RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 MAP3K9P80192 1104 aa16.35■□□□□ 0.21
PRKCSH-210ENST00000589990 LACTBP83111 547 aaPredicted RBP16.35■□□□□ 0.21
PRKCSH-210ENST00000589990 FOXO4P98177 505 aa16.35■□□□□ 0.21
PRKCSH-210ENST00000589990 TTF2Q9UNY4 1162 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-210ENST00000589990 BTBD19C9JJ37 291 aa16.34■□□□□ 0.21
PRKCSH-210ENST00000589990 SLC4A2P04920 1241 aa16.34■□□□□ 0.21
PRKCSH-210ENST00000589990 CACNB3P54284 484 aa16.34■□□□□ 0.21
PRKCSH-210ENST00000589990 DDX10Q13206 875 aaKnown RBP16.34■□□□□ 0.21
PRKCSH-210ENST00000589990 EPHA10Q5JZY3 1008 aa16.34■□□□□ 0.21
PRKCSH-210ENST00000589990 MFSD14BQ5SR56 506 aa16.34■□□□□ 0.21
PRKCSH-210ENST00000589990 DZIP1LQ8IYY4 767 aaKnown RBP16.34■□□□□ 0.21
PRKCSH-210ENST00000589990 DPF3Q92784 378 aa16.34■□□□□ 0.21
PRKCSH-210ENST00000589990 SNCAIPQ9Y6H5 919 aa16.34■□□□□ 0.21
PRKCSH-210ENST00000589990 DLL1O00548 723 aa16.33■□□□□ 0.2
PRKCSH-210ENST00000589990 TLR2O60603 784 aa16.33■□□□□ 0.2
PRKCSH-210ENST00000589990 STK31Q9BXU1 1019 aa16.33■□□□□ 0.2
PRKCSH-210ENST00000589990 PRO3102Q9H379 93 aa16.33■□□□□ 0.2
PRKCSH-210ENST00000589990 CHMP3Q9Y3E7 222 aa16.33■□□□□ 0.2
PRKCSH-210ENST00000589990 FAM205AQ6ZU69 1335 aa16.33■□□□□ 0.2
PRKCSH-210ENST00000589990 SPDYE5A6NIY4 337 aa16.32■□□□□ 0.2
PRKCSH-210ENST00000589990 GYG1P46976 350 aa16.32■□□□□ 0.2
PRKCSH-210ENST00000589990 CALD1Q05682 793 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-210ENST00000589990 FLIIQ13045 1269 aa16.32■□□□□ 0.2
PRKCSH-210ENST00000589990 TNFAIP1Q13829 316 aa16.32■□□□□ 0.2
PRKCSH-210ENST00000589990 ARHGEF6Q15052 776 aa16.32■□□□□ 0.2
PRKCSH-210ENST00000589990 ZKSCAN4Q969J2 545 aaPredicted RBP16.32■□□□□ 0.2
PRKCSH-210ENST00000589990 SERPINA10Q9UK55 444 aa16.32■□□□□ 0.2
PRKCSH-210ENST00000589990 IRF6O14896 467 aa16.31■□□□□ 0.2
PRKCSH-210ENST00000589990 CRKP46108 304 aa16.31■□□□□ 0.2
PRKCSH-210ENST00000589990 IFIT5Q13325 482 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-210ENST00000589990 UBE2Q1Q7Z7E8 422 aa16.31■□□□□ 0.2
PRKCSH-210ENST00000589990 TDRD7Q8NHU6 1098 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-210ENST00000589990 DNAAF4Q8WXU2 420 aa16.31■□□□□ 0.2
PRKCSH-210ENST00000589990 TRIM47Q96LD4 638 aa16.31■□□□□ 0.2
PRKCSH-210ENST00000589990 CPA4Q9UI42 421 aa16.31■□□□□ 0.2
PRKCSH-210ENST00000589990 CSADQ9Y600 493 aa16.31■□□□□ 0.2
PRKCSH-210ENST00000589990 SOX1O00570 391 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-210ENST00000589990 TWISTNBQ3B726 338 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-210ENST00000589990 LMBR1LQ6UX01 489 aa16.3■□□□□ 0.2
PRKCSH-210ENST00000589990 LINS1Q8NG48 757 aa16.3■□□□□ 0.2
PRKCSH-210ENST00000589990 MYH16Q9H6N6 1097 aa16.3■□□□□ 0.2
PRKCSH-210ENST00000589990 IQSEC3Q9UPP2 1182 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-210ENST00000589990 CETPP11597 493 aa16.29■□□□□ 0.2
PRKCSH-210ENST00000589990 FKBP5Q13451 457 aaPredicted RBP16.29■□□□□ 0.2
PRKCSH-210ENST00000589990 KIF22Q14807 665 aa16.29■□□□□ 0.2
PRKCSH-210ENST00000589990 C17orf99Q6UX52 265 aa16.29■□□□□ 0.2
PRKCSH-210ENST00000589990 SLC17A8Q8NDX2 589 aa16.29■□□□□ 0.2
PRKCSH-210ENST00000589990 FAM84BQ96KN1 310 aaPredicted RBP16.29■□□□□ 0.2
PRKCSH-210ENST00000589990 WRNIP1Q96S55 665 aa16.29■□□□□ 0.2
PRKCSH-210ENST00000589990 F6X3S4 739 aa16.28■□□□□ 0.2
PRKCSH-210ENST00000589990 OSBPP22059 807 aa16.28■□□□□ 0.2
PRKCSH-210ENST00000589990 PSMC4P43686 418 aa16.28■□□□□ 0.2
PRKCSH-210ENST00000589990 LDHAL6AQ6ZMR3 332 aa16.28■□□□□ 0.2
PRKCSH-210ENST00000589990 ERO1BQ86YB8 467 aa16.28■□□□□ 0.2
PRKCSH-210ENST00000589990 PUS3Q9BZE2 481 aaKnown RBP16.28■□□□□ 0.2
PRKCSH-210ENST00000589990 SRRDQ9UH36 339 aa16.28■□□□□ 0.2
PRKCSH-210ENST00000589990 ADGRA2Q96PE1 1338 aa16.27■□□□□ 0.2
PRKCSH-210ENST00000589990 CCL5P13501 91 aa16.27■□□□□ 0.2
PRKCSH-210ENST00000589990 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.27■□□□□ 0.2
PRKCSH-210ENST00000589990 LRCH3Q96II8 777 aa16.27■□□□□ 0.2
PRKCSH-210ENST00000589990 CNNM1Q9NRU3 951 aa16.27■□□□□ 0.2
PRKCSH-210ENST00000589990 RIPOR2Q9Y4F9 1068 aa16.27■□□□□ 0.2
PRKCSH-210ENST00000589990 HIBADHP31937 336 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-210ENST00000589990 INPP5BP32019 993 aa16.26■□□□□ 0.19
PRKCSH-210ENST00000589990 GRK4P32298 578 aa16.26■□□□□ 0.19
PRKCSH-210ENST00000589990 GJA8P48165 433 aa16.26■□□□□ 0.19
PRKCSH-210ENST00000589990 TNNI2P48788 182 aa16.26■□□□□ 0.19
PRKCSH-210ENST00000589990 PPIL2Q13356 520 aa16.26■□□□□ 0.19
PRKCSH-210ENST00000589990 SNAPC2Q13487 334 aa16.26■□□□□ 0.19
PRKCSH-210ENST00000589990 MIGA2Q7L4E1 593 aa16.26■□□□□ 0.19
PRKCSH-210ENST00000589990 CHMP4AQ9BY43 222 aa16.26■□□□□ 0.19
PRKCSH-210ENST00000589990 MYPNQ86TC9 1320 aa16.25■□□□□ 0.19
PRKCSH-210ENST00000589990 ZBTB7BO15156 539 aaPredicted RBP16.25■□□□□ 0.19
PRKCSH-210ENST00000589990 CHAF1AQ13111 956 aaPredicted RBP16.25■□□□□ 0.19
PRKCSH-210ENST00000589990 MOGSQ13724 837 aa16.25■□□□□ 0.19
PRKCSH-210ENST00000589990 BEND3Q5T5X7 828 aa16.25■□□□□ 0.19
PRKCSH-210ENST00000589990 RNF208Q9H0X6 261 aa16.25■□□□□ 0.19
PRKCSH-210ENST00000589990 ZCCHC17Q9NP64 241 aaKnown RBP16.25■□□□□ 0.19
PRKCSH-210ENST00000589990 PDHXO00330 501 aa16.24■□□□□ 0.19
PRKCSH-210ENST00000589990 FMNL1O95466 1100 aaPredicted RBP16.24■□□□□ 0.19
PRKCSH-210ENST00000589990 GNRH1P01148 92 aa16.24■□□□□ 0.19
PRKCSH-210ENST00000589990 GJB1P08034 283 aa16.24■□□□□ 0.19
PRKCSH-210ENST00000589990 PRMT2P55345 433 aa16.24■□□□□ 0.19
PRKCSH-210ENST00000589990 PRKCZQ05513 592 aa16.24■□□□□ 0.19
PRKCSH-210ENST00000589990 TAF7LQ5H9L4 462 aa16.24■□□□□ 0.19
PRKCSH-210ENST00000589990 RAET1EQ8TD07 263 aa16.24■□□□□ 0.19
PRKCSH-210ENST00000589990 UNC93B1Q9H1C4 597 aa16.24■□□□□ 0.19
PRKCSH-210ENST00000589990 GABRQQ9UN88 632 aa16.24■□□□□ 0.19
PRKCSH-210ENST00000589990 ALPK3Q96L96 1907 aa16.23■□□□□ 0.19
PRKCSH-210ENST00000589990 MGAMO43451 1857 aa16.23■□□□□ 0.19
PRKCSH-210ENST00000589990 WDHD1O75717 1129 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-210ENST00000589990 UBE4AQ14139 1066 aa16.23■□□□□ 0.19
PRKCSH-210ENST00000589990 CCDC57Q2TAC2 916 aa16.23■□□□□ 0.19
PRKCSH-210ENST00000589990 APOBEC3HQ6NTF7 200 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-210ENST00000589990 U2AF1L4Q8WU68 220 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-210ENST00000589990 PRKRIP1Q9H875 184 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-210ENST00000589990 FARP2O94887 1054 aaPredicted RBP16.22■□□□□ 0.19
PRKCSH-210ENST00000589990 FBXO33Q7Z6M2 555 aa16.22■□□□□ 0.19
PRKCSH-210ENST00000589990 WWC1Q8IX03 1113 aa16.22■□□□□ 0.19
PRKCSH-210ENST00000589990 HTATIP2Q9BUP3 242 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms