RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 HSPA1AP0DMV8 641 aaKnown RBP27.61■■■□□ 2.01
MBD3-208ENST00000590830 HSPA1BP0DMV9 641 aaKnown RBP27.61■■■□□ 2.01
MBD3-208ENST00000590830 RASGRF1Q13972 1273 aa27.61■■■□□ 2.01
MBD3-208ENST00000590830 SIRT2Q8IXJ6 389 aa27.61■■■□□ 2.01
MBD3-208ENST00000590830 TDRD3Q9H7E2 651 aaKnown RBP27.61■■■□□ 2.01
MBD3-208ENST00000590830 DENND2AQ9ULE3 1009 aa27.61■■■□□ 2.01
MBD3-208ENST00000590830 AOC2O75106 756 aa27.6■■■□□ 2.01
MBD3-208ENST00000590830 ECE1P42892 770 aa27.6■■■□□ 2.01
MBD3-208ENST00000590830 SPDYE2Q495Y8 402 aa27.6■■■□□ 2.01
MBD3-208ENST00000590830 ZNF70Q9UC06 446 aaPredicted RBP27.6■■■□□ 2.01
MBD3-208ENST00000590830 ARAP2Q8WZ64 1704 aa27.59■■■□□ 2.01
MBD3-208ENST00000590830 MYO1BO43795 1136 aa27.59■■■□□ 2.01
MBD3-208ENST00000590830 OS9Q13438 667 aaPredicted RBP27.59■■■□□ 2.01
MBD3-208ENST00000590830 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.59■■■□□ 2.01
MBD3-208ENST00000590830 VEZTQ9HBM0 779 aa27.59■■■□□ 2.01
MBD3-208ENST00000590830 GPR108Q9NPR9 543 aa27.59■■■□□ 2.01
MBD3-208ENST00000590830 PRDX5P30044 214 aa27.58■■■□□ 2.01
MBD3-208ENST00000590830 TNNI3KQ59H18 835 aa27.58■■■□□ 2.01
MBD3-208ENST00000590830 APOBEC3HQ6NTF7 200 aaKnown RBP27.58■■■□□ 2.01
MBD3-208ENST00000590830 TEKT1Q969V4 418 aa27.58■■■□□ 2.01
MBD3-208ENST00000590830 ZDHHC15Q96MV8 337 aa27.58■■■□□ 2.01
MBD3-208ENST00000590830 FPGT-TNNI3KV9GXZ4 949 aa27.58■■■□□ 2.01
MBD3-208ENST00000590830 SALL1Q9NSC2 1324 aa27.58■■■□□ 2.01
MBD3-208ENST00000590830 RGMBQ6NW40 437 aa27.57■■■□□ 2
MBD3-208ENST00000590830 UBE2Q2LH0YL09 131 aa27.56■■■□□ 2
MBD3-208ENST00000590830 FKBP1BP68106 108 aa27.56■■■□□ 2
MBD3-208ENST00000590830 RASA3Q14644 834 aa27.56■■■□□ 2
MBD3-208ENST00000590830 HHIPL2Q6UWX4 724 aa27.56■■■□□ 2
MBD3-208ENST00000590830 RPAP2Q8IXW5 612 aaPredicted RBP27.56■■■□□ 2
MBD3-208ENST00000590830 ZIC5Q96T25 663 aa27.56■■■□□ 2
MBD3-208ENST00000590830 WBP1LQ9NX94 342 aa27.56■■■□□ 2
MBD3-208ENST00000590830 EXOC6BQ9Y2D4 811 aa27.56■■■□□ 2
MBD3-208ENST00000590830 FAM155AB1AL88 458 aaPredicted RBP27.55■■■□□ 2
MBD3-208ENST00000590830 DIXDC1Q155Q3 683 aa27.55■■■□□ 2
MBD3-208ENST00000590830 DBNDD2Q9BQY9 259 aa27.55■■■□□ 2
MBD3-208ENST00000590830 HMG20BQ9P0W2 317 aa27.55■■■□□ 2
MBD3-208ENST00000590830 MAST3O60307 1309 aa27.54■■■□□ 2
MBD3-208ENST00000590830 LDHBP07195 334 aaKnown RBP27.54■■■□□ 2
MBD3-208ENST00000590830 PDS5AQ29RF7 1337 aaKnown RBP27.54■■■□□ 2
MBD3-208ENST00000590830 GORABQ5T7V8 394 aa27.54■■■□□ 2
MBD3-208ENST00000590830 PI16Q6UXB8 463 aa27.54■■■□□ 2
MBD3-208ENST00000590830 FZD1Q9UP38 647 aa27.54■■■□□ 2
MBD3-208ENST00000590830 PPP2R3BQ9Y5P8 575 aa27.54■■■□□ 2
MBD3-208ENST00000590830 ARID4AP29374 1257 aaPredicted RBP27.53■■■□□ 2
MBD3-208ENST00000590830 MAP2K2P36507 400 aa27.53■■■□□ 2
MBD3-208ENST00000590830 ZNF157P51786 506 aaPredicted RBP27.53■■■□□ 2
MBD3-208ENST00000590830 PRKG1Q13976 671 aa27.53■■■□□ 2
MBD3-208ENST00000590830 NBPF12Q5TAG4 269 aaPredicted RBP27.53■■■□□ 2
MBD3-208ENST00000590830 EAF2Q96CJ1 260 aaPredicted RBP27.53■■■□□ 2
MBD3-208ENST00000590830 TCP10L2B9ZVM9 353 aa27.52■■■□□ 2
MBD3-208ENST00000590830 CACNB3P54284 484 aa27.52■■■□□ 2
MBD3-208ENST00000590830 CDAN1Q8IWY9 1227 aa27.52■■■□□ 2
MBD3-208ENST00000590830 DAGLAQ9Y4D2 1042 aa27.52■■■□□ 2
MBD3-208ENST00000590830 FOXN1O15353 648 aa27.51■■□□□ 1.99
MBD3-208ENST00000590830 NF2P35240 595 aa27.51■■□□□ 1.99
MBD3-208ENST00000590830 MCAMP43121 646 aa27.51■■□□□ 1.99
MBD3-208ENST00000590830 SPATA5Q8NB90 893 aa27.51■■□□□ 1.99
MBD3-208ENST00000590830 TEPSINQ96N21 525 aa27.51■■□□□ 1.99
MBD3-208ENST00000590830 CHMP4BQ9H444 224 aaKnown RBP27.51■■□□□ 1.99
MBD3-208ENST00000590830 TLR7Q9NYK1 1049 aaKnown RBP27.51■■□□□ 1.99
MBD3-208ENST00000590830 SSC5DA1L4H1 1573 aa27.51■■□□□ 1.99
MBD3-208ENST00000590830 ECM29Q5VYK3 1845 aa27.51■■□□□ 1.99
MBD3-208ENST00000590830 PAPPA2Q9BXP8 1791 aa27.5■■□□□ 1.99
MBD3-208ENST00000590830 TTLL12Q14166 644 aaPredicted RBP27.5■■□□□ 1.99
MBD3-208ENST00000590830 TBC1D9Q6ZT07 1266 aa27.5■■□□□ 1.99
MBD3-208ENST00000590830 CCDC102AQ96A19 550 aa27.5■■□□□ 1.99
MBD3-208ENST00000590830 CCDC8Q9H0W5 538 aaPredicted RBP27.5■■□□□ 1.99
MBD3-208ENST00000590830 ABCF2Q9UG63 623 aa27.5■■□□□ 1.99
MBD3-208ENST00000590830 DBNLQ9UJU6 430 aaKnown RBP27.5■■□□□ 1.99
MBD3-208ENST00000590830 MYH13Q9UKX3 1938 aa27.49■■□□□ 1.99
MBD3-208ENST00000590830 THSD7BQ9C0I4 1608 aa27.49■■□□□ 1.99
MBD3-208ENST00000590830 SLC10A3P09131 477 aa27.49■■□□□ 1.99
MBD3-208ENST00000590830 MAP2K1Q02750 393 aaPredicted RBP27.49■■□□□ 1.99
MBD3-208ENST00000590830 ZGPATQ8N5A5 531 aaKnown RBP27.49■■□□□ 1.99
MBD3-208ENST00000590830 TMEM39BQ9GZU3 492 aa27.49■■□□□ 1.99
MBD3-208ENST00000590830 UQCRFS1P1P0C7P4 283 aa27.48■■□□□ 1.99
MBD3-208ENST00000590830 NOGQ13253 232 aa27.48■■□□□ 1.99
MBD3-208ENST00000590830 LDLRAD1Q5T700 205 aa27.48■■□□□ 1.99
MBD3-208ENST00000590830 RASAL3Q86YV0 1011 aa27.48■■□□□ 1.99
MBD3-208ENST00000590830 ZNF384Q8TF68 577 aa27.48■■□□□ 1.99
MBD3-208ENST00000590830 RRP1P56182 461 aaKnown RBP27.47■■□□□ 1.99
MBD3-208ENST00000590830 TNFAIP1Q13829 316 aa27.47■■□□□ 1.99
MBD3-208ENST00000590830 SUPT20HL1Q3ZLR7 823 aa27.47■■□□□ 1.99
MBD3-208ENST00000590830 CDC42EP5Q6NZY7 148 aa27.47■■□□□ 1.99
MBD3-208ENST00000590830 ERC1Q8IUD2 1116 aa27.47■■□□□ 1.99
MBD3-208ENST00000590830 RHPN1Q8TCX5 695 aa27.47■■□□□ 1.99
MBD3-208ENST00000590830 SNRKQ9NRH2 765 aa27.47■■□□□ 1.99
MBD3-208ENST00000590830 ANGEL1Q9UNK9 670 aaKnown RBP27.47■■□□□ 1.99
MBD3-208ENST00000590830 HMMRO75330 724 aa27.46■■□□□ 1.99
MBD3-208ENST00000590830 CCDC158Q5M9N0 1113 aa27.46■■□□□ 1.99
MBD3-208ENST00000590830 TTC39AQ5SRH9 613 aa27.46■■□□□ 1.99
MBD3-208ENST00000590830 ARMC9Q7Z3E5 817 aa27.46■■□□□ 1.99
MBD3-208ENST00000590830 USP2O75604 605 aaPredicted RBP27.45■■□□□ 1.98
MBD3-208ENST00000590830 KIF23Q02241 960 aaPredicted RBP27.45■■□□□ 1.98
MBD3-208ENST00000590830 MECOMQ03112 1051 aa27.45■■□□□ 1.98
MBD3-208ENST00000590830 MAP3K11Q16584 847 aa27.45■■□□□ 1.98
MBD3-208ENST00000590830 HSP90AB4PQ58FF6 505 aa27.45■■□□□ 1.98
MBD3-208ENST00000590830 FKBP1CQ5VVH2 108 aa27.45■■□□□ 1.98
MBD3-208ENST00000590830 SPTY2D1Q68D10 685 aaPredicted RBP27.45■■□□□ 1.98
MBD3-208ENST00000590830 ZNF512BQ96KM6 892 aaPredicted RBP27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms