RNA–Protein interactions for RNA: ENST00000590922.1

GFAP-217, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-217ENST00000590922 BRCA2P51587 3418 aa13.76□□□□□ -0.21
GFAP-217ENST00000590922 IRS2Q9Y4H2 1338 aa13.76□□□□□ -0.21
GFAP-217ENST00000590922 TESPA1A2RU30 521 aaPredicted RBP13.76□□□□□ -0.21
GFAP-217ENST00000590922 F8W031 263 aaPredicted RBP13.76□□□□□ -0.21
GFAP-217ENST00000590922 USP2O75604 605 aaPredicted RBP13.76□□□□□ -0.21
GFAP-217ENST00000590922 FKBP1AP62942 108 aaKnown RBP13.76□□□□□ -0.21
GFAP-217ENST00000590922 IFIT5Q13325 482 aaKnown RBP13.76□□□□□ -0.21
GFAP-217ENST00000590922 ZNF804AQ7Z570 1209 aa13.76□□□□□ -0.21
GFAP-217ENST00000590922 ZNF594Q96JF6 807 aaPredicted RBP13.76□□□□□ -0.21
GFAP-217ENST00000590922 PRMT6Q96LA8 375 aaPredicted RBP13.76□□□□□ -0.21
GFAP-217ENST00000590922 BICC1Q9H694 974 aaKnown RBP13.76□□□□□ -0.21
GFAP-217ENST00000590922 CEP290O15078 2479 aa13.76□□□□□ -0.21
GFAP-217ENST00000590922 SNAP23O00161 211 aa13.75□□□□□ -0.21
GFAP-217ENST00000590922 IPO8O15397 1037 aaKnown RBP13.75□□□□□ -0.21
GFAP-217ENST00000590922 TRIM27P14373 513 aa13.75□□□□□ -0.21
GFAP-217ENST00000590922 IL1R1P14778 569 aa13.75□□□□□ -0.21
GFAP-217ENST00000590922 RASA3Q14644 834 aa13.75□□□□□ -0.21
GFAP-217ENST00000590922 ARHGEF6Q15052 776 aa13.75□□□□□ -0.21
GFAP-217ENST00000590922 CCDC57Q2TAC2 916 aa13.75□□□□□ -0.21
GFAP-217ENST00000590922 NBPF11Q86T75 865 aa13.75□□□□□ -0.21
GFAP-217ENST00000590922 ANKRD44Q8N8A2 993 aa13.75□□□□□ -0.21
GFAP-217ENST00000590922 ZNF333Q96JL9 665 aa13.75□□□□□ -0.21
GFAP-217ENST00000590922 A0A1B0GUL6 1792 aa13.75□□□□□ -0.21
GFAP-217ENST00000590922 TAF5LO75529 589 aa13.74□□□□□ -0.21
GFAP-217ENST00000590922 RBM5P52756 815 aaKnown RBP eCLIP13.74□□□□□ -0.21
GFAP-217ENST00000590922 CAP1Q01518 475 aa13.74□□□□□ -0.21
GFAP-217ENST00000590922 TNFAIP1Q13829 316 aa13.74□□□□□ -0.21
GFAP-217ENST00000590922 RABL6Q3YEC7 729 aaPredicted RBP13.74□□□□□ -0.21
GFAP-217ENST00000590922 SLC9C1Q4G0N8 1177 aa13.74□□□□□ -0.21
GFAP-217ENST00000590922 ATF7IPQ6VMQ6 1270 aa13.74□□□□□ -0.21
GFAP-217ENST00000590922 HELBQ8NG08 1087 aaPredicted RBP13.74□□□□□ -0.21
GFAP-217ENST00000590922 CLUAP1Q96AJ1 413 aa13.74□□□□□ -0.21
GFAP-217ENST00000590922 OPTNQ96CV9 577 aa13.74□□□□□ -0.21
GFAP-217ENST00000590922 ELP3Q9H9T3 547 aa13.74□□□□□ -0.21
GFAP-217ENST00000590922 AOX1Q06278 1338 aa13.73□□□□□ -0.21
GFAP-217ENST00000590922 TAF7LQ5H9L4 462 aa13.73□□□□□ -0.21
GFAP-217ENST00000590922 MS4A4AQ96JQ5 239 aa13.73□□□□□ -0.21
GFAP-217ENST00000590922 COLQQ9Y215 455 aaPredicted RBP13.73□□□□□ -0.21
GFAP-217ENST00000590922 TRIOBPQ9H2D6 2365 aa13.72□□□□□ -0.21
GFAP-217ENST00000590922 UBTFL1P0CB47 393 aaPredicted RBP13.72□□□□□ -0.21
GFAP-217ENST00000590922 TAF1CQ15572 869 aaPredicted RBP13.72□□□□□ -0.21
GFAP-217ENST00000590922 SLC4A8Q2Y0W8 1093 aa13.72□□□□□ -0.21
GFAP-217ENST00000590922 ZKSCAN2Q63HK3 967 aa13.72□□□□□ -0.21
GFAP-217ENST00000590922 LDHAL6AQ6ZMR3 332 aa13.72□□□□□ -0.21
GFAP-217ENST00000590922 MEIS3Q99687 375 aa13.72□□□□□ -0.21
GFAP-217ENST00000590922 PUS3Q9BZE2 481 aaKnown RBP13.72□□□□□ -0.21
GFAP-217ENST00000590922 ZFYVE28Q9HCC9 887 aa13.72□□□□□ -0.21
GFAP-217ENST00000590922 JAG2Q9Y219 1238 aa13.72□□□□□ -0.21
GFAP-217ENST00000590922 PTCH2Q9Y6C5 1203 aa13.72□□□□□ -0.21
GFAP-217ENST00000590922 GTF2A2P52657 109 aa13.71□□□□□ -0.21
GFAP-217ENST00000590922 SPDYE2Q495Y8 402 aa13.71□□□□□ -0.21
GFAP-217ENST00000590922 BRI3BPQ8WY22 251 aa13.71□□□□□ -0.21
GFAP-217ENST00000590922 CNNM1Q9NRU3 951 aa13.71□□□□□ -0.21
GFAP-217ENST00000590922 ZNF70Q9UC06 446 aaPredicted RBP13.71□□□□□ -0.21
GFAP-217ENST00000590922 CCL15-CCL14A0A0B4J2E2 113 aa13.7□□□□□ -0.22
GFAP-217ENST00000590922 PLIN1O60240 522 aa13.7□□□□□ -0.22
GFAP-217ENST00000590922 CCL15Q16663 113 aa13.7□□□□□ -0.22
GFAP-217ENST00000590922 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.7□□□□□ -0.22
GFAP-217ENST00000590922 KLHDC4Q8TBB5 520 aa13.7□□□□□ -0.22
GFAP-217ENST00000590922 TEPSINQ96N21 525 aa13.7□□□□□ -0.22
GFAP-217ENST00000590922 SERPINA10Q9UK55 444 aa13.7□□□□□ -0.22
GFAP-217ENST00000590922 LRRFIP2Q9Y608 721 aaKnown RBP13.7□□□□□ -0.22
GFAP-217ENST00000590922 FAM205AQ6ZU69 1335 aa13.69□□□□□ -0.22
GFAP-217ENST00000590922 WDHD1O75717 1129 aaPredicted RBP13.69□□□□□ -0.22
GFAP-217ENST00000590922 VGLL4Q14135 290 aa13.69□□□□□ -0.22
GFAP-217ENST00000590922 LRRC24Q50LG9 513 aa13.69□□□□□ -0.22
GFAP-217ENST00000590922 MFSD14BQ5SR56 506 aa13.69□□□□□ -0.22
GFAP-217ENST00000590922 TMEM57Q8N5G2 664 aa13.69□□□□□ -0.22
GFAP-217ENST00000590922 CNKSR2Q8WXI2 1034 aa13.69□□□□□ -0.22
GFAP-217ENST00000590922 TDRD3Q9H7E2 651 aaKnown RBP13.69□□□□□ -0.22
GFAP-217ENST00000590922 CSADQ9Y600 493 aa13.69□□□□□ -0.22
GFAP-217ENST00000590922 ARAP2Q8WZ64 1704 aa13.69□□□□□ -0.22
GFAP-217ENST00000590922 H0YGN5 161 aa13.68□□□□□ -0.22
GFAP-217ENST00000590922 MYCP01106 439 aaPredicted RBP13.68□□□□□ -0.22
GFAP-217ENST00000590922 RLBP1P12271 317 aa13.68□□□□□ -0.22
GFAP-217ENST00000590922 RFX5P48382 616 aaPredicted RBP13.68□□□□□ -0.22
GFAP-217ENST00000590922 TNNI2P48788 182 aa13.68□□□□□ -0.22
GFAP-217ENST00000590922 MAP3K9P80192 1104 aa13.68□□□□□ -0.22
GFAP-217ENST00000590922 KIF22Q14807 665 aa13.68□□□□□ -0.22
GFAP-217ENST00000590922 CDAN1Q8IWY9 1227 aa13.68□□□□□ -0.22
GFAP-217ENST00000590922 DZIP1LQ8IYY4 767 aaKnown RBP13.68□□□□□ -0.22
GFAP-217ENST00000590922 FAM43AQ8N2R8 423 aa13.68□□□□□ -0.22
GFAP-217ENST00000590922 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.68□□□□□ -0.22
GFAP-217ENST00000590922 OTUD5Q96G74 571 aa13.68□□□□□ -0.22
GFAP-217ENST00000590922 YTHDC1Q96MU7 727 aaKnown RBP13.68□□□□□ -0.22
GFAP-217ENST00000590922 TMEM39BQ9GZU3 492 aa13.68□□□□□ -0.22
GFAP-217ENST00000590922 TTF2Q9UNY4 1162 aaKnown RBP13.68□□□□□ -0.22
GFAP-217ENST00000590922 RIPOR2Q9Y4F9 1068 aa13.68□□□□□ -0.22
GFAP-217ENST00000590922 TCP10L2B9ZVM9 353 aa13.67□□□□□ -0.22
GFAP-217ENST00000590922 TLR2O60603 784 aa13.67□□□□□ -0.22
GFAP-217ENST00000590922 GNAI3P08754 354 aa13.67□□□□□ -0.22
GFAP-217ENST00000590922 FTSJ3Q8IY81 847 aaKnown RBP13.67□□□□□ -0.22
GFAP-217ENST00000590922 TDRD7Q8NHU6 1098 aaKnown RBP13.67□□□□□ -0.22
GFAP-217ENST00000590922 ZSWIM8A7E2V4 1837 aa13.67□□□□□ -0.22
GFAP-217ENST00000590922 GNRH1P01148 92 aa13.66□□□□□ -0.22
GFAP-217ENST00000590922 CETPP11597 493 aa13.66□□□□□ -0.22
GFAP-217ENST00000590922 LACTBP83111 547 aaPredicted RBP13.66□□□□□ -0.22
GFAP-217ENST00000590922 SH3TC2Q8TF17 1288 aa13.66□□□□□ -0.22
GFAP-217ENST00000590922 ARHGAP39Q9C0H5 1083 aa13.66□□□□□ -0.22
GFAP-217ENST00000590922 ZCCHC17Q9NP64 241 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms