RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 MRPS27Q92552 414 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 ZKSCAN5Q9Y2L8 839 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 N4BP3O15049 544 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 PHKG2P15735 406 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 GNA11P29992 359 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 MSL1Q68DK7 614 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 CNKSR1Q969H4 720 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 ESYT1Q9BSJ8 1104 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 NLRP1Q9C000 1473 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 CARD10Q9BWT7 1032 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 PLVAPQ9BX97 442 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 ARFGAP3Q9NP61 516 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 TMCO5BA8MYB1 307 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 CHL1O00533 1208 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 MBD4O95243 580 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 LMAN1P49257 510 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 UBASH3AP57075 661 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 DLGAP5Q15398 846 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 KRT27Q7Z3Y8 459 aa15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 BCCIPQ9P287 314 aaKnown RBP eCLIP15.11■□□□□ 0.01
SMARCA4-216ENST00000591545 ADCY10Q96PN6 1610 aa15.1■□□□□ 0.01
SMARCA4-216ENST00000591545 LPIN2Q92539 896 aa15.1■□□□□ 0.01
SMARCA4-216ENST00000591545 TIGD1Q96MW7 591 aa15.1■□□□□ 0.01
SMARCA4-216ENST00000591545 DNAJC5Q9H3Z4 198 aa15.1■□□□□ 0.01
SMARCA4-216ENST00000591545 CTAGE15A4D2H0 777 aa15.1■□□□□ 0.01
SMARCA4-216ENST00000591545 ECM2O94769 699 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-216ENST00000591545 CTAGE8P0CG41 777 aa15.1■□□□□ 0.01
SMARCA4-216ENST00000591545 CTAGE6Q86UF2 777 aa15.1■□□□□ 0.01
SMARCA4-216ENST00000591545 CTAGE4Q8IX94 777 aa15.1■□□□□ 0.01
SMARCA4-216ENST00000591545 DCTPP1Q9H773 170 aa15.1■□□□□ 0.01
SMARCA4-216ENST00000591545 FSD2A1L4K1 749 aa15.1■□□□□ 0.01
SMARCA4-216ENST00000591545 MLH3Q9UHC1 1453 aa15.1■□□□□ 0.01
SMARCA4-216ENST00000591545 RAD50Q92878 1312 aa15.1■□□□□ 0.01
SMARCA4-216ENST00000591545 RPS8P62241 208 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-216ENST00000591545 MAP3K9P80192 1104 aa15.1■□□□□ 0.01
SMARCA4-216ENST00000591545 MAATS1Q7Z4T9 603 aa15.1■□□□□ 0.01
SMARCA4-216ENST00000591545 CCDC24Q8N4L8 307 aa15.1■□□□□ 0.01
SMARCA4-216ENST00000591545 SKILP12757 684 aa15.09■□□□□ 0.01
SMARCA4-216ENST00000591545 CTNNBL1Q8WYA6 563 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-216ENST00000591545 LRRC2Q9BYS8 371 aa15.09■□□□□ 0.01
SMARCA4-216ENST00000591545 MROH5Q6ZUA9 1318 aa15.09■□□□□ 0.01
SMARCA4-216ENST00000591545 TUBBP07437 444 aa15.09■□□□□ 0.01
SMARCA4-216ENST00000591545 EAPPQ56P03 285 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-216ENST00000591545 GIMAP6Q6P9H5 292 aa15.09■□□□□ 0.01
SMARCA4-216ENST00000591545 C2CD5Q86YS7 1000 aa15.09■□□□□ 0.01
SMARCA4-216ENST00000591545 JADE2Q9NQC1 790 aa15.09■□□□□ 0.01
SMARCA4-216ENST00000591545 KDM5DQ9BY66 1539 aa15.09■□□□□ 0.01
SMARCA4-216ENST00000591545 TNFAIP1Q13829 316 aa15.09■□□□□ 0.01
SMARCA4-216ENST00000591545 TRIM47Q96LD4 638 aa15.09■□□□□ 0.01
SMARCA4-216ENST00000591545 EXOC1Q9NV70 894 aa15.09■□□□□ 0.01
SMARCA4-216ENST00000591545 AKR1B10O60218 316 aa15.09■□□□□ 0.01
SMARCA4-216ENST00000591545 PARP1P09874 1014 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-216ENST00000591545 ARHGAP27Q6ZUM4 889 aa15.09■□□□□ 0.01
SMARCA4-216ENST00000591545 C6orf163Q5TEZ5 329 aa15.08■□□□□ 0.01
SMARCA4-216ENST00000591545 Q6ZUG5 572 aa15.08■□□□□ 0.01
SMARCA4-216ENST00000591545 TCHPQ9BT92 498 aa15.08■□□□□ 0.01
SMARCA4-216ENST00000591545 PANK2Q9BZ23 570 aa15.08■□□□□ 0.01
SMARCA4-216ENST00000591545 SAP30BPQ9UHR5 308 aaKnown RBP15.08■□□□□ 0.01
SMARCA4-216ENST00000591545 F13A1P00488 732 aa15.08■□□□□ 0
SMARCA4-216ENST00000591545 ANO6Q4KMQ2 910 aa15.08■□□□□ 0
SMARCA4-216ENST00000591545 SMC5Q8IY18 1101 aa15.08■□□□□ 0
SMARCA4-216ENST00000591545 HELLSQ9NRZ9 838 aa15.08■□□□□ 0
SMARCA4-216ENST00000591545 XRCC6P12956 609 aaKnown RBP eCLIP15.08■□□□□ 0
SMARCA4-216ENST00000591545 CTNNA2P26232 953 aa15.08■□□□□ 0
SMARCA4-216ENST00000591545 PRPHP41219 470 aa15.08■□□□□ 0
SMARCA4-216ENST00000591545 TIMM10P62072 90 aa15.08■□□□□ 0
SMARCA4-216ENST00000591545 CCDC155Q8N6L0 562 aa15.08■□□□□ 0
SMARCA4-216ENST00000591545 KIAA0232Q92628 1395 aa15.08■□□□□ 0
SMARCA4-216ENST00000591545 SBNO2Q9Y2G9 1366 aa15.08■□□□□ 0
SMARCA4-216ENST00000591545 NAP1L4Q99733 375 aaKnown RBP15.08■□□□□ 0
SMARCA4-216ENST00000591545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.08■□□□□ 02e-6■■■□□ 14.7
SMARCA4-216ENST00000591545 ZNF335Q9H4Z2 1342 aaPredicted RBP15.07■□□□□ 0
SMARCA4-216ENST00000591545 PPFIA3O75145 1194 aa15.07■□□□□ 0
SMARCA4-216ENST00000591545 TRIM37O94972 964 aa15.07■□□□□ 0
SMARCA4-216ENST00000591545 NOP2P46087 812 aaKnown RBP15.07■□□□□ 0
SMARCA4-216ENST00000591545 G2E3Q7L622 706 aa15.07■□□□□ 0
SMARCA4-216ENST00000591545 XAGE2Q96GT9 111 aa15.07■□□□□ 0
SMARCA4-216ENST00000591545 NSRP1Q9H0G5 558 aaKnown RBP15.07■□□□□ 0
SMARCA4-216ENST00000591545 LOC102724428A0A0B4J2F2 783 aa15.07■□□□□ 0
SMARCA4-216ENST00000591545 OPA1O60313 960 aa15.07■□□□□ 0
SMARCA4-216ENST00000591545 SLU7O95391 586 aaKnown RBP15.07■□□□□ 0
SMARCA4-216ENST00000591545 SIK1P57059 783 aa15.07■□□□□ 0
SMARCA4-216ENST00000591545 USP48Q86UV5 1035 aa15.07■□□□□ 0
SMARCA4-216ENST00000591545 DNA2P51530 1060 aa15.07■□□□□ 0
SMARCA4-216ENST00000591545 RBM28Q9NW13 759 aaKnown RBP15.07■□□□□ 0
SMARCA4-216ENST00000591545 ZMYM4Q5VZL5 1548 aa15.07■□□□□ 0
SMARCA4-216ENST00000591545 EIF4A1P60842 406 aaKnown RBP15.07■□□□□ 0
SMARCA4-216ENST00000591545 GCKRQ14397 625 aa15.07■□□□□ 0
SMARCA4-216ENST00000591545 TNNI3KQ59H18 835 aa15.07■□□□□ 0
SMARCA4-216ENST00000591545 PCDHB15Q9Y5E8 787 aa15.07■□□□□ 0
SMARCA4-216ENST00000591545 FPGT-TNNI3KV9GXZ4 949 aa15.07■□□□□ 0
SMARCA4-216ENST00000591545 ERBB4Q15303 1308 aa15.06■□□□□ 0
SMARCA4-216ENST00000591545 CCDC186Q7Z3E2 898 aa15.06■□□□□ 0
SMARCA4-216ENST00000591545 INTS4Q96HW7 963 aaKnown RBP15.06■□□□□ 0
SMARCA4-216ENST00000591545 BACH1O14867 736 aa15.06■□□□□ 0
SMARCA4-216ENST00000591545 KRT79Q5XKE5 535 aa15.06■□□□□ 0
SMARCA4-216ENST00000591545 NOD1Q9Y239 953 aa15.06■□□□□ 0
SMARCA4-216ENST00000591545 INSRP06213 1382 aa15.06■□□□□ 0
SMARCA4-216ENST00000591545 CFAP65Q6ZU64 1925 aaKnown RBP15.06■□□□□ 0
SMARCA4-216ENST00000591545 STAT6P42226 847 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms