RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 FPGT-TNNI3KV9GXZ4 949 aa17.29■□□□□ 0.36
SCAMP4-212ENST00000590266 AOX1Q06278 1338 aa17.28■□□□□ 0.36
SCAMP4-212ENST00000590266 APOBEC3FQ8IUX4 373 aaKnown RBP17.28■□□□□ 0.36
SCAMP4-212ENST00000590266 MTMR14Q8NCE2 650 aa17.28■□□□□ 0.36
SCAMP4-212ENST00000590266 TEKT1Q969V4 418 aa17.28■□□□□ 0.36
SCAMP4-212ENST00000590266 TLL2Q9Y6L7 1015 aa17.28■□□□□ 0.36
SCAMP4-212ENST00000590266 SEMA3EO15041 775 aa17.27■□□□□ 0.36
SCAMP4-212ENST00000590266 LDHBP07195 334 aaKnown RBP17.27■□□□□ 0.36
SCAMP4-212ENST00000590266 PRDX5P30044 214 aa17.27■□□□□ 0.36
SCAMP4-212ENST00000590266 ECE1P42892 770 aa17.27■□□□□ 0.36
SCAMP4-212ENST00000590266 TTC39AQ5SRH9 613 aa17.27■□□□□ 0.36
SCAMP4-212ENST00000590266 ERC1Q8IUD2 1116 aa17.27■□□□□ 0.36
SCAMP4-212ENST00000590266 SIRT2Q8IXJ6 389 aa17.27■□□□□ 0.36
SCAMP4-212ENST00000590266 C2orf69Q8N8R5 385 aa17.27■□□□□ 0.36
SCAMP4-212ENST00000590266 DBNDD2Q9BQY9 259 aa17.27■□□□□ 0.36
SCAMP4-212ENST00000590266 CCDC8Q9H0W5 538 aaPredicted RBP17.27■□□□□ 0.36
SCAMP4-212ENST00000590266 TDRD3Q9H7E2 651 aaKnown RBP17.27■□□□□ 0.36
SCAMP4-212ENST00000590266 GBA2Q9HCG7 927 aaPredicted RBP17.27■□□□□ 0.36
SCAMP4-212ENST00000590266 ABCF2Q9UG63 623 aa17.27■□□□□ 0.36
SCAMP4-212ENST00000590266 MAST3O60307 1309 aa17.26■□□□□ 0.35
SCAMP4-212ENST00000590266 CTCFP49711 727 aaPredicted RBP17.26■□□□□ 0.35
SCAMP4-212ENST00000590266 HUNKP57058 714 aa17.26■□□□□ 0.35
SCAMP4-212ENST00000590266 TTLL12Q14166 644 aaPredicted RBP17.26■□□□□ 0.35
SCAMP4-212ENST00000590266 HSP90AB4PQ58FF6 505 aa17.26■□□□□ 0.35
SCAMP4-212ENST00000590266 CYP4F22Q6NT55 531 aa17.26■□□□□ 0.35
SCAMP4-212ENST00000590266 PI16Q6UXB8 463 aa17.26■□□□□ 0.35
SCAMP4-212ENST00000590266 SAPCD2Q86UD0 394 aa17.26■□□□□ 0.35
SCAMP4-212ENST00000590266 IL1RAPL2Q9NP60 686 aa17.26■□□□□ 0.35
SCAMP4-212ENST00000590266 GPR108Q9NPR9 543 aa17.26■□□□□ 0.35
SCAMP4-212ENST00000590266 TLR7Q9NYK1 1049 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-212ENST00000590266 WDR33Q9C0J8 1336 aaKnown RBP17.25■□□□□ 0.35
SCAMP4-212ENST00000590266 FOXN1O15353 648 aa17.25■□□□□ 0.35
SCAMP4-212ENST00000590266 MAP2K1Q02750 393 aaPredicted RBP17.25■□□□□ 0.35
SCAMP4-212ENST00000590266 PRKG1Q13976 671 aa17.25■□□□□ 0.35
SCAMP4-212ENST00000590266 DIXDC1Q155Q3 683 aa17.25■□□□□ 0.35
SCAMP4-212ENST00000590266 CCDC158Q5M9N0 1113 aa17.25■□□□□ 0.35
SCAMP4-212ENST00000590266 BEGAINQ9BUH8 593 aa17.25■□□□□ 0.35
SCAMP4-212ENST00000590266 DEFB129Q9H1M3 183 aa17.25■□□□□ 0.35
SCAMP4-212ENST00000590266 HMG20BQ9P0W2 317 aa17.25■□□□□ 0.35
SCAMP4-212ENST00000590266 ZNF70Q9UC06 446 aaPredicted RBP17.25■□□□□ 0.35
SCAMP4-212ENST00000590266 SUGT1Q9Y2Z0 365 aa17.25■□□□□ 0.35
SCAMP4-212ENST00000590266 PCNTO95613 3336 aa17.24■□□□□ 0.35
SCAMP4-212ENST00000590266 TCP10L2B9ZVM9 353 aa17.24■□□□□ 0.35
SCAMP4-212ENST00000590266 NF2P35240 595 aa17.24■□□□□ 0.35
SCAMP4-212ENST00000590266 CACNB3P54284 484 aa17.24■□□□□ 0.35
SCAMP4-212ENST00000590266 AACSQ86V21 672 aa17.24■□□□□ 0.35
SCAMP4-212ENST00000590266 DZIP1Q86YF9 867 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-212ENST00000590266 ZGPATQ8N5A5 531 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-212ENST00000590266 SPATA5Q8NB90 893 aa17.24■□□□□ 0.35
SCAMP4-212ENST00000590266 RHPN1Q8TCX5 695 aa17.24■□□□□ 0.35
SCAMP4-212ENST00000590266 EAF2Q96CJ1 260 aaPredicted RBP17.24■□□□□ 0.35
SCAMP4-212ENST00000590266 CAPNS2Q96L46 248 aa17.24■□□□□ 0.35
SCAMP4-212ENST00000590266 CRBNQ96SW2 442 aa17.24■□□□□ 0.35
SCAMP4-212ENST00000590266 SNRKQ9NRH2 765 aa17.24■□□□□ 0.35
SCAMP4-212ENST00000590266 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.24■□□□□ 0.35
SCAMP4-212ENST00000590266 UQCRFS1P1P0C7P4 283 aa17.23■□□□□ 0.35
SCAMP4-212ENST00000590266 ARID4AP29374 1257 aaPredicted RBP17.23■□□□□ 0.35
SCAMP4-212ENST00000590266 MCAMP43121 646 aa17.23■□□□□ 0.35
SCAMP4-212ENST00000590266 HDLBPQ00341 1268 aaKnown RBP17.23■□□□□ 0.35
SCAMP4-212ENST00000590266 SPDYE2Q495Y8 402 aa17.23■□□□□ 0.35
SCAMP4-212ENST00000590266 MOB2Q70IA6 237 aa17.23■□□□□ 0.35
SCAMP4-212ENST00000590266 DBNLQ9UJU6 430 aaKnown RBP17.23■□□□□ 0.35
SCAMP4-212ENST00000590266 SALL1Q9NSC2 1324 aa17.22■□□□□ 0.35
SCAMP4-212ENST00000590266 RASA3Q14644 834 aa17.22■□□□□ 0.35
SCAMP4-212ENST00000590266 TBC1D9Q6ZT07 1266 aa17.22■□□□□ 0.35
SCAMP4-212ENST00000590266 KIF1BPQ96EK5 621 aa17.22■□□□□ 0.35
SCAMP4-212ENST00000590266 ZDHHC15Q96MV8 337 aa17.22■□□□□ 0.35
SCAMP4-212ENST00000590266 WBP1LQ9NX94 342 aa17.22■□□□□ 0.35
SCAMP4-212ENST00000590266 TMOD2Q9NZR1 351 aa17.22■□□□□ 0.35
SCAMP4-212ENST00000590266 ARAP2Q8WZ64 1704 aa17.21■□□□□ 0.35
SCAMP4-212ENST00000590266 TNFAIP1Q13829 316 aa17.21■□□□□ 0.35
SCAMP4-212ENST00000590266 SPTY2D1Q68D10 685 aaPredicted RBP17.21■□□□□ 0.35
SCAMP4-212ENST00000590266 APOBEC3HQ6NTF7 200 aaKnown RBP17.21■□□□□ 0.35
SCAMP4-212ENST00000590266 ERICH6Q7L0X2 663 aa17.21■□□□□ 0.35
SCAMP4-212ENST00000590266 PRDM10Q9NQV6 1147 aa17.21■□□□□ 0.35
SCAMP4-212ENST00000590266 RAI14Q9P0K7 980 aa17.21■□□□□ 0.35
SCAMP4-212ENST00000590266 FZD1Q9UP38 647 aa17.21■□□□□ 0.35
SCAMP4-212ENST00000590266 DAGLAQ9Y4D2 1042 aa17.21■□□□□ 0.35
SCAMP4-212ENST00000590266 PDS5AQ29RF7 1337 aaKnown RBP17.21■□□□□ 0.34
SCAMP4-212ENST00000590266 UBE2Q2LH0YL09 131 aa17.2■□□□□ 0.34
SCAMP4-212ENST00000590266 AOC2O75106 756 aa17.2■□□□□ 0.34
SCAMP4-212ENST00000590266 TNNI2P48788 182 aa17.2■□□□□ 0.34
SCAMP4-212ENST00000590266 ZNF157P51786 506 aaPredicted RBP17.2■□□□□ 0.34
SCAMP4-212ENST00000590266 HHIPL2Q6UWX4 724 aa17.2■□□□□ 0.34
SCAMP4-212ENST00000590266 CLASRPQ8N2M8 674 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-212ENST00000590266 LRP2BPQ9P2M1 347 aa17.2■□□□□ 0.34
SCAMP4-212ENST00000590266 RAB11FIP3O75154 756 aa17.19■□□□□ 0.34
SCAMP4-212ENST00000590266 IFIT2P09913 472 aaKnown RBP17.19■□□□□ 0.34
SCAMP4-212ENST00000590266 LBX1P52954 281 aa17.19■□□□□ 0.34
SCAMP4-212ENST00000590266 MECOMQ03112 1051 aa17.19■□□□□ 0.34
SCAMP4-212ENST00000590266 NBPF12Q5TAG4 269 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-212ENST00000590266 RGMBQ6NW40 437 aa17.19■□□□□ 0.34
SCAMP4-212ENST00000590266 MRIQ9BWK5 157 aa17.19■□□□□ 0.34
SCAMP4-212ENST00000590266 TMEM39BQ9GZU3 492 aa17.19■□□□□ 0.34
SCAMP4-212ENST00000590266 PPP2R3BQ9Y5P8 575 aa17.19■□□□□ 0.34
SCAMP4-212ENST00000590266 ZAP70P43403 619 aa17.18■□□□□ 0.34
SCAMP4-212ENST00000590266 FKBP1BP68106 108 aa17.18■□□□□ 0.34
SCAMP4-212ENST00000590266 HHIPL1Q96JK4 782 aa17.18■□□□□ 0.34
SCAMP4-212ENST00000590266 ANGEL1Q9UNK9 670 aaKnown RBP17.18■□□□□ 0.34
SCAMP4-212ENST00000590266 NDUFB9Q9Y6M9 179 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms