ 1.6
CIRBP-239ENST00000592467 MRIQ9BWK5 157 aa25.06■■□□□ 1.6
CIRBP-239ENST00000592467 SUGT1Q9Y2Z0 365 aa25.06■■□□□ 1.6
CIRBP-239ENST00000592467 TIMM10P62072 90 aa25.05■■□□□ 1.6
CIRBP-239ENST00000592467 KIF23Q02241 960 aaPredicted RBP25.05■■□□□ 1.6
CIRBP-239ENST00000592467 FZD1Q9UP38 647 aa25.05■■□□□ 1.6
CIRBP-239ENST00000592467 NF2P35240 595 aa25.04■■□□□ 1.6
CIRBP-239ENST00000592467 LDLRAD1Q5T700 205 aa25.04■■□□□ 1.6
CIRBP-239ENST00000592467 FTSJ3Q8IY81 847 aaKnown RBP25.04■■□□□ 1.6
CIRBP-239ENST00000592467 VEZTQ9HBM0 779 aa25.04■■□□□ 1.6
CIRBP-239ENST00000592467 ATP8B2P98198 1209 aa25.03■■□□□ 1.6
CIRBP-239ENST00000592467 RASA3Q14644 834 aa25.03■■□□□ 1.6
CIRBP-239ENST00000592467 MAP3K11Q16584 847 aa25.03■■□□□ 1.6
CIRBP-239ENST00000592467 CCDC102BQ68D86 513 aa25.03■■□□□ 1.6
CIRBP-239ENST00000592467 WDR66Q8TBY9 1149 aa25.03■■□□□ 1.6
CIRBP-239ENST00000592467 SSH3Q8TE77 659 aa25.03■■□□□ 1.6
CIRBP-239ENST00000592467 ZDHHC15Q96MV8 337 aa25.03■■□□□ 1.6
CIRBP-239ENST00000592467 C1orf115Q9H7X2 142 aa25.03■■□□□ 1.6
CIRBP-239ENST00000592467 A0A1B0GUL7 405 aa25.02■■□□□ 1.6
CIRBP-239ENST00000592467 NBPF12Q5TAG4 269 aaPredicted RBP25.02■■□□□ 1.6
CIRBP-239ENST00000592467 APOBEC3HQ6NTF7 200 aaKnown RBP25.02■■□□□ 1.6
CIRBP-239ENST00000592467 ITPRIPQ8IWB1 547 aa25.02■■□□□ 1.6
CIRBP-239ENST00000592467 TNS4Q8IZW8 715 aa25.02■■□□□ 1.6
CIRBP-239ENST00000592467 TEPSINQ96N21 525 aa25.02■■□□□ 1.6
CIRBP-239ENST00000592467 CSRNP1Q96S65 589 aa25.02■■□□□ 1.6
CIRBP-239ENST00000592467 TSKSQ9UJT2 592 aa25.02■■□□□ 1.6
CIRBP-239ENST00000592467 SALL1Q9NSC2 1324 aa25.02■■□□□ 1.6
CIRBP-239ENST00000592467 LAMB1P07942 1786 aa25.02■■□□□ 1.6
CIRBP-239ENST00000592467 AKAP11Q9UKA4 1901 aa25.02■■□□□ 1.6
CIRBP-239ENST00000592467 SEMA3EO15041 775 aa25.01■■□□□ 1.59
CIRBP-239ENST00000592467 PRKG1Q13976 671 aa25.01■■□□□ 1.59
CIRBP-239ENST00000592467 CDAN1Q8IWY9 1227 aa25.01■■□□□ 1.59
CIRBP-239ENST00000592467 PANK1Q8TE04 598 aa25.01■■□□□ 1.59
CIRBP-239ENST00000592467 TEKT1Q969V4 418 aa25.01■■□□□ 1.59
CIRBP-239ENST00000592467 XAGE2Q96GT9 111 aa25.01■■□□□ 1.59
CIRBP-239ENST00000592467 BEGAINQ9BUH8 593 aa25.01■■□□□ 1.59
CIRBP-239ENST00000592467 OTOFQ9HC10 1997 aa25.01■■□□□ 1.59
CIRBP-239ENST00000592467 CA12O43570 354 aa25■■□□□ 1.59
CIRBP-239ENST00000592467 PRDX5P30044 214 aa25■■□□□ 1.59
CIRBP-239ENST00000592467 TTLL12Q14166 644 aaPredicted RBP25■■□□□ 1.59
CIRBP-239ENST00000592467 HHIPL2Q6UWX4 724 aa25■■□□□ 1.59
CIRBP-239ENST00000592467 ARMC9Q7Z3E5 817 aa25■■□□□ 1.59
CIRBP-239ENST00000592467 ANGEL1Q9UNK9 670 aaKnown RBP25■■□□□ 1.59
CIRBP-239ENST00000592467 MAST3O60307 1309 aa25■■□□□ 1.59
CIRBP-239ENST00000592467 RASGRF1Q13972 1273 aa24.99■■□□□ 1.59
CIRBP-239ENST00000592467 GNL3LQ9NVN8 582 aaKnown RBP24.99■■□□□ 1.59
CIRBP-239ENST00000592467 DENND2AQ9ULE3 1009 aa24.99■■□□□ 1.59
CIRBP-239ENST00000592467 AKAP2Q9Y2D5 859 aa24.99■■□□□ 1.59
CIRBP-239ENST00000592467 PDS5AQ29RF7 1337 aaKnown RBP24.98■■□□□ 1.59
CIRBP-239ENST00000592467 TCP10L2B9ZVM9 353 aa24.97■■□□□ 1.59
CIRBP-239ENST00000592467 USP2O75604 605 aaPredicted RBP24.97■■□□□ 1.59
CIRBP-239ENST00000592467 CACNB3P54284 484 aa24.97■■□□□ 1.59
CIRBP-239ENST00000592467 TNFAIP1Q13829 316 aa24.97■■□□□ 1.59
CIRBP-239ENST00000592467 SUPT20HL1Q3ZLR7 823 aa24.97■■□□□ 1.59
CIRBP-239ENST00000592467 CASP8AP2Q9UKL3 1982 aa24.96■■□□□ 1.59
CIRBP-239ENST00000592467 MYH2Q9UKX2 1941 aa24.96■■□□□ 1.59
CIRBP-239ENST00000592467 G3BP1Q13283 466 aaKnown RBP eCLIP24.96■■□□□ 1.59
CIRBP-239ENST00000592467 DIXDC1Q155Q3 683 aa24.96■■□□□ 1.59
CIRBP-239ENST00000592467 TMEM39BQ9GZU3 492 aa24.96■■□□□ 1.59
CIRBP-239ENST00000592467 RNF186Q9NXI6 227 aa24.96■■□□□ 1.59
CIRBP-239ENST00000592467 NOP58Q9Y2X3 529 aaKnown RBP24.96■■□□□ 1.59
CIRBP-239ENST00000592467 DAGLAQ9Y4D2 1042 aa24.96■■□□□ 1.59
CIRBP-239ENST00000592467 CEP85Q6P2H3 762 aa24.95■■□□□ 1.58
CIRBP-239ENST00000592467 SAGE1Q9NXZ1 904 aa24.95■■□□□ 1.58
CIRBP-239ENST00000592467 MVPQ14764 893 aaKnown RBP24.94■■□□□ 1.58
CIRBP-239ENST00000592467 FKBP1CQ5VVH2 108 aa24.94■■□□□ 1.58
CIRBP-239ENST00000592467 REM2Q8IYK8 340 aaPredicted RBP24.94■■□□□ 1.58
CIRBP-239ENST00000592467 CLMNQ96JQ2 1002 aa24.94■■□□□ 1.58
CIRBP-239ENST00000592467 RCAN3Q9UKA8 241 aa24.94■■□□□ 1.58
CIRBP-239ENST00000592467 UNCXA6NJT0 531 aa24.93■■□□□ 1.58
CIRBP-239ENST00000592467 PPP1R12BO60237 982 aaPredicted RBP24.93■■□□□ 1.58
CIRBP-239ENST00000592467 LDHBP07195 334 aaKnown RBP24.93■■□□□ 1.58
CIRBP-239ENST00000592467 SPRYD7Q5W111 196 aa24.93■■□□□ 1.58
CIRBP-239ENST00000592467 NEUROD6Q96NK8 337 aa24.93■■□□□ 1.58
CIRBP-239ENST00000592467 GPR108Q9NPR9 543 aa24.93■■□□□ 1.58
CIRBP-239ENST00000592467 ARID4AP29374 1257 aaPredicted RBP24.92■■□□□ 1.58
CIRBP-239ENST00000592467 TM4SF4P48230 202 aa24.92■■□□□ 1.58
CIRBP-239ENST00000592467 FAM83AQ86UY5 434 aa24.92■■□□□ 1.58
CIRBP-239ENST00000592467 HMG20BQ9P0W2 317 aa24.92■■□□□ 1.58
CIRBP-239ENST00000592467 SURF6O75683 361 aaKnown RBP24.91■■□□□ 1.58
CIRBP-239ENST00000592467 TNNI2P48788 182 aa24.91■■□□□ 1.58
CIRBP-239ENST00000592467 TNNI3KQ59H18 835 aa24.91■■□□□ 1.58
CIRBP-239ENST00000592467 CDC42EP5Q6NZY7 148 aa24.91■■□□□ 1.58
CIRBP-239ENST00000592467 PI16Q6UXB8 463 aa24.91■■□□□ 1.58
CIRBP-239ENST00000592467 ZNF384Q8TF68 577 aa24.91■■□□□ 1.58
CIRBP-239ENST00000592467 FPGT-TNNI3KV9GXZ4 949 aa24.91■■□□□ 1.58
CIRBP-239ENST00000592467 GAKO14976 1311 aa24.9■■□□□ 1.58
CIRBP-239ENST00000592467 TRPA1O75762 1119 aa24.9■■□□□ 1.58
CIRBP-239ENST00000592467 MKRN3Q13064 507 aaKnown RBP24.9■■□□□ 1.58
CIRBP-239ENST00000592467 RPAP1Q9BWH6 1393 aaPredicted RBP24.9■■□□□ 1.58
CIRBP-239ENST00000592467 MS4A1P11836 297 aa24.89■■□□□ 1.58
CIRBP-239ENST00000592467 GJA5P36382 358 aa24.89■■□□□ 1.58
CIRBP-239ENST00000592467 ZGPATQ8N5A5 531 aaKnown RBP24.89■■□□□ 1.58
CIRBP-239ENST00000592467 WNK4Q96J92 1243 aa24.89■■□□□ 1.58
CIRBP-239ENST00000592467 MCAMP43121 646 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms