RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 GTF2A2P52657 109 aa19.28■□□□□ 0.68
ACTN4-211ENST00000589528 CCL15Q16663 113 aa19.28■□□□□ 0.68
ACTN4-211ENST00000589528 SLC4A8Q2Y0W8 1093 aa19.28■□□□□ 0.68
ACTN4-211ENST00000589528 VPS37DQ86XT2 251 aa19.28■□□□□ 0.68
ACTN4-211ENST00000589528 DZIP1LQ8IYY4 767 aaKnown RBP19.28■□□□□ 0.68
ACTN4-211ENST00000589528 VAMP4O75379 141 aa19.27■□□□□ 0.68
ACTN4-211ENST00000589528 GYG1P46976 350 aa19.27■□□□□ 0.68
ACTN4-211ENST00000589528 UBE4AQ14139 1066 aa19.27■□□□□ 0.68
ACTN4-211ENST00000589528 TDRD7Q8NHU6 1098 aaKnown RBP19.27■□□□□ 0.68
ACTN4-211ENST00000589528 OTUD5Q96G74 571 aa19.27■□□□□ 0.68
ACTN4-211ENST00000589528 TMEM39BQ9GZU3 492 aa19.27■□□□□ 0.68
ACTN4-211ENST00000589528 SALL2Q9Y467 1007 aaPredicted RBP19.27■□□□□ 0.68
ACTN4-211ENST00000589528 FRAT2O75474 233 aaPredicted RBP19.26■□□□□ 0.67
ACTN4-211ENST00000589528 CRKP46108 304 aa19.26■□□□□ 0.67
ACTN4-211ENST00000589528 MAP3K9P80192 1104 aa19.26■□□□□ 0.67
ACTN4-211ENST00000589528 EXOSC9Q06265 439 aaKnown RBP19.26■□□□□ 0.67
ACTN4-211ENST00000589528 VGLL4Q14135 290 aa19.26■□□□□ 0.67
ACTN4-211ENST00000589528 KIF22Q14807 665 aa19.26■□□□□ 0.67
ACTN4-211ENST00000589528 EPHA10Q5JZY3 1008 aa19.26■□□□□ 0.67
ACTN4-211ENST00000589528 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.26■□□□□ 0.67
ACTN4-211ENST00000589528 CNKSR2Q8WXI2 1034 aa19.26■□□□□ 0.67
ACTN4-211ENST00000589528 BRI3BPQ8WY22 251 aa19.26■□□□□ 0.67
ACTN4-211ENST00000589528 ZNF333Q96JL9 665 aa19.26■□□□□ 0.67
ACTN4-211ENST00000589528 MS4A4AQ96JQ5 239 aa19.26■□□□□ 0.67
ACTN4-211ENST00000589528 SLC4A10Q6U841 1118 aa19.25■□□□□ 0.67
ACTN4-211ENST00000589528 PTCH2Q9Y6C5 1203 aa19.25■□□□□ 0.67
ACTN4-211ENST00000589528 CHAF1AQ13111 956 aaPredicted RBP19.24■□□□□ 0.67
ACTN4-211ENST00000589528 CDAN1Q8IWY9 1227 aa19.24■□□□□ 0.67
ACTN4-211ENST00000589528 FAM84BQ96KN1 310 aaPredicted RBP19.24■□□□□ 0.67
ACTN4-211ENST00000589528 TEPSINQ96N21 525 aa19.24■□□□□ 0.67
ACTN4-211ENST00000589528 TMOD2Q9NZR1 351 aa19.24■□□□□ 0.67
ACTN4-211ENST00000589528 AK9Q5TCS8 1911 aa19.23■□□□□ 0.67
ACTN4-211ENST00000589528 MYCP01106 439 aaPredicted RBP19.23■□□□□ 0.67
ACTN4-211ENST00000589528 CAP1Q01518 475 aa19.23■□□□□ 0.67
ACTN4-211ENST00000589528 CCDC184Q52MB2 194 aa19.23■□□□□ 0.67
ACTN4-211ENST00000589528 NCBP3Q53F19 620 aaKnown RBP19.23■□□□□ 0.67
ACTN4-211ENST00000589528 WDR63Q8IWG1 891 aa19.23■□□□□ 0.67
ACTN4-211ENST00000589528 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.23■□□□□ 0.671e-21■■□□□ 12.6
ACTN4-211ENST00000589528 SRCIN1Q9C0H9 1055 aa19.23■□□□□ 0.67
ACTN4-211ENST00000589528 IQSEC3Q9UPP2 1182 aaPredicted RBP19.23■□□□□ 0.67
ACTN4-211ENST00000589528 ALDH1L1O75891 902 aa19.22■□□□□ 0.67
ACTN4-211ENST00000589528 CETPP11597 493 aa19.22■□□□□ 0.67
ACTN4-211ENST00000589528 CAVIN4Q5BKX8 364 aa19.22■□□□□ 0.67
ACTN4-211ENST00000589528 FAM43AQ8N2R8 423 aa19.22■□□□□ 0.67
ACTN4-211ENST00000589528 TBC1D22AQ8WUA7 517 aa19.22■□□□□ 0.67
ACTN4-211ENST00000589528 TEKT1Q969V4 418 aa19.22■□□□□ 0.67
ACTN4-211ENST00000589528 HOOK2Q96ED9 719 aa19.22■□□□□ 0.67
ACTN4-211ENST00000589528 MROH5Q6ZUA9 1318 aa19.22■□□□□ 0.67
ACTN4-211ENST00000589528 WRNIP1Q96S55 665 aa19.21■□□□□ 0.67
ACTN4-211ENST00000589528 PUS3Q9BZE2 481 aaKnown RBP19.21■□□□□ 0.67
ACTN4-211ENST00000589528 ZSWIM8A7E2V4 1837 aa19.21■□□□□ 0.67
ACTN4-211ENST00000589528 MYH13Q9UKX3 1938 aa19.2■□□□□ 0.66
ACTN4-211ENST00000589528 SPDYE5A6NIY4 337 aa19.2■□□□□ 0.66
ACTN4-211ENST00000589528 CACNB3P54284 484 aa19.2■□□□□ 0.66
ACTN4-211ENST00000589528 SNAPC2Q13487 334 aa19.2■□□□□ 0.66
ACTN4-211ENST00000589528 ERO1BQ86YB8 467 aa19.2■□□□□ 0.66
ACTN4-211ENST00000589528 TLR2O60603 784 aa19.19■□□□□ 0.66
ACTN4-211ENST00000589528 HDLBPQ00341 1268 aaKnown RBP19.19■□□□□ 0.66
ACTN4-211ENST00000589528 METTL24Q5JXM2 366 aa19.19■□□□□ 0.66
ACTN4-211ENST00000589528 SUCLG2Q96I99 432 aa19.19■□□□□ 0.66
ACTN4-211ENST00000589528 MRS2Q9HD23 443 aa19.19■□□□□ 0.66
ACTN4-211ENST00000589528 MAST3O60307 1309 aa19.19■□□□□ 0.66
ACTN4-211ENST00000589528 BTBD19C9JJ37 291 aa19.18■□□□□ 0.66
ACTN4-211ENST00000589528 FXR1P51114 621 aaKnown RBP eCLIP19.18■□□□□ 0.663e-7■■■■□ 19.8
ACTN4-211ENST00000589528 LACTBP83111 547 aaPredicted RBP19.18■□□□□ 0.66
ACTN4-211ENST00000589528 DCAF15Q66K64 600 aa19.18■□□□□ 0.66
ACTN4-211ENST00000589528 SH3TC2Q8TF17 1288 aa19.18■□□□□ 0.66
ACTN4-211ENST00000589528 ZCCHC17Q9NP64 241 aaKnown RBP19.18■□□□□ 0.66
ACTN4-211ENST00000589528 SNCAIPQ9Y6H5 919 aa19.18■□□□□ 0.66
ACTN4-211ENST00000589528 CEP290O15078 2479 aa19.17■□□□□ 0.66
ACTN4-211ENST00000589528 IRF6O14896 467 aa19.17■□□□□ 0.66
ACTN4-211ENST00000589528 ECM2O94769 699 aaPredicted RBP19.17■□□□□ 0.66
ACTN4-211ENST00000589528 GNRH1P01148 92 aa19.17■□□□□ 0.66
ACTN4-211ENST00000589528 GRIK5Q16478 980 aa19.17■□□□□ 0.66
ACTN4-211ENST00000589528 FBXO33Q7Z6M2 555 aa19.17■□□□□ 0.66
ACTN4-211ENST00000589528 ZKSCAN4Q969J2 545 aaPredicted RBP19.17■□□□□ 0.66
ACTN4-211ENST00000589528 ARHGAP39Q9C0H5 1083 aa19.17■□□□□ 0.66
ACTN4-211ENST00000589528 COLQQ9Y215 455 aaPredicted RBP19.17■□□□□ 0.66
ACTN4-211ENST00000589528 RIPOR2Q9Y4F9 1068 aa19.17■□□□□ 0.66
ACTN4-211ENST00000589528 PRMT2P55345 433 aa19.16■□□□□ 0.66
ACTN4-211ENST00000589528 FAM83AQ86UY5 434 aa19.16■□□□□ 0.66
ACTN4-211ENST00000589528 ZDHHC15Q96MV8 337 aa19.16■□□□□ 0.66
ACTN4-211ENST00000589528 PPIL2Q13356 520 aa19.15■□□□□ 0.66
ACTN4-211ENST00000589528 BICC1Q9H694 974 aaKnown RBP19.15■□□□□ 0.66
ACTN4-211ENST00000589528 NBPF7P0C2Y1 421 aaPredicted RBP19.14■□□□□ 0.65
ACTN4-211ENST00000589528 LRRC24Q50LG9 513 aa19.14■□□□□ 0.65
ACTN4-211ENST00000589528 ZNF341Q9BYN7 854 aa19.14■□□□□ 0.65
ACTN4-211ENST00000589528 PDE8BO95263 885 aa19.13■□□□□ 0.65
ACTN4-211ENST00000589528 IFIT1P09914 478 aaKnown RBP19.13■□□□□ 0.65
ACTN4-211ENST00000589528 HOXD10P28358 340 aa19.13■□□□□ 0.65
ACTN4-211ENST00000589528 ZEB1P37275 1124 aaPredicted RBP19.13■□□□□ 0.65
ACTN4-211ENST00000589528 BCAMP50895 628 aa19.13■□□□□ 0.65
ACTN4-211ENST00000589528 FKBP1CQ5VVH2 108 aa19.13■□□□□ 0.65
ACTN4-211ENST00000589528 MIGA2Q7L4E1 593 aa19.13■□□□□ 0.65
ACTN4-211ENST00000589528 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.13■□□□□ 0.65
ACTN4-211ENST00000589528 RAET1EQ8TD07 263 aa19.13■□□□□ 0.65
ACTN4-211ENST00000589528 KAZALD1Q96I82 304 aa19.13■□□□□ 0.65
ACTN4-211ENST00000589528 MRIQ9BWK5 157 aa19.13■□□□□ 0.65
ACTN4-211ENST00000589528 SUGT1Q9Y2Z0 365 aa19.13■□□□□ 0.65
ACTN4-211ENST00000589528 TRIOBPQ9H2D6 2365 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms