RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 DZIP1LQ8IYY4 767 aaKnown RBP25.59■■□□□ 1.69
CIRBP-226ENST00000590171 TDRD3Q9H7E2 651 aaKnown RBP25.59■■□□□ 1.69
CIRBP-226ENST00000590171 SPDYE2Q495Y8 402 aa25.58■■□□□ 1.69
CIRBP-226ENST00000590171 ZNF70Q9UC06 446 aaPredicted RBP25.58■■□□□ 1.69
CIRBP-226ENST00000590171 FZD1Q9UP38 647 aa25.58■■□□□ 1.69
CIRBP-226ENST00000590171 HDLBPQ00341 1268 aaKnown RBP25.57■■□□□ 1.68
CIRBP-226ENST00000590171 PNMA6EA0A0J9YXQ4 647 aa25.56■■□□□ 1.68
CIRBP-226ENST00000590171 RASA3Q14644 834 aa25.56■■□□□ 1.68
CIRBP-226ENST00000590171 ARMC9Q7Z3E5 817 aa25.56■■□□□ 1.68
CIRBP-226ENST00000590171 FTSJ3Q8IY81 847 aaKnown RBP25.56■■□□□ 1.68
CIRBP-226ENST00000590171 ANGEL1Q9UNK9 670 aaKnown RBP25.56■■□□□ 1.68
CIRBP-226ENST00000590171 SUGT1Q9Y2Z0 365 aa25.56■■□□□ 1.68
CIRBP-226ENST00000590171 RLBP1P12271 317 aa25.55■■□□□ 1.68
CIRBP-226ENST00000590171 ADORA1P30542 326 aa25.55■■□□□ 1.68
CIRBP-226ENST00000590171 PHKA1P46020 1223 aa25.55■■□□□ 1.68
CIRBP-226ENST00000590171 WDR66Q8TBY9 1149 aa25.55■■□□□ 1.68
CIRBP-226ENST00000590171 TEKT1Q969V4 418 aa25.55■■□□□ 1.68
CIRBP-226ENST00000590171 CSRNP1Q96S65 589 aa25.55■■□□□ 1.68
CIRBP-226ENST00000590171 TFCP2Q12800 502 aa25.54■■□□□ 1.68
CIRBP-226ENST00000590171 LDLRAD1Q5T700 205 aa25.54■■□□□ 1.68
CIRBP-226ENST00000590171 NBPF12Q5TAG4 269 aaPredicted RBP25.54■■□□□ 1.68
CIRBP-226ENST00000590171 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.54■■□□□ 1.68
CIRBP-226ENST00000590171 TIMM10P62072 90 aa25.53■■□□□ 1.68
CIRBP-226ENST00000590171 TNFAIP1Q13829 316 aa25.53■■□□□ 1.68
CIRBP-226ENST00000590171 MRIQ9BWK5 157 aa25.53■■□□□ 1.68
CIRBP-226ENST00000590171 GNL3LQ9NVN8 582 aaKnown RBP25.53■■□□□ 1.68
CIRBP-226ENST00000590171 MAST3O60307 1309 aa25.53■■□□□ 1.68
CIRBP-226ENST00000590171 MAP3K11Q16584 847 aa25.52■■□□□ 1.68
CIRBP-226ENST00000590171 SUPT20HL1Q3ZLR7 823 aa25.52■■□□□ 1.68
CIRBP-226ENST00000590171 CCDC102BQ68D86 513 aa25.52■■□□□ 1.68
CIRBP-226ENST00000590171 ITPRIPQ8IWB1 547 aa25.52■■□□□ 1.68
CIRBP-226ENST00000590171 ZDHHC15Q96MV8 337 aa25.52■■□□□ 1.68
CIRBP-226ENST00000590171 A0A1B0GUL7 405 aa25.51■■□□□ 1.67
CIRBP-226ENST00000590171 TCP10L2B9ZVM9 353 aa25.51■■□□□ 1.67
CIRBP-226ENST00000590171 SEMA3EO15041 775 aa25.51■■□□□ 1.67
CIRBP-226ENST00000590171 RNF186Q9NXI6 227 aa25.51■■□□□ 1.67
CIRBP-226ENST00000590171 SAGE1Q9NXZ1 904 aa25.51■■□□□ 1.67
CIRBP-226ENST00000590171 MYH13Q9UKX3 1938 aa25.51■■□□□ 1.67
CIRBP-226ENST00000590171 PPP1R12BO60237 982 aaPredicted RBP25.5■■□□□ 1.67
CIRBP-226ENST00000590171 PRDX5P30044 214 aa25.5■■□□□ 1.67
CIRBP-226ENST00000590171 APOBEC3HQ6NTF7 200 aaKnown RBP25.5■■□□□ 1.67
CIRBP-226ENST00000590171 CDAN1Q8IWY9 1227 aa25.5■■□□□ 1.67
CIRBP-226ENST00000590171 C1orf115Q9H7X2 142 aa25.5■■□□□ 1.67
CIRBP-226ENST00000590171 DENND2AQ9ULE3 1009 aa25.5■■□□□ 1.67
CIRBP-226ENST00000590171 AKAP2Q9Y2D5 859 aa25.5■■□□□ 1.67
CIRBP-226ENST00000590171 SALL1Q9NSC2 1324 aa25.49■■□□□ 1.67
CIRBP-226ENST00000590171 ZBTB7BO15156 539 aaPredicted RBP25.49■■□□□ 1.67
CIRBP-226ENST00000590171 ZBTB22O15209 634 aa25.49■■□□□ 1.67
CIRBP-226ENST00000590171 CAPN15O75808 1086 aa25.49■■□□□ 1.67
CIRBP-226ENST00000590171 CACNB3P54284 484 aa25.49■■□□□ 1.67
CIRBP-226ENST00000590171 HHIPL2Q6UWX4 724 aa25.49■■□□□ 1.67
CIRBP-226ENST00000590171 REM2Q8IYK8 340 aaPredicted RBP25.49■■□□□ 1.67
CIRBP-226ENST00000590171 XAGE2Q96GT9 111 aa25.49■■□□□ 1.67
CIRBP-226ENST00000590171 TEPSINQ96N21 525 aa25.49■■□□□ 1.67
CIRBP-226ENST00000590171 TRPA1O75762 1119 aa25.48■■□□□ 1.67
CIRBP-226ENST00000590171 TNNI2P48788 182 aa25.48■■□□□ 1.67
CIRBP-226ENST00000590171 MKRN3Q13064 507 aaKnown RBP25.48■■□□□ 1.67
CIRBP-226ENST00000590171 POLA2Q14181 598 aa25.48■■□□□ 1.67
CIRBP-226ENST00000590171 TMEM39BQ9GZU3 492 aa25.48■■□□□ 1.67
CIRBP-226ENST00000590171 USP2O75604 605 aaPredicted RBP25.47■■□□□ 1.67
CIRBP-226ENST00000590171 ATP8B2P98198 1209 aa25.47■■□□□ 1.67
CIRBP-226ENST00000590171 G3BP1Q13283 466 aaKnown RBP eCLIP25.47■■□□□ 1.67
CIRBP-226ENST00000590171 RASGRF1Q13972 1273 aa25.47■■□□□ 1.67
CIRBP-226ENST00000590171 DIXDC1Q155Q3 683 aa25.47■■□□□ 1.67
CIRBP-226ENST00000590171 CLMNQ96JQ2 1002 aa25.47■■□□□ 1.67
CIRBP-226ENST00000590171 LDHBP07195 334 aaKnown RBP25.46■■□□□ 1.67
CIRBP-226ENST00000590171 MVPQ14764 893 aaKnown RBP25.46■■□□□ 1.67
CIRBP-226ENST00000590171 SPRYD7Q5W111 196 aa25.46■■□□□ 1.67
CIRBP-226ENST00000590171 PANK1Q8TE04 598 aa25.46■■□□□ 1.67
CIRBP-226ENST00000590171 SSH3Q8TE77 659 aa25.46■■□□□ 1.67
CIRBP-226ENST00000590171 NEUROD6Q96NK8 337 aa25.45■■□□□ 1.66
CIRBP-226ENST00000590171 TMOD2Q9NZR1 351 aa25.45■■□□□ 1.66
CIRBP-226ENST00000590171 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.45■■□□□ 1.66
CIRBP-226ENST00000590171 DAGLAQ9Y4D2 1042 aa25.45■■□□□ 1.66
CIRBP-226ENST00000590171 PDS5AQ29RF7 1337 aaKnown RBP25.44■■□□□ 1.66
CIRBP-226ENST00000590171 IREB2P48200 963 aaKnown RBP25.44■■□□□ 1.66
CIRBP-226ENST00000590171 SLC10A4Q96EP9 437 aa25.44■■□□□ 1.66
CIRBP-226ENST00000590171 UNCXA6NJT0 531 aa25.43■■□□□ 1.66
CIRBP-226ENST00000590171 TM4SF4P48230 202 aa25.43■■□□□ 1.66
CIRBP-226ENST00000590171 FKBP1CQ5VVH2 108 aa25.43■■□□□ 1.66
CIRBP-226ENST00000590171 FAM83AQ86UY5 434 aa25.42■■□□□ 1.66
CIRBP-226ENST00000590171 ANKRD13AQ8IZ07 590 aa25.42■■□□□ 1.66
CIRBP-226ENST00000590171 ZGPATQ8N5A5 531 aaKnown RBP25.42■■□□□ 1.66
CIRBP-226ENST00000590171 SREBF2Q12772 1141 aa25.41■■□□□ 1.66
CIRBP-226ENST00000590171 WNK4Q96J92 1243 aa25.41■■□□□ 1.66
CIRBP-226ENST00000590171 AKAP11Q9UKA4 1901 aa25.4■■□□□ 1.66
CIRBP-226ENST00000590171 SURF6O75683 361 aaKnown RBP25.4■■□□□ 1.66
CIRBP-226ENST00000590171 ZBTB48P10074 688 aaPredicted RBP25.4■■□□□ 1.66
CIRBP-226ENST00000590171 GORABQ5T7V8 394 aa25.4■■□□□ 1.66
CIRBP-226ENST00000590171 CDC42EP5Q6NZY7 148 aa25.4■■□□□ 1.66
CIRBP-226ENST00000590171 ABCF2Q9UG63 623 aa25.4■■□□□ 1.66
CIRBP-226ENST00000590171 OTOFQ9HC10 1997 aa25.39■■□□□ 1.66
CIRBP-226ENST00000590171 OS9Q13438 667 aaPredicted RBP25.39■■□□□ 1.66
CIRBP-226ENST00000590171 CEP85Q6P2H3 762 aa25.39■■□□□ 1.66
CIRBP-226ENST00000590171 GPR108Q9NPR9 543 aa25.39■■□□□ 1.66
CIRBP-226ENST00000590171 HMG20BQ9P0W2 317 aa25.39■■□□□ 1.66
CIRBP-226ENST00000590171 RPAP1Q9BWH6 1393 aaPredicted RBP25.39■■□□□ 1.65
CIRBP-226ENST00000590171 ARID4AP29374 1257 aaPredicted RBP25.38■■□□□ 1.65
CIRBP-226ENST00000590171 GJA5P36382 358 aa25.38■■□□□ 1.65
CIRBP-226ENST00000590171 TNNI3KQ59H18 835 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms