RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 PIH1D3Q9NQM4 214 aaKnown RBP23.13■■□□□ 1.29
CLPTM1-209ENST00000588855 HDAC9Q9UKV0 1011 aa23.13■■□□□ 1.29
CLPTM1-209ENST00000588855 SUGT1Q9Y2Z0 365 aa23.13■■□□□ 1.29
CLPTM1-209ENST00000588855 MYH2Q9UKX2 1941 aa23.12■■□□□ 1.29
CLPTM1-209ENST00000588855 PDE1AP54750 535 aa23.12■■□□□ 1.29
CLPTM1-209ENST00000588855 EDC3Q96F86 508 aaKnown RBP23.12■■□□□ 1.29
CLPTM1-209ENST00000588855 HAUS7Q99871 368 aa23.12■■□□□ 1.29
CLPTM1-209ENST00000588855 MYOZ2Q9NPC6 264 aa23.12■■□□□ 1.29
CLPTM1-209ENST00000588855 STAP2Q9UGK3 403 aa23.12■■□□□ 1.29
CLPTM1-209ENST00000588855 RBM26Q5T8P6 1007 aaKnown RBP23.11■■□□□ 1.29
CLPTM1-209ENST00000588855 ERICH6Q7L0X2 663 aa23.11■■□□□ 1.29
CLPTM1-209ENST00000588855 ECM29Q5VYK3 1845 aa23.1■■□□□ 1.29
CLPTM1-209ENST00000588855 GOLIM4O00461 696 aa23.1■■□□□ 1.29
CLPTM1-209ENST00000588855 KIF3CO14782 793 aa23.1■■□□□ 1.29
CLPTM1-209ENST00000588855 ERC2O15083 957 aa23.1■■□□□ 1.29
CLPTM1-209ENST00000588855 KIF4BQ2VIQ3 1234 aa23.1■■□□□ 1.29
CLPTM1-209ENST00000588855 SPTY2D1Q68D10 685 aaPredicted RBP23.1■■□□□ 1.29
CLPTM1-209ENST00000588855 PLEKHM2Q8IWE5 1019 aa23.1■■□□□ 1.29
CLPTM1-209ENST00000588855 LRP2BPQ9P2M1 347 aa23.1■■□□□ 1.29
CLPTM1-209ENST00000588855 PCDHAC2Q9Y5I4 1007 aa23.1■■□□□ 1.29
CLPTM1-209ENST00000588855 MAST3O60307 1309 aa23.1■■□□□ 1.29
CLPTM1-209ENST00000588855 MYH7P12883 1935 aa23.1■■□□□ 1.29
CLPTM1-209ENST00000588855 GLRX3O76003 335 aaKnown RBP23.09■■□□□ 1.29
CLPTM1-209ENST00000588855 EAPPQ56P03 285 aaPredicted RBP23.09■■□□□ 1.29
CLPTM1-209ENST00000588855 DZIP1Q86YF9 867 aaKnown RBP23.09■■□□□ 1.29
CLPTM1-209ENST00000588855 PAG1Q9NWQ8 432 aa23.09■■□□□ 1.29
CLPTM1-209ENST00000588855 POTEIP0CG38 1075 aa23.08■■□□□ 1.29
CLPTM1-209ENST00000588855 POTEJP0CG39 1038 aa23.08■■□□□ 1.29
CLPTM1-209ENST00000588855 CRKP46108 304 aa23.08■■□□□ 1.29
CLPTM1-209ENST00000588855 MMP14P50281 582 aa23.08■■□□□ 1.29
CLPTM1-209ENST00000588855 HIRAP54198 1017 aaPredicted RBP23.08■■□□□ 1.29
CLPTM1-209ENST00000588855 DIXDC1Q155Q3 683 aa23.08■■□□□ 1.29
CLPTM1-209ENST00000588855 CFAP100Q494V2 611 aa23.08■■□□□ 1.29
CLPTM1-209ENST00000588855 USP50Q70EL3 339 aaPredicted RBP23.08■■□□□ 1.29
CLPTM1-209ENST00000588855 RAI14Q9P0K7 980 aa23.08■■□□□ 1.29
CLPTM1-209ENST00000588855 MECOMQ03112 1051 aa23.08■■□□□ 1.28
CLPTM1-209ENST00000588855 PNMA8AQ86V59 439 aaPredicted RBP23.08■■□□□ 1.28
CLPTM1-209ENST00000588855 ZNF384Q8TF68 577 aa23.08■■□□□ 1.28
CLPTM1-209ENST00000588855 SERPINA10Q9UK55 444 aa23.08■■□□□ 1.28
CLPTM1-209ENST00000588855 AOX1Q06278 1338 aa23.07■■□□□ 1.28
CLPTM1-209ENST00000588855 MAP4K4O95819 1239 aaPredicted RBP23.07■■□□□ 1.28
CLPTM1-209ENST00000588855 TTF1Q15361 905 aaPredicted RBP23.07■■□□□ 1.28
CLPTM1-209ENST00000588855 SKAP1Q86WV1 359 aa23.07■■□□□ 1.28
CLPTM1-209ENST00000588855 TEKT1Q969V4 418 aa23.07■■□□□ 1.28
CLPTM1-209ENST00000588855 NSUN4Q96CB9 384 aaKnown RBP23.07■■□□□ 1.28
CLPTM1-209ENST00000588855 IDH1O75874 414 aaKnown RBP23.06■■□□□ 1.28
CLPTM1-209ENST00000588855 RBM5P52756 815 aaKnown RBP eCLIP23.06■■□□□ 1.28
CLPTM1-209ENST00000588855 HDLBPQ00341 1268 aaKnown RBP23.06■■□□□ 1.28
CLPTM1-209ENST00000588855 DLGAP5Q15398 846 aa23.06■■□□□ 1.28
CLPTM1-209ENST00000588855 ZBED3Q96IU2 234 aaPredicted RBP23.06■■□□□ 1.28
CLPTM1-209ENST00000588855 OSBPL3Q9H4L5 887 aa23.06■■□□□ 1.28
CLPTM1-209ENST00000588855 WNT10BO00744 389 aa23.05■■□□□ 1.28
CLPTM1-209ENST00000588855 NBPF9Q3BBW0 867 aa23.05■■□□□ 1.28
CLPTM1-209ENST00000588855 MTMR14Q8NCE2 650 aa23.05■■□□□ 1.28
CLPTM1-209ENST00000588855 ASTN2O75129 1339 aaPredicted RBP23.05■■□□□ 1.28
CLPTM1-209ENST00000588855 SPDYE2BA6NHP3 402 aa23.04■■□□□ 1.28
CLPTM1-209ENST00000588855 SPDYE6P0CI01 402 aa23.04■■□□□ 1.28
CLPTM1-209ENST00000588855 DAGLAQ9Y4D2 1042 aa23.04■■□□□ 1.28
CLPTM1-209ENST00000588855 AK9Q5TCS8 1911 aa23.04■■□□□ 1.28
CLPTM1-209ENST00000588855 POLR2AP24928 1970 aaKnown RBP23.04■■□□□ 1.28
CLPTM1-209ENST00000588855 HHIPL2Q6UWX4 724 aa23.03■■□□□ 1.28
CLPTM1-209ENST00000588855 PRMT6Q96LA8 375 aaPredicted RBP23.03■■□□□ 1.28
CLPTM1-209ENST00000588855 ZDHHC15Q96MV8 337 aa23.03■■□□□ 1.28
CLPTM1-209ENST00000588855 MRIQ9BWK5 157 aa23.03■■□□□ 1.28
CLPTM1-209ENST00000588855 MROH7-TTC4A0A0A0MT08 1334 aa23.03■■□□□ 1.28
CLPTM1-209ENST00000588855 GAKO14976 1311 aa23.03■■□□□ 1.28
CLPTM1-209ENST00000588855 MAP3K12Q12852 859 aa23.03■■□□□ 1.28
CLPTM1-209ENST00000588855 NAA16Q6N069 864 aaPredicted RBP23.03■■□□□ 1.28
CLPTM1-209ENST00000588855 LDHDQ86WU2 507 aa23.03■■□□□ 1.28
CLPTM1-209ENST00000588855 CLEC11AQ9Y240 323 aa23.03■■□□□ 1.28
CLPTM1-209ENST00000588855 SLF2Q8IX21 1173 aa23.02■■□□□ 1.28
CLPTM1-209ENST00000588855 MAGEB6Q8N7X4 407 aa23.02■■□□□ 1.28
CLPTM1-209ENST00000588855 GSTO1P78417 241 aa23.01■■□□□ 1.27
CLPTM1-209ENST00000588855 APOBEC3HQ6NTF7 200 aaKnown RBP23.01■■□□□ 1.27
CLPTM1-209ENST00000588855 GGA3Q9NZ52 723 aa23.01■■□□□ 1.27
CLPTM1-209ENST00000588855 IGSF3O75054 1194 aa23■■□□□ 1.27
CLPTM1-209ENST00000588855 ADGRA1Q86SQ6 560 aa23■■□□□ 1.27
CLPTM1-209ENST00000588855 KBTBD3Q8NAB2 608 aa23■■□□□ 1.27
CLPTM1-209ENST00000588855 FAM163AQ96GL9 167 aaPredicted RBP23■■□□□ 1.27
CLPTM1-209ENST00000588855 CLRN2A0PK11 232 aa22.99■■□□□ 1.27
CLPTM1-209ENST00000588855 PDE6AP16499 860 aa22.99■■□□□ 1.27
CLPTM1-209ENST00000588855 CYP7A1P22680 504 aa22.99■■□□□ 1.27
CLPTM1-209ENST00000588855 SLC9C2Q5TAH2 1124 aa22.99■■□□□ 1.27
CLPTM1-209ENST00000588855 ANGEL2Q5VTE6 544 aaKnown RBP22.99■■□□□ 1.27
CLPTM1-209ENST00000588855 ZC3H15Q8WU90 426 aaKnown RBP22.99■■□□□ 1.27
CLPTM1-209ENST00000588855 TDRD3Q9H7E2 651 aaKnown RBP22.99■■□□□ 1.27
CLPTM1-209ENST00000588855 PGAP2Q9UHJ9 254 aa22.99■■□□□ 1.27
CLPTM1-209ENST00000588855 CHGBP05060 677 aa22.98■■□□□ 1.27
CLPTM1-209ENST00000588855 LDHCP07864 332 aa22.98■■□□□ 1.27
CLPTM1-209ENST00000588855 BTDP43251 543 aa22.98■■□□□ 1.27
CLPTM1-209ENST00000588855 SLFNL1Q499Z3 407 aa22.98■■□□□ 1.27
CLPTM1-209ENST00000588855 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.98■■□□□ 1.27
CLPTM1-209ENST00000588855 MYO1BO43795 1136 aa22.98■■□□□ 1.27
CLPTM1-209ENST00000588855 TOMM70O94826 608 aa22.98■■□□□ 1.27
CLPTM1-209ENST00000588855 TTC22Q5TAA0 569 aa22.98■■□□□ 1.27
CLPTM1-209ENST00000588855 MAP1SQ66K74 1059 aaPredicted RBP22.98■■□□□ 1.27
CLPTM1-209ENST00000588855 FSD1Q9BTV5 496 aa22.98■■□□□ 1.27
CLPTM1-209ENST00000588855 SCAF8Q9UPN6 1271 aaKnown RBP22.98■■□□□ 1.27
CLPTM1-209ENST00000588855 CDK5RAP2Q96SN8 1893 aa22.97■■□□□ 1.27
CLPTM1-209ENST00000588855 ZNF532Q9HCE3 1301 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms